RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 NME4O00746 187 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 WISP3O95389 354 aaPredicted RBP14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 ALDOCP09972 364 aaKnown RBP14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 C7P10643 843 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 HSD17B1P14061 328 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 PLK1P53350 603 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 STX1BP61266 288 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 CTBSQ01459 385 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 TTC33Q6PID6 262 aaPredicted RBP14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 ZNF554Q86TJ5 538 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 CLVS1Q8IUQ0 354 aaPredicted RBP14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 EPHX4Q8IUS5 362 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 CALML6Q8TD86 181 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 PCED1BQ96HM7 432 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 ADI1Q9BV57 179 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 TRIM15Q9C019 465 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 FAIMQ9NVQ4 179 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 FAF1Q9UNN5 650 aaPredicted RBP14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 NDUFAF1Q9Y375 327 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 MYL3P08590 195 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 GNAO1P09471 354 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 PRAMEP78395 509 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 PLOD1Q02809 727 aaPredicted RBP14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 MERTKQ12866 999 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 SLC36A3Q495N2 470 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 PITRM1Q5JRX3 1037 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 TBCELQ5QJ74 424 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 LCN8Q6JVE9 175 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 GALNT7Q86SF2 657 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 TAC4Q86UU9 113 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 MINDY1Q8N5J2 469 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 C12orf43Q96C57 262 aaKnown RBP14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 FEM1CQ96JP0 617 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 NACA2Q9H009 215 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 HIPK3Q9H422 1215 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 FBRSL1Q9HCM7 1045 aaKnown RBP14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 C8orf4Q9NR00 106 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 EBF1Q9UH73 591 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 PTCH2Q9Y6C5 1203 aa14.9□□□□□ -0.02
SMARCA4-219ENST00000592604 DHRS12A0PJE2 317 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 MYBPHLA2RUH7 354 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 SAC3D1A6NKF1 404 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 PMPCBO75439 489 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 IL10P22301 178 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 IGFBP6P24592 240 aaPredicted RBP14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 SLC26A3P40879 764 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 ENTPD1P49961 510 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 SFSWAPQ12872 951 aaKnown RBP14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 BNIP2Q12982 314 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 INPP5AQ14642 412 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 ZNF678Q5SXM1 525 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 CLEC6AQ6EIG7 209 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 RWDD4Q6NW29 188 aaKnown RBP14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 ZNF786Q8N393 782 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 SMG8Q8ND04 991 aaKnown RBP14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 ANKRD49Q8WVL7 239 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 TMEM40Q8WWA1 233 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 C19orf60Q96EN9 201 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 C3orf30Q96M34 536 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 IPPQ9Y573 584 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 A0A0J9YYE9 177 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 MAGEB3O15480 346 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 SNAI1O95863 264 aaPredicted RBP14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 HLA-DQB2P05538 268 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 RPL10P27635 214 aaKnown RBP14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 HOXC13P31276 330 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 CHRNA4P43681 627 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 LHX1P48742 406 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 EML3Q32P44 896 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 DUSP28Q4G0W2 176 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 HECTD2Q5U5R9 776 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 ELMSAN1Q6PJG2 1045 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 FASTKD5Q7L8L6 764 aaKnown RBP14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 SLC15A3Q8IY34 581 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 COLGALT2Q8IYK4 626 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 CLYBLQ8N0X4 340 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 GABPB2Q8TAK5 448 aaPredicted RBP14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 SENP8Q96LD8 212 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 C9orf16Q9BUW7 83 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 FSD1LQ9BXM9 530 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 SLC39A8Q9C0K1 460 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 ARNT2Q9HBZ2 717 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 ATP6AP2A0A1C7CYW4 349 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 MBLAC1A4D2B0 266 aaPredicted RBP14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 PTGESO14684 152 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 ATP6AP2O75787 350 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 SMPD1P17405 629 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 FASP25445 335 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 TTKP33981 857 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 NFKB2Q00653 900 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 EIF4EBP2Q13542 120 aaPredicted RBP14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 SNX17Q15036 470 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 ATP6AP1Q15904 470 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 SPATS1Q496A3 300 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 UNC50Q53HI1 259 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 SPRED1Q7Z699 444 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 SPNS2Q8IVW8 549 aa14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 ZNF420Q8TAQ5 688 aaPredicted RBP14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 CENPNQ96H22 339 aaPredicted RBP14.89□□□□□ -0.03
SMARCA4-219ENST00000592604 LRCH3Q96II8 777 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms