RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 LINC00523Q86TU6 105 aa20.06■□□□□ 0.8
SHKBP1-222ENST00000600320 SLC41A1Q8IVJ1 513 aa20.06■□□□□ 0.8
SHKBP1-222ENST00000600320 PPIL6Q8IXY8 311 aa20.06■□□□□ 0.8
SHKBP1-222ENST00000600320 TMEFF1Q8IYR6 380 aa20.06■□□□□ 0.8
SHKBP1-222ENST00000600320 KLK6Q92876 244 aa20.06■□□□□ 0.8
SHKBP1-222ENST00000600320 MAGEE1Q9HCI5 957 aa20.06■□□□□ 0.8
SHKBP1-222ENST00000600320 RRAGDQ9NQL2 400 aaPredicted RBP20.06■□□□□ 0.8
SHKBP1-222ENST00000600320 SHOC2Q9UQ13 582 aa20.06■□□□□ 0.8
SHKBP1-222ENST00000600320 COQ6Q9Y2Z9 468 aa20.06■□□□□ 0.8
SHKBP1-222ENST00000600320 ZNF711Q9Y462 761 aa20.06■□□□□ 0.8
SHKBP1-222ENST00000600320 PCDHGA2Q9Y5H1 932 aa20.06■□□□□ 0.8
SHKBP1-222ENST00000600320 R4GN57 208 aa20.06■□□□□ 0.8
SHKBP1-222ENST00000600320 ABCA7Q8IZY2 2146 aa20.06■□□□□ 0.8
SHKBP1-222ENST00000600320 IGLON5A6NGN9 336 aa20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 GOLGA8MH3BSY2 632 aa20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 MAP3K13O43283 966 aa20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 SEC31AO94979 1220 aaKnown RBP20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 CLDN7O95471 211 aa20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 IGHV4-34P06331 123 aa20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 C1SP09871 688 aa20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 MAT2AP31153 395 aaKnown RBP20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 LIG3P49916 1009 aa20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 ITGA8P53708 1063 aa20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 CDK16Q00536 496 aa20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 MTM1Q13496 603 aa20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 TMEM259Q4ZIN3 620 aa20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 HIBCHQ6NVY1 386 aaPredicted RBP20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 NEK5Q6P3R8 708 aa20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 RFLNAQ6ZTI6 216 aa20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 HSD11B1LQ7Z5J1 315 aa20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 HORMAD1Q86X24 394 aa20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 CBARPQ8N350 705 aaPredicted RBP20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 TTC30BQ8N4P2 665 aa20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 BLOC1S5Q8TDH9 187 aa20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 CXorf40AQ8TE69 158 aa20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 EID2BQ96D98 161 aa20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 SNF8Q96H20 258 aa20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 DMGDHQ9UI17 866 aaKnown RBP20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 LRRK1Q38SD2 2015 aa20.05■□□□□ 0.8
SHKBP1-222ENST00000600320 MYLKQ15746 1914 aa20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 FANCMQ8IYD8 2048 aa20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 C1orf232A0A0U1RR37 186 aa20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 GOLGA8CPA6NN73 597 aa20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 METTL12A8MUP2 240 aa20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 BHMG1C9JSJ3 638 aaPredicted RBP20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 FSBPO95073 299 aa20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 C6P13671 934 aa20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 NFKBIAP25963 317 aa20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 CNR2P34972 360 aa20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 STC1P52823 247 aa20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 PTSQ03393 145 aa20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 CDH17Q12864 832 aa20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 ZNF284Q2VY69 593 aa20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 PLK5Q496M5 336 aa20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 DENND2CQ68D51 928 aa20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 KIAA1161Q6NSJ0 714 aa20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 CAND1Q86VP6 1230 aaKnown RBP20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 TRIM69Q86WT6 500 aa20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 DNAAF3Q8N9W5 541 aa20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 MCUQ8NE86 351 aa20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 BIRC7Q96CA5 298 aa20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 RAB17Q9H0T7 212 aa20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 DUSP15Q9H1R2 295 aaPredicted RBP20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 EBF2Q9HAK2 575 aa20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 GRHL1Q9NZI5 618 aa20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 UTP11Q9Y3A2 253 aaKnown RBP20.04■□□□□ 0.8
SHKBP1-222ENST00000600320 DOCK9Q9BZ29 2069 aa20.03■□□□□ 0.8
SHKBP1-222ENST00000600320 ESYT3A0FGR9 886 aa20.03■□□□□ 0.8
SHKBP1-222ENST00000600320 SLC4A1P02730 911 aa20.03■□□□□ 0.8
SHKBP1-222ENST00000600320 ELFN1P0C7U0 828 aa20.03■□□□□ 0.8
SHKBP1-222ENST00000600320 CCR5P51681 352 aa20.03■□□□□ 0.8
SHKBP1-222ENST00000600320 SESN2P58004 480 aaPredicted RBP20.03■□□□□ 0.8
SHKBP1-222ENST00000600320 RPS21P63220 83 aaKnown RBP20.03■□□□□ 0.8
SHKBP1-222ENST00000600320 ARHGEF7Q14155 803 aa20.03■□□□□ 0.8
SHKBP1-222ENST00000600320 CERCAMQ5T4B2 595 aa20.03■□□□□ 0.8
SHKBP1-222ENST00000600320 PMS2CLQ68D20 193 aa20.03■□□□□ 0.8
SHKBP1-222ENST00000600320 LRRC8BQ6P9F7 803 aa20.03■□□□□ 0.8
SHKBP1-222ENST00000600320 CEP68Q76N32 757 aa20.03■□□□□ 0.8
SHKBP1-222ENST00000600320 ARMCX6Q7L4S7 300 aa20.03■□□□□ 0.8
SHKBP1-222ENST00000600320 TMC3Q7Z5M5 1100 aa20.03■□□□□ 0.8
SHKBP1-222ENST00000600320 PCGF5Q86SE9 256 aa20.03■□□□□ 0.8
SHKBP1-222ENST00000600320 CADM4Q8NFZ8 388 aa20.03■□□□□ 0.8
SHKBP1-222ENST00000600320 COQ10AQ96MF6 247 aa20.03■□□□□ 0.8
SHKBP1-222ENST00000600320 HSPA12BQ96MM6 686 aa20.03■□□□□ 0.8
SHKBP1-222ENST00000600320 PWWP2AQ96N64 755 aa20.03■□□□□ 0.8
SHKBP1-222ENST00000600320 PRRX2Q99811 253 aa20.03■□□□□ 0.8
SHKBP1-222ENST00000600320 ORAI3Q9BRQ5 295 aa20.03■□□□□ 0.8
SHKBP1-222ENST00000600320 C1QTNF2Q9BXJ5 285 aa20.03■□□□□ 0.8
SHKBP1-222ENST00000600320 PCED1AQ9H1Q7 454 aa20.03■□□□□ 0.8
SHKBP1-222ENST00000600320 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.03■□□□□ 0.8
SHKBP1-222ENST00000600320 TRPM6Q9BX84 2022 aa20.02■□□□□ 0.8
SHKBP1-222ENST00000600320 LATO43561 262 aa20.02■□□□□ 0.8
SHKBP1-222ENST00000600320 BUD23O43709 281 aaKnown RBP20.02■□□□□ 0.8
SHKBP1-222ENST00000600320 AVILO75366 819 aa20.02■□□□□ 0.8
SHKBP1-222ENST00000600320 TM7SF2O76062 418 aa20.02■□□□□ 0.8
SHKBP1-222ENST00000600320 PTGER3P43115 390 aa20.02■□□□□ 0.8
SHKBP1-222ENST00000600320 SIM2Q14190 667 aaPredicted RBP20.02■□□□□ 0.8
SHKBP1-222ENST00000600320 PTPRCAPQ14761 206 aa20.02■□□□□ 0.8
SHKBP1-222ENST00000600320 POU6F1Q14863 301 aa20.02■□□□□ 0.8
SHKBP1-222ENST00000600320 MORF4L2Q15014 288 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms