RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 OTUB2Q96DC9 234 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 ASIC4Q96FT7 647 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 TTC1Q99614 292 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 EPHX3Q9H6B9 360 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 KLHL8Q9P2G9 620 aaPredicted RBP14.72□□□□□ -0.05
CCDC43-203ENST00000588210 SLC12A8A0AV02 714 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 ARHGAP42A6NI28 874 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 M0QYT0 321 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 MAP3K13O43283 966 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 CREB3O43889 395 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 STC2O76061 302 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 PTPN3P26045 913 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 RUNX3Q13761 415 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 SLC44A4Q53GD3 710 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 SYPL2Q5VXT5 272 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 NAIF1Q69YI7 327 aaPredicted RBP14.72□□□□□ -0.05
CCDC43-203ENST00000588210 CES3Q6UWW8 571 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 DHDDSQ86SQ9 333 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 TMEM135Q86UB9 458 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 SLC25A41Q8N5S1 370 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 ZNF483Q8TF39 744 aaPredicted RBP14.72□□□□□ -0.05
CCDC43-203ENST00000588210 NTAN1Q96AB6 310 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 PLD4Q96BZ4 506 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 TSC22D3Q99576 134 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 CDH19Q9H159 772 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 CASS4Q9NQ75 786 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 IL1RAPL1Q9NZN1 696 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 PDP2Q9P2J9 529 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 VANGL2Q9ULK5 521 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 WNT6Q9Y6F9 365 aa14.72□□□□□ -0.05
CCDC43-203ENST00000588210 BDP1A6H8Y1 2624 aa14.71□□□□□ -0.05
CCDC43-203ENST00000588210 ERI2A8K979 691 aaKnown RBP14.71□□□□□ -0.05
CCDC43-203ENST00000588210 GREM1O60565 184 aa14.71□□□□□ -0.05
CCDC43-203ENST00000588210 H2AFYO75367 372 aaKnown RBP14.71□□□□□ -0.05
CCDC43-203ENST00000588210 BAG2O95816 211 aa14.71□□□□□ -0.05
CCDC43-203ENST00000588210 GLULP15104 373 aa14.71□□□□□ -0.05
CCDC43-203ENST00000588210 ITGAXP20702 1163 aa14.71□□□□□ -0.05
CCDC43-203ENST00000588210 PRKCQQ04759 706 aa14.71□□□□□ -0.05
CCDC43-203ENST00000588210 SCAPQ12770 1279 aa14.71□□□□□ -0.05
CCDC43-203ENST00000588210 SEMA3BQ13214 749 aa14.71□□□□□ -0.05
CCDC43-203ENST00000588210 CCNIQ14094 377 aa14.71□□□□□ -0.05
CCDC43-203ENST00000588210 HNRNPDQ14103 355 aaKnown RBP14.71□□□□□ -0.05
CCDC43-203ENST00000588210 EML3Q32P44 896 aa14.71□□□□□ -0.05
CCDC43-203ENST00000588210 RALGPS1Q5JS13 557 aa14.71□□□□□ -0.05
CCDC43-203ENST00000588210 EPGNQ6UW88 154 aa14.71□□□□□ -0.05
CCDC43-203ENST00000588210 PID1Q7Z2X4 250 aa14.71□□□□□ -0.05
CCDC43-203ENST00000588210 STRA8Q7Z7C7 330 aa14.71□□□□□ -0.05
CCDC43-203ENST00000588210 ADGRG2Q8IZP9 1017 aa14.71□□□□□ -0.05
CCDC43-203ENST00000588210 DQX1Q8TE96 717 aaKnown RBP14.71□□□□□ -0.05
CCDC43-203ENST00000588210 SERPINB11Q96P15 392 aa14.71□□□□□ -0.05
CCDC43-203ENST00000588210 LINC00597Q9H2U6 94 aa14.71□□□□□ -0.05
CCDC43-203ENST00000588210 EBF3Q9H4W6 596 aa14.71□□□□□ -0.05
CCDC43-203ENST00000588210 PIGVQ9NUD9 493 aa14.71□□□□□ -0.05
CCDC43-203ENST00000588210 ZNF358Q9NW07 568 aa14.71□□□□□ -0.05
CCDC43-203ENST00000588210 GTSE1Q9NYZ3 720 aa14.71□□□□□ -0.05
CCDC43-203ENST00000588210 ZNF510Q9Y2H8 683 aa14.71□□□□□ -0.05
CCDC43-203ENST00000588210 MYLKQ15746 1914 aa14.71□□□□□ -0.05
CCDC43-203ENST00000588210 ZCWPW2A0A1B0GU75 182 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 NFATC1O95644 943 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 HMBSP08397 361 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 CSE1LP55060 971 aaKnown RBP14.7□□□□□ -0.06
CCDC43-203ENST00000588210 TNK2Q07912 1038 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 PPIDQ08752 370 aaKnown RBP14.7□□□□□ -0.06
CCDC43-203ENST00000588210 TRIP4Q15650 581 aaPredicted RBP14.7□□□□□ -0.06
CCDC43-203ENST00000588210 SMAD1Q15797 465 aaKnown RBP14.7□□□□□ -0.06
CCDC43-203ENST00000588210 ITPRIPL2Q3MIP1 535 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 FSCBQ5H9T9 825 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 VWA5B1Q5TIE3 1220 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 KCTD11Q693B1 232 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 RAPH1Q70E73 1250 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 PLD6Q8N2A8 252 aaKnown RBP14.7□□□□□ -0.06
CCDC43-203ENST00000588210 WBP2Q969T9 261 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 MSANTD3Q96H12 275 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 SHDQ96IW2 340 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 CCDC28BQ9BUN5 200 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 HPS4Q9NQG7 708 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 HEBP1Q9NRV9 189 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 SPATS2LQ9NUQ6 558 aaKnown RBP14.7□□□□□ -0.06
CCDC43-203ENST00000588210 RRN3Q9NYV6 651 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 BFARQ9NZS9 450 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 CA14Q9ULX7 337 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 SYNJ2BP-COX16A0A087WUM0 186 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 G3V2L1 256 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 KCNK1O00180 336 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 NCAM2O15394 837 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 TIMM44O43615 452 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 LYNP07948 512 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 GMPRP36959 345 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 NUMBP49757 651 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 RING1Q06587 406 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 MLF2Q15773 248 aaPredicted RBP14.7□□□□□ -0.06
CCDC43-203ENST00000588210 FSTL4Q6MZW2 842 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 Q6ZNB5 142 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 TP53INP2Q8IXH6 220 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 SIX5Q8N196 739 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 CPA6Q8N4T0 437 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 SREK1Q8WXA9 508 aaKnown RBP14.7□□□□□ -0.06
CCDC43-203ENST00000588210 MCMBPQ9BTE3 642 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 BRD8Q9H0E9 1235 aa14.7□□□□□ -0.06
CCDC43-203ENST00000588210 GBA3Q9H227 469 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms