RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 ADI1Q9BV57 179 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 FSD1LQ9BXM9 530 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 RNF39Q9H2S5 420 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 CYP4F12Q9HCS2 524 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 ATP13A1Q9HD20 1204 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 RNF19AQ9NV58 838 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 GID8Q9NWU2 228 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 FAF1Q9UNN5 650 aaPredicted RBP13.29□□□□□ -0.28
VRK3-209ENST00000594948 FIS1Q9Y3D6 152 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 IPPQ9Y573 584 aa13.29□□□□□ -0.28
VRK3-209ENST00000594948 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.28□□□□□ -0.28
VRK3-209ENST00000594948 DHRS12A0PJE2 317 aa13.28□□□□□ -0.28
VRK3-209ENST00000594948 TRIM64BA6NI03 449 aa13.28□□□□□ -0.28
VRK3-209ENST00000594948 DFFAO00273 331 aa13.28□□□□□ -0.28
VRK3-209ENST00000594948 SLC7A4O43246 635 aa13.28□□□□□ -0.28
VRK3-209ENST00000594948 HLA-DQB2P05538 268 aa13.28□□□□□ -0.28
VRK3-209ENST00000594948 HDCP19113 662 aa13.28□□□□□ -0.28
VRK3-209ENST00000594948 FASP25445 335 aa13.28□□□□□ -0.28
VRK3-209ENST00000594948 PSMA4P25789 261 aaKnown RBP13.28□□□□□ -0.28
VRK3-209ENST00000594948 GRIA3P42263 894 aa13.28□□□□□ -0.28
VRK3-209ENST00000594948 UGT3A2Q3SY77 523 aa13.28□□□□□ -0.28
VRK3-209ENST00000594948 TBCELQ5QJ74 424 aa13.28□□□□□ -0.28
VRK3-209ENST00000594948 TMTC4Q5T4D3 741 aa13.28□□□□□ -0.28
VRK3-209ENST00000594948 TTC33Q6PID6 262 aaPredicted RBP13.28□□□□□ -0.28
VRK3-209ENST00000594948 KDELC1Q6UW63 502 aa13.28□□□□□ -0.28
VRK3-209ENST00000594948 SMG8Q8ND04 991 aaKnown RBP13.28□□□□□ -0.28
VRK3-209ENST00000594948 SEPT8Q92599 483 aa13.28□□□□□ -0.28
VRK3-209ENST00000594948 CENPNQ96H22 339 aaPredicted RBP13.28□□□□□ -0.28
VRK3-209ENST00000594948 PCED1BQ96HM7 432 aa13.28□□□□□ -0.28
VRK3-209ENST00000594948 SENP8Q96LD8 212 aa13.28□□□□□ -0.28
VRK3-209ENST00000594948 MYRFLQ96LU7 910 aa13.28□□□□□ -0.28
VRK3-209ENST00000594948 SMOXQ9NWM0 555 aa13.28□□□□□ -0.28
VRK3-209ENST00000594948 ZNF510Q9Y2H8 683 aa13.28□□□□□ -0.28
VRK3-209ENST00000594948 A0A0J9YYE9 177 aa13.27□□□□□ -0.28
VRK3-209ENST00000594948 TTC24A2A3L6 582 aaPredicted RBP13.27□□□□□ -0.28
VRK3-209ENST00000594948 NME4O00746 187 aa13.27□□□□□ -0.28
VRK3-209ENST00000594948 UBFD1O14562 309 aaKnown RBP13.27□□□□□ -0.28
VRK3-209ENST00000594948 PTGESO14684 152 aa13.27□□□□□ -0.28
VRK3-209ENST00000594948 SNAI1O95863 264 aaPredicted RBP13.27□□□□□ -0.28
VRK3-209ENST00000594948 ALDOCP09972 364 aaKnown RBP13.27□□□□□ -0.28
VRK3-209ENST00000594948 SMIM10L2AP0DMW4 78 aa13.27□□□□□ -0.28
VRK3-209ENST00000594948 SMIM10L2BP0DMW5 78 aa13.27□□□□□ -0.28
VRK3-209ENST00000594948 SMPD1P17405 629 aa13.27□□□□□ -0.28
VRK3-209ENST00000594948 HMOX2P30519 316 aa13.27□□□□□ -0.28
VRK3-209ENST00000594948 NRG1Q02297 640 aaPredicted RBP13.27□□□□□ -0.28
VRK3-209ENST00000594948 UNC50Q53HI1 259 aa13.27□□□□□ -0.28
VRK3-209ENST00000594948 IQSEC1Q6DN90 963 aa13.27□□□□□ -0.28
VRK3-209ENST00000594948 ARHGAP36Q6ZRI8 547 aa13.27□□□□□ -0.28
VRK3-209ENST00000594948 RETREG3Q86VR2 466 aa13.27□□□□□ -0.28
VRK3-209ENST00000594948 CLVS1Q8IUQ0 354 aaPredicted RBP13.27□□□□□ -0.28
VRK3-209ENST00000594948 EPHX4Q8IUS5 362 aa13.27□□□□□ -0.28
VRK3-209ENST00000594948 MIER2Q8N344 545 aa13.27□□□□□ -0.28
VRK3-209ENST00000594948 CBR4Q8N4T8 237 aa13.27□□□□□ -0.28
VRK3-209ENST00000594948 KLHL23Q8NBE8 558 aa13.27□□□□□ -0.28
VRK3-209ENST00000594948 GRIN3AQ8TCU5 1115 aa13.27□□□□□ -0.28
VRK3-209ENST00000594948 DQX1Q8TE96 717 aaKnown RBP13.27□□□□□ -0.28
VRK3-209ENST00000594948 SLC39A8Q9C0K1 460 aa13.27□□□□□ -0.28
VRK3-209ENST00000594948 SLC38A7Q9NVC3 462 aa13.27□□□□□ -0.28
VRK3-209ENST00000594948 OSER1Q9NX31 292 aa13.27□□□□□ -0.28
VRK3-209ENST00000594948 TMEM9Q9P0T7 183 aa13.27□□□□□ -0.28
VRK3-209ENST00000594948 MAP10Q9P2G4 905 aa13.27□□□□□ -0.28
VRK3-209ENST00000594948 VWA7Q9Y334 891 aa13.27□□□□□ -0.28
VRK3-209ENST00000594948 NLRC5Q86WI3 1866 aa13.27□□□□□ -0.28
VRK3-209ENST00000594948 TRIP12Q14669 1992 aaPredicted RBP13.27□□□□□ -0.29
VRK3-209ENST00000594948 DOCK4Q8N1I0 1966 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 KANSL1LA0AUZ9 987 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 MYBPHLA2RUH7 354 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 ZSCAN9O15535 394 aaPredicted RBP13.27□□□□□ -0.29
VRK3-209ENST00000594948 VPS4BO75351 444 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 RASAL1O95294 804 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 UMPSP11172 480 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 DCKP27707 260 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 CCT8P50990 548 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 HERVK_113P63132 956 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 PLOD1Q02809 727 aaPredicted RBP13.27□□□□□ -0.29
VRK3-209ENST00000594948 TMED1Q13445 227 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 SEPT6Q14141 434 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 LAYNQ6UX15 382 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 SULF1Q8IWU6 871 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 SLC15A3Q8IY34 581 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 SMYD1Q8NB12 490 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 ARRDC4Q8NCT1 418 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 PAPD5Q8NDF8 572 aaKnown RBP13.27□□□□□ -0.29
VRK3-209ENST00000594948 TRPV3Q8NET8 790 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 GPRC5AQ8NFJ5 357 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 OR9I1Q8NGQ6 314 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 PNPT1Q8TCS8 783 aaKnown RBP13.27□□□□□ -0.29
VRK3-209ENST00000594948 EDEM1Q92611 657 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 RNF34Q969K3 372 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 C12orf43Q96C57 262 aaKnown RBP13.27□□□□□ -0.29
VRK3-209ENST00000594948 DCPSQ96C86 337 aaKnown RBP13.27□□□□□ -0.29
VRK3-209ENST00000594948 ZNF419Q96HQ0 510 aaPredicted RBP13.27□□□□□ -0.29
VRK3-209ENST00000594948 TUBA1CQ9BQE3 449 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 NPLQ9BXD5 320 aaPredicted RBP13.27□□□□□ -0.29
VRK3-209ENST00000594948 ERVK-6Q9BXR3 956 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 UNKQ9C0B0 810 aaKnown RBP13.27□□□□□ -0.29
VRK3-209ENST00000594948 SLC25A51Q9H1U9 297 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 MFSD1Q9H3U5 465 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 POPDC3Q9HBV1 291 aa13.27□□□□□ -0.29
VRK3-209ENST00000594948 RBM22Q9NW64 420 aaKnown RBP eCLIP13.27□□□□□ -0.294e-6■■■■□ 24.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms