RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 ADPRHP54922 357 aa20.5■□□□□ 0.87
PNKP-215ENST00000600910 RALGDSQ12967 914 aa20.5■□□□□ 0.87
PNKP-215ENST00000600910 PDIA2Q13087 525 aaKnown RBP20.5■□□□□ 0.87
PNKP-215ENST00000600910 SEPT6Q14141 434 aa20.5■□□□□ 0.87
PNKP-215ENST00000600910 CDKN3Q16667 212 aa20.5■□□□□ 0.87
PNKP-215ENST00000600910 DNAJC21Q5F1R6 531 aaKnown RBP20.5■□□□□ 0.87
PNKP-215ENST00000600910 LRRC66Q68CR7 880 aa20.5■□□□□ 0.87
PNKP-215ENST00000600910 TSSK4Q6SA08 328 aa20.5■□□□□ 0.87
PNKP-215ENST00000600910 CCNI2Q6ZMN8 369 aaPredicted RBP20.5■□□□□ 0.87
PNKP-215ENST00000600910 CENPUQ71F23 418 aa20.5■□□□□ 0.87
PNKP-215ENST00000600910 LYSMD3Q7Z3D4 306 aa20.5■□□□□ 0.87
PNKP-215ENST00000600910 CCDC25Q86WR0 208 aa20.5■□□□□ 0.87
PNKP-215ENST00000600910 C1orf210Q8IVY1 113 aa20.5■□□□□ 0.87
PNKP-215ENST00000600910 OR14C36Q8NHC7 312 aa20.5■□□□□ 0.87
PNKP-215ENST00000600910 SIGLEC10Q96LC7 697 aa20.5■□□□□ 0.87
PNKP-215ENST00000600910 FOXP3Q9BZS1 431 aa20.5■□□□□ 0.87
PNKP-215ENST00000600910 TRABDQ9H4I3 376 aa20.5■□□□□ 0.87
PNKP-215ENST00000600910 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.5■□□□□ 0.87
PNKP-215ENST00000600910 CYP8B1Q9UNU6 501 aa20.5■□□□□ 0.87
PNKP-215ENST00000600910 ARL5AQ9Y689 179 aa20.5■□□□□ 0.87
PNKP-215ENST00000600910 E7ESA3 106 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 CTIFO43310 598 aaKnown RBP20.49■□□□□ 0.87
PNKP-215ENST00000600910 PLRG1O43660 514 aaKnown RBP20.49■□□□□ 0.87
PNKP-215ENST00000600910 AP1G1O43747 822 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 CLDN7O95471 211 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 SLC4A1P02730 911 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 ARHGEF7Q14155 803 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 HP1BP3Q5SSJ5 553 aaPredicted RBP20.49■□□□□ 0.87
PNKP-215ENST00000600910 CASC4Q6P4E1 433 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 DTWD2Q8NBA8 298 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 GPR63Q9BZJ6 419 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 ZFYVE1Q9HBF4 777 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 C11orf16Q9NQ32 467 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 LDB2O43679 373 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 ZNF217O75362 1048 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 CRTAMO95727 393 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 IGLV3-19P01714 112 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 ADRA1DP25100 572 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 MCM3P25205 808 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 TAF1AQ15573 450 aaPredicted RBP20.49■□□□□ 0.87
PNKP-215ENST00000600910 CNGA3Q16281 694 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 PCID2Q5JVF3 399 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 PPHLN1Q8NEY8 458 aaKnown RBP20.49■□□□□ 0.87
PNKP-215ENST00000600910 EID2BQ96D98 161 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 RANBP9Q96S59 729 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 WRAP53Q9BUR4 548 aaKnown RBP20.49■□□□□ 0.87
PNKP-215ENST00000600910 PHACTR1Q9C0D0 580 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 BTBD1Q9H0C5 482 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 SAYSD1Q9NPB0 183 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 CHRAC1Q9NRG0 131 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 TCAF1Q9Y4C2 921 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 MAD1L1Q9Y6D9 718 aa20.49■□□□□ 0.87
PNKP-215ENST00000600910 CACNA1IQ9P0X4 2223 aa20.48■□□□□ 0.87
PNKP-215ENST00000600910 HEATR9A2RTY3 570 aa20.48■□□□□ 0.87
PNKP-215ENST00000600910 AXIN1O15169 862 aa20.48■□□□□ 0.87
PNKP-215ENST00000600910 EIF3HO15372 352 aaKnown RBP eCLIP20.48■□□□□ 0.87
PNKP-215ENST00000600910 TSPAN6O43657 245 aa20.48■□□□□ 0.87
PNKP-215ENST00000600910 BUD23O43709 281 aaKnown RBP20.48■□□□□ 0.87
PNKP-215ENST00000600910 ZNF30P17039 623 aa20.48■□□□□ 0.87
PNKP-215ENST00000600910 AVPR2P30518 371 aa20.48■□□□□ 0.87
PNKP-215ENST00000600910 ACSL1P33121 698 aa20.48■□□□□ 0.87
PNKP-215ENST00000600910 PTSQ03393 145 aa20.48■□□□□ 0.87
PNKP-215ENST00000600910 DMWDQ09019 674 aa20.48■□□□□ 0.87
PNKP-215ENST00000600910 CBLBQ13191 982 aa20.48■□□□□ 0.87
PNKP-215ENST00000600910 FASTKD3Q14CZ7 662 aaKnown RBP20.48■□□□□ 0.87
PNKP-215ENST00000600910 TMEM52BQ4KMG9 183 aa20.48■□□□□ 0.87
PNKP-215ENST00000600910 ANKMY2Q8IV38 441 aa20.48■□□□□ 0.87
PNKP-215ENST00000600910 ZBED8Q8IZ13 594 aa20.48■□□□□ 0.87
PNKP-215ENST00000600910 TTC30BQ8N4P2 665 aa20.48■□□□□ 0.87
PNKP-215ENST00000600910 RLN3Q8WXF3 142 aa20.48■□□□□ 0.87
PNKP-215ENST00000600910 LRRC39Q96DD0 335 aa20.48■□□□□ 0.87
PNKP-215ENST00000600910 WDR83Q9BRX9 315 aaKnown RBP20.48■□□□□ 0.87
PNKP-215ENST00000600910 SAMD15Q9P1V8 674 aa20.48■□□□□ 0.87
PNKP-215ENST00000600910 RAB21Q9UL25 225 aa20.48■□□□□ 0.87
PNKP-215ENST00000600910 KCTD3Q9Y597 815 aa20.48■□□□□ 0.87
PNKP-215ENST00000600910 TEX264Q9Y6I9 313 aa20.48■□□□□ 0.87
PNKP-215ENST00000600910 CCDC78A2IDD5 438 aa20.47■□□□□ 0.87
PNKP-215ENST00000600910 FAM47DPA6NHR8 397 aa20.47■□□□□ 0.87
PNKP-215ENST00000600910 C2orf81A6NN90 581 aa20.47■□□□□ 0.87
PNKP-215ENST00000600910 H0Y858 1186 aa20.47■□□□□ 0.87
PNKP-215ENST00000600910 PCDH8O95206 1070 aa20.47■□□□□ 0.87
PNKP-215ENST00000600910 FAM153BP0C7A2 387 aa20.47■□□□□ 0.87
PNKP-215ENST00000600910 ELFN1P0C7U0 828 aa20.47■□□□□ 0.87
PNKP-215ENST00000600910 HOXA6P31267 233 aa20.47■□□□□ 0.87
PNKP-215ENST00000600910 ELK3P41970 407 aa20.47■□□□□ 0.87
PNKP-215ENST00000600910 LIG3P49916 1009 aa20.47■□□□□ 0.87
PNKP-215ENST00000600910 FAM153CQ494X1 144 aa20.47■□□□□ 0.87
PNKP-215ENST00000600910 LIPIQ6XZB0 460 aa20.47■□□□□ 0.87
PNKP-215ENST00000600910 TMC3Q7Z5M5 1100 aa20.47■□□□□ 0.87
PNKP-215ENST00000600910 IGDCC3Q8IVU1 814 aa20.47■□□□□ 0.87
PNKP-215ENST00000600910 MAML2Q8IZL2 1156 aaPredicted RBP20.47■□□□□ 0.87
PNKP-215ENST00000600910 FRMD1Q8N878 549 aa20.47■□□□□ 0.87
PNKP-215ENST00000600910 CXorf40AQ8TE69 158 aa20.47■□□□□ 0.87
PNKP-215ENST00000600910 STAMBPL1Q96FJ0 436 aa20.47■□□□□ 0.87
PNKP-215ENST00000600910 ZNF778Q96MU6 729 aa20.47■□□□□ 0.87
PNKP-215ENST00000600910 TRIM56Q9BRZ2 755 aaKnown RBP20.47■□□□□ 0.87
PNKP-215ENST00000600910 TSPYL1Q9H0U9 437 aa20.47■□□□□ 0.87
PNKP-215ENST00000600910 SGK2Q9HBY8 427 aa20.47■□□□□ 0.87
PNKP-215ENST00000600910 SOX13Q9UN79 622 aa20.47■□□□□ 0.87
PNKP-215ENST00000600910 CHMP2BQ9UQN3 213 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms