RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 EBF1Q9UH73 591 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 IL36AQ9UHA7 158 aa11.99□□□□□ -0.49
DDX39A-219ENST00000592927 EVLQ9UI08 416 aaPredicted RBP11.99□□□□□ -0.49
DDX39A-219ENST00000592927 MUC22E2RYF6 1773 aaPredicted RBP11.99□□□□□ -0.49
DDX39A-219ENST00000592927 E7EVH7 732 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 C1QTNF3-AMACRE9PGA6 284 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 METTL18O95568 372 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 DNTTP04053 509 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 PRNPP04156 253 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 ACADMP11310 421 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 ENGP17813 658 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 NDUFV2P19404 249 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 PSMD8P48556 350 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 DHPSP49366 369 aaPredicted RBP11.98□□□□□ -0.49
DDX39A-219ENST00000592927 ARL4CP56559 192 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 RPS14P62263 151 aaKnown RBP11.98□□□□□ -0.49
DDX39A-219ENST00000592927 ZBTB16Q05516 673 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 ITKQ08881 620 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 PRPSAP1Q14558 356 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 CST6Q15828 149 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 KCTD19Q17RG1 926 aaPredicted RBP11.98□□□□□ -0.49
DDX39A-219ENST00000592927 ARSIQ5FYB1 569 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 CFAP58Q5T655 872 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 FAM46CQ5VWP2 391 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 ALS2CLQ60I27 953 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 CENPUQ71F23 418 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 SRLQ86TD4 932 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 RASSF3Q86WH2 238 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 CACUL1Q86Y37 369 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 ZNF843Q8N446 348 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 CHST14Q8NCH0 376 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 OR6K2Q8NGY2 324 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 GRIN3AQ8TCU5 1115 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 MGME1Q9BQP7 344 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 POLR1EQ9GZS1 481 aaKnown RBP11.98□□□□□ -0.49
DDX39A-219ENST00000592927 SLC6A17Q9H1V8 727 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 GBA3Q9H227 469 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 ZDHHC6Q9H6R6 413 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 MBD1Q9UIS9 605 aaPredicted RBP11.98□□□□□ -0.49
DDX39A-219ENST00000592927 PPM1HQ9ULR3 514 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 TTLL3Q9Y4R7 772 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 ATG2BQ96BY7 2078 aa11.98□□□□□ -0.49
DDX39A-219ENST00000592927 E7ESA3 106 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 AP3B1O00203 1094 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 MUSKO15146 869 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 ATXN7O15265 892 aaPredicted RBP11.97□□□□□ -0.49
DDX39A-219ENST00000592927 LEFTY1O75610 366 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 ADH1BP00325 375 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 HLA-DQB2P05538 268 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 APRTP07741 180 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 MLNP12872 115 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 SLC8A1P32418 973 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 RGRP47804 291 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 CSNK1DP48730 415 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 LMAN1P49257 510 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 SCNN1BP51168 640 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 PMS2P54278 862 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 MAXP61244 160 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 AP1S1P61966 158 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 SFSWAPQ12872 951 aaKnown RBP11.97□□□□□ -0.49
DDX39A-219ENST00000592927 ZBTB17Q13105 803 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 GRM3Q14832 879 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 HIF1AQ16665 826 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 TTC31Q49AM3 519 aaPredicted RBP11.97□□□□□ -0.49
DDX39A-219ENST00000592927 ANKRD22Q5VYY1 191 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 CCDC25Q86WR0 208 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 KLHDC8BQ8IXV7 354 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 PDIK1LQ8N165 341 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 PGBD5Q8N414 524 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 PNPLA1Q8N8W4 532 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 TMIEQ8NEW7 156 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 PIP4K2CQ8TBX8 421 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 GANCQ8TET4 914 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 ADAMTS14Q8WXS8 1223 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 TTC25Q96NG3 672 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 AGAP3Q96P47 875 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 FCRL5Q96RD9 977 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 NUDCD1Q96RS6 583 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 RBM15Q96T37 977 aaKnown RBP eCLIP11.97□□□□□ -0.491e-8■■■■■ 32.1
DDX39A-219ENST00000592927 OSBPL1AQ9BXW6 950 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 CEP41Q9BYV8 373 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 PABPC3Q9H361 631 aaKnown RBP11.97□□□□□ -0.49
DDX39A-219ENST00000592927 XAB2Q9HCS7 855 aaKnown RBP11.97□□□□□ -0.49
DDX39A-219ENST00000592927 RSPH14Q9UHP6 348 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 SCML1Q9UN30 329 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 ATP8A1Q9Y2Q0 1164 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 AAR2Q9Y312 384 aaKnown RBP11.97□□□□□ -0.49
DDX39A-219ENST00000592927 WASF2Q9Y6W5 498 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 KALRNO60229 2985 aa11.97□□□□□ -0.49
DDX39A-219ENST00000592927 TTC24A2A3L6 582 aaPredicted RBP11.96□□□□□ -0.49
DDX39A-219ENST00000592927 KPNA3O00505 521 aaPredicted RBP11.96□□□□□ -0.49
DDX39A-219ENST00000592927 MID1O15344 667 aa11.96□□□□□ -0.49
DDX39A-219ENST00000592927 INSIG1O15503 277 aa11.96□□□□□ -0.49
DDX39A-219ENST00000592927 ZNF217O75362 1048 aa11.96□□□□□ -0.49
DDX39A-219ENST00000592927 TMEM63AO94886 807 aa11.96□□□□□ -0.49
DDX39A-219ENST00000592927 SUN1O94901 812 aa11.96□□□□□ -0.49
DDX39A-219ENST00000592927 CTSLP07711 333 aa11.96□□□□□ -0.49
DDX39A-219ENST00000592927 TSHRP16473 764 aa11.96□□□□□ -0.49
DDX39A-219ENST00000592927 C5AR1P21730 350 aa11.96□□□□□ -0.49
DDX39A-219ENST00000592927 BCKDHBP21953 392 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms