RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 PACSIN2Q9UNF0 486 aaPredicted RBP13.84□□□□□ -0.19
IRF3-225ENST00000600022 MYO18BQ8IUG5 2567 aa13.84□□□□□ -0.19
IRF3-225ENST00000600022 AGRPO00253 132 aa13.83□□□□□ -0.2
IRF3-225ENST00000600022 PGRMC1O00264 195 aaKnown RBP13.83□□□□□ -0.2
IRF3-225ENST00000600022 NEMP1O14524 444 aa13.83□□□□□ -0.2
IRF3-225ENST00000600022 AREL1O15033 823 aa13.83□□□□□ -0.2
IRF3-225ENST00000600022 INSIG1O15503 277 aa13.83□□□□□ -0.2
IRF3-225ENST00000600022 TSPAN6O43657 245 aa13.83□□□□□ -0.2
IRF3-225ENST00000600022 LZTS3O60299 673 aaPredicted RBP13.83□□□□□ -0.2
IRF3-225ENST00000600022 TSHRP16473 764 aa13.83□□□□□ -0.2
IRF3-225ENST00000600022 GPD1P21695 349 aa13.83□□□□□ -0.2
IRF3-225ENST00000600022 CTNNA2P26232 953 aa13.83□□□□□ -0.2
IRF3-225ENST00000600022 RWDD2BP57060 319 aa13.83□□□□□ -0.2
IRF3-225ENST00000600022 VAC14Q08AM6 782 aa13.83□□□□□ -0.2
IRF3-225ENST00000600022 SRSF6Q13247 344 aaKnown RBP13.83□□□□□ -0.2
IRF3-225ENST00000600022 ZNF805Q5CZA5 627 aa13.83□□□□□ -0.2
IRF3-225ENST00000600022 TEX35Q5T0J7 233 aa13.83□□□□□ -0.2
IRF3-225ENST00000600022 BROXQ5VW32 411 aa13.83□□□□□ -0.2
IRF3-225ENST00000600022 RWDD4Q6NW29 188 aaKnown RBP13.83□□□□□ -0.2
IRF3-225ENST00000600022 ZNF783Q6ZMS7 281 aa13.83□□□□□ -0.2
IRF3-225ENST00000600022 B3GNT8Q7Z7M8 397 aa13.83□□□□□ -0.2
IRF3-225ENST00000600022 TTC7BQ86TV6 843 aa13.83□□□□□ -0.2
IRF3-225ENST00000600022 SFTPA2Q8IWL1 248 aa13.83□□□□□ -0.2
IRF3-225ENST00000600022 CCDC185Q8N715 623 aa13.83□□□□□ -0.2
IRF3-225ENST00000600022 RXFP2Q8WXD0 754 aa13.83□□□□□ -0.2
IRF3-225ENST00000600022 IL12RB2Q99665 862 aa13.83□□□□□ -0.2
IRF3-225ENST00000600022 WRAP53Q9BUR4 548 aaKnown RBP13.83□□□□□ -0.2
IRF3-225ENST00000600022 LRRC61Q9BV99 259 aa13.83□□□□□ -0.2
IRF3-225ENST00000600022 NOL6Q9H6R4 1146 aaKnown RBP13.83□□□□□ -0.2
IRF3-225ENST00000600022 USP29Q9HBJ7 922 aa13.83□□□□□ -0.2
IRF3-225ENST00000600022 PPARGC1AQ9UBK2 798 aaKnown RBP13.83□□□□□ -0.2
IRF3-225ENST00000600022 COQ6Q9Y2Z9 468 aa13.83□□□□□ -0.2
IRF3-225ENST00000600022 HECTD1Q9ULT8 2610 aa13.83□□□□□ -0.2
IRF3-225ENST00000600022 GOLGA6L10A0A0M3HER8 536 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 CDRT15L2A8MXV6 281 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 J3QKU1 62 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 ZNF185O15231 689 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 PSTPIP1O43586 416 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 LRIG2O94898 1065 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 TNFSF15O95150 251 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 TUBBP07437 444 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 TIMP2P16035 220 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 PSMA2P25787 234 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 SDC4P31431 198 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 CTNNA1P35221 906 aaKnown RBP13.82□□□□□ -0.2
IRF3-225ENST00000600022 PTPN9P43378 593 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 CLN3Q13286 438 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 NR0B2Q15466 257 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 TGIF1Q15583 401 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 RBM44Q6ZP01 1051 aaKnown RBP13.82□□□□□ -0.2
IRF3-225ENST00000600022 CPNE8Q86YQ8 564 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 CREG2Q8IUH2 290 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 RHOT1Q8IXI2 618 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 PHACTR4Q8IZ21 702 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 PYROXD2Q8N2H3 581 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 FAM174AQ8TBP5 190 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 ACTRT1Q8TDG2 376 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 COG1Q8WTW3 980 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 SNRNP27Q8WVK2 155 aaKnown RBP13.82□□□□□ -0.2
IRF3-225ENST00000600022 TSACCQ96A04 125 aaPredicted RBP13.82□□□□□ -0.2
IRF3-225ENST00000600022 ISG20Q96AZ6 181 aaKnown RBP13.82□□□□□ -0.2
IRF3-225ENST00000600022 NCAPGQ9BPX3 1015 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 CCDC3Q9BQI4 270 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 CNPY3Q9BT09 278 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 DPH1Q9BZG8 443 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 THSD1Q9NS62 852 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 APOBEC3BQ9UH17 382 aaKnown RBP13.82□□□□□ -0.2
IRF3-225ENST00000600022 MAST4O15021 2626 aa13.82□□□□□ -0.2
IRF3-225ENST00000600022 COL6A6A6NMZ7 2263 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 LMO7DNF2Z398 122 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 H3BM21 787 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 TPP1O14773 563 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 DDX3YO15523 660 aaKnown RBP13.81□□□□□ -0.2
IRF3-225ENST00000600022 RNF8O76064 485 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 HGFP14210 728 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 MCM3P25205 808 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 RBMS1P29558 406 aaKnown RBP13.81□□□□□ -0.2
IRF3-225ENST00000600022 RHDQ02161 417 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 PPP2R5EQ16537 467 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 HADHQ16836 314 aaKnown RBP13.81□□□□□ -0.2
IRF3-225ENST00000600022 ZFYVE27Q5T4F4 411 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 FAXCQ5TGI0 409 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 LRRC38Q5VT99 294 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 IGF2-ASQ6U949 168 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 GDPD4Q6W3E5 623 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 ZNF572Q7Z3I7 529 aaPredicted RBP13.81□□□□□ -0.2
IRF3-225ENST00000600022 PLPP6Q8IY26 295 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 TP53I13Q8NBR0 393 aaPredicted RBP13.81□□□□□ -0.2
IRF3-225ENST00000600022 OR2AP1Q8NGE2 309 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 MAIP1Q8WWC4 291 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 ASB12Q8WXK4 309 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 FOXP3Q9BZS1 431 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 SYNDIG1Q9H7V2 258 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 ARGLU1Q9NWB6 273 aaPredicted RBP13.81□□□□□ -0.2
IRF3-225ENST00000600022 TMEM248Q9NWD8 314 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 SIRPGQ9P1W8 387 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 SPASTQ9UBP0 616 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 GULP1Q9UBP9 304 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 PADI4Q9UM07 663 aa13.81□□□□□ -0.2
IRF3-225ENST00000600022 PCDHA3Q9Y5H8 950 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms