RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 ZNF644Q9H582 1327 aaPredicted RBP5.12□□□□□ -1.59
SMAD4-216ENST00000593223 NOS1P29475 1434 aa5.12□□□□□ -1.59
SMAD4-216ENST00000593223 CROCC2H7BZ55 1655 aa5.12□□□□□ -1.59
SMAD4-216ENST00000593223 CCDC196A0A1B0GTZ2 297 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 A0A1B0GVT2 93 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 OR6C75A6NL08 312 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 I6L893 689 aaPredicted RBP5.11□□□□□ -1.59
SMAD4-216ENST00000593223 IGHDP01880 384 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 ALPLP05186 524 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 TPM2P07951 284 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 UBA7P41226 1012 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 CDKN2AP42771 156 aaKnown RBP5.11□□□□□ -1.59
SMAD4-216ENST00000593223 YWHAZP63104 245 aaKnown RBP5.11□□□□□ -1.59
SMAD4-216ENST00000593223 RPP30P78346 268 aaKnown RBP5.11□□□□□ -1.59
SMAD4-216ENST00000593223 TRAF1Q13077 416 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 CAPSQ13938 189 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 RUNX2Q13950 521 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 SMC1AQ14683 1233 aaKnown RBP5.11□□□□□ -1.59
SMAD4-216ENST00000593223 SLC15A2Q16348 729 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 SPATA1Q5VX52 437 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 FAAH2Q6GMR7 532 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 C4orf50Q6ZRC1 276 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 FAM83HQ6ZRV2 1179 aaPredicted RBP5.11□□□□□ -1.59
SMAD4-216ENST00000593223 Q6ZSV7 163 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 MOB3CQ70IA8 216 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 SNX32Q86XE0 403 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 PELI3Q8N2H9 469 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 ESX1Q8N693 406 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 MIGA1Q8NAN2 632 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 HTRA1Q92743 480 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 TMEM18Q96B42 140 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 RNF183Q96D59 192 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 ZBTB10Q96DT7 871 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 ELP4Q96EB1 424 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 URB1-AS1Q96HZ7 61 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 IWS1Q96ST2 819 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 WACQ9BTA9 647 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 XPO4Q9C0E2 1151 aaKnown RBP5.11□□□□□ -1.59
SMAD4-216ENST00000593223 NPFFR1Q9GZQ6 430 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 TTYH1Q9H313 450 aaPredicted RBP5.11□□□□□ -1.59
SMAD4-216ENST00000593223 MVB12BQ9H7P6 319 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 SMYD2Q9NRG4 433 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 TBC1D22BQ9NU19 505 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 BABAM1Q9NWV8 329 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 SLC13A4Q9UKG4 626 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 PTGDR2Q9Y5Y4 395 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 DHX57Q6P158 1386 aaKnown RBP5.11□□□□□ -1.59
SMAD4-216ENST00000593223 ABCC5O15440 1437 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 ADAMTS13Q76LX8 1427 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 TRPM2O94759 1503 aa5.11□□□□□ -1.59
SMAD4-216ENST00000593223 TRIM64CA6NLI5 447 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 KDM4EB2RXH2 506 aaPredicted RBP5.1□□□□□ -1.59
SMAD4-216ENST00000593223 VWA5AO00534 786 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 SPTLC2O15270 562 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 SPRY3O43610 288 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 ITM2AO43736 263 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 ATP2C2O75185 946 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 MBD4O95243 580 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 TFPIP10646 304 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 CTPS1P17812 591 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 CAPN3P20807 821 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 CTNNA1P35221 906 aaKnown RBP5.1□□□□□ -1.59
SMAD4-216ENST00000593223 GGT5P36269 586 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 ANP32AP39687 249 aaKnown RBP5.1□□□□□ -1.59
SMAD4-216ENST00000593223 MLH1P40692 756 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 LIFRP42702 1097 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 RAD52P43351 418 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 BLKP51451 505 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 LBX1P52954 281 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 PMS2P54278 862 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 SLC18A2Q05940 514 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 GALNT2Q10471 571 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 GPS2Q13227 327 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 PLCH1Q4KWH8 1693 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 LRCH2Q5VUJ6 765 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 NAA35Q5VZE5 725 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 CES5AQ6NT32 575 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 CCDC73Q6ZRK6 1079 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 MON1BQ7L1V2 547 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 EGFL6Q8IUX8 553 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 TEX9Q8N6V9 391 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 APPL2Q8NEU8 664 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 ZMIZ2Q8NF64 920 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 KIF1BPQ96EK5 621 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 SPAG5Q96R06 1193 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 DCLK3Q9C098 648 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 SPATS2LQ9NUQ6 558 aaKnown RBP5.1□□□□□ -1.59
SMAD4-216ENST00000593223 PLK2Q9NYY3 685 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 PDP2Q9P2J9 529 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.1□□□□□ -1.59
SMAD4-216ENST00000593223 GJD2Q9UKL4 321 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 MYO6Q9UM54 1294 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 CRYL1Q9Y2S2 319 aa5.1□□□□□ -1.59
SMAD4-216ENST00000593223 CUL9Q8IWT3 2517 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 THSD7AQ9UPZ6 1657 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 USP32Q8NFA0 1604 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 PXDNQ92626 1479 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 ZFYVE9O95405 1425 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 PIK3R4Q99570 1358 aa5.09□□□□□ -1.59
SMAD4-216ENST00000593223 GOLGA6L10A0A0M3HER8 536 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms