RNA–Protein interactions for RNA: ENST00000587776.1

HDAC5-206, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 917 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-206ENST00000587776 TEX33O43247 280 aa15.21■□□□□ 0.03
HDAC5-206ENST00000587776 ITGB2P05107 769 aa15.21■□□□□ 0.03
HDAC5-206ENST00000587776 ANP32AP39687 249 aaKnown RBP15.21■□□□□ 0.03
HDAC5-206ENST00000587776 ETV5P41161 510 aa15.21■□□□□ 0.03
HDAC5-206ENST00000587776 RGRP47804 291 aa15.21■□□□□ 0.03
HDAC5-206ENST00000587776 PAPOLAP51003 745 aaKnown RBP15.21■□□□□ 0.03
HDAC5-206ENST00000587776 POLR2LP62875 67 aaKnown RBP15.21■□□□□ 0.03
HDAC5-206ENST00000587776 BIRC2Q13490 618 aa15.21■□□□□ 0.03
HDAC5-206ENST00000587776 ACOX1Q15067 660 aa15.21■□□□□ 0.03
HDAC5-206ENST00000587776 TSR1Q2NL82 804 aaKnown RBP15.21■□□□□ 0.03
HDAC5-206ENST00000587776 LINC00303Q3SY05 128 aa15.21■□□□□ 0.03
HDAC5-206ENST00000587776 TMEM164Q5U3C3 297 aa15.21■□□□□ 0.03
HDAC5-206ENST00000587776 XKR5Q6UX68 686 aa15.21■□□□□ 0.03
HDAC5-206ENST00000587776 LIPIQ6XZB0 460 aa15.21■□□□□ 0.03
HDAC5-206ENST00000587776 ZFAND4Q86XD8 727 aa15.21■□□□□ 0.03
HDAC5-206ENST00000587776 ANKRD20A12PQ8NF67 263 aa15.21■□□□□ 0.03
HDAC5-206ENST00000587776 DHX35Q9H5Z1 703 aaKnown RBP15.21■□□□□ 0.03
HDAC5-206ENST00000587776 PCDHGA4Q9Y5G9 962 aa15.21■□□□□ 0.03
HDAC5-206ENST00000587776 SDK2Q58EX2 2172 aa15.21■□□□□ 0.02
HDAC5-206ENST00000587776 PRSS38A1L453 326 aa15.2■□□□□ 0.02
HDAC5-206ENST00000587776 CFAP69A5D8W1 941 aa15.2■□□□□ 0.02
HDAC5-206ENST00000587776 RHPN2P1A8MT19 583 aa15.2■□□□□ 0.02
HDAC5-206ENST00000587776 PDE2AO00408 941 aaPredicted RBP15.2■□□□□ 0.02
HDAC5-206ENST00000587776 TNFRSF10CO14798 259 aa15.2■□□□□ 0.02
HDAC5-206ENST00000587776 ARHGAP6O43182 974 aa15.2■□□□□ 0.02
HDAC5-206ENST00000587776 NUDT21O43809 227 aaKnown RBP15.2■□□□□ 0.02
HDAC5-206ENST00000587776 FAM87AP0C7U9 286 aa15.2■□□□□ 0.02
HDAC5-206ENST00000587776 CSNK1DP48730 415 aa15.2■□□□□ 0.02
HDAC5-206ENST00000587776 ZFP36L1Q07352 338 aaKnown RBP15.2■□□□□ 0.02
HDAC5-206ENST00000587776 RALGDSQ12967 914 aa15.2■□□□□ 0.02
HDAC5-206ENST00000587776 HLTFQ14527 1009 aaKnown RBP eCLIP15.2■□□□□ 0.02
HDAC5-206ENST00000587776 AMZ1Q400G9 498 aa15.2■□□□□ 0.02
HDAC5-206ENST00000587776 CDKAL1Q5VV42 579 aa15.2■□□□□ 0.02
HDAC5-206ENST00000587776 OGFOD3Q6PK18 319 aa15.2■□□□□ 0.02
HDAC5-206ENST00000587776 CLEC17AQ6ZS10 378 aa15.2■□□□□ 0.02
HDAC5-206ENST00000587776 DPPA4Q7L190 304 aa15.2■□□□□ 0.02
HDAC5-206ENST00000587776 PIM3Q86V86 326 aa15.2■□□□□ 0.02
HDAC5-206ENST00000587776 SFTPA2Q8IWL1 248 aa15.2■□□□□ 0.02
HDAC5-206ENST00000587776 CCL4L1Q8NHW4 92 aa15.2■□□□□ 0.02
HDAC5-206ENST00000587776 ENOX1Q8TC92 643 aaKnown RBP15.2■□□□□ 0.02
HDAC5-206ENST00000587776 AGPAT1Q99943 283 aa15.2■□□□□ 0.02
HDAC5-206ENST00000587776 SLC39A8Q9C0K1 460 aa15.2■□□□□ 0.02
HDAC5-206ENST00000587776 CARS2Q9HA77 564 aaKnown RBP15.2■□□□□ 0.02
HDAC5-206ENST00000587776 RDH14Q9HBH5 336 aa15.2■□□□□ 0.02
HDAC5-206ENST00000587776 FOXJ2Q9P0K8 574 aa15.2■□□□□ 0.02
HDAC5-206ENST00000587776 SIK3Q9Y2K2 1263 aa15.2■□□□□ 0.02
HDAC5-206ENST00000587776 GOLGA6CA6NDK9 693 aa15.19■□□□□ 0.02
HDAC5-206ENST00000587776 GOLGA6BA6NDN3 693 aa15.19■□□□□ 0.02
HDAC5-206ENST00000587776 ZW10O43264 779 aa15.19■□□□□ 0.02
HDAC5-206ENST00000587776 GOLGA6DP0CG33 693 aa15.19■□□□□ 0.02
HDAC5-206ENST00000587776 SFTPCP11686 197 aa15.19■□□□□ 0.02
HDAC5-206ENST00000587776 CD82P27701 267 aa15.19■□□□□ 0.02
HDAC5-206ENST00000587776 ALDH4A1P30038 563 aa15.19■□□□□ 0.02
HDAC5-206ENST00000587776 CSRP3P50461 194 aa15.19■□□□□ 0.02
HDAC5-206ENST00000587776 SCNN1BP51168 640 aa15.19■□□□□ 0.02
HDAC5-206ENST00000587776 MAZP56270 477 aaKnown RBP15.19■□□□□ 0.02
HDAC5-206ENST00000587776 NFKB2Q00653 900 aa15.19■□□□□ 0.02
HDAC5-206ENST00000587776 ILF3Q12906 894 aaKnown RBP eCLIP15.19■□□□□ 0.02
HDAC5-206ENST00000587776 DENND2CQ68D51 928 aa15.19■□□□□ 0.02
HDAC5-206ENST00000587776 PNCKQ6P2M8 343 aa15.19■□□□□ 0.02
HDAC5-206ENST00000587776 SLITRK4Q8IW52 837 aa15.19■□□□□ 0.02
HDAC5-206ENST00000587776 ZDHHC1Q8WTX9 485 aa15.19■□□□□ 0.02
HDAC5-206ENST00000587776 NUS1Q96E22 293 aa15.19■□□□□ 0.02
HDAC5-206ENST00000587776 LGR4Q9BXB1 951 aa15.19■□□□□ 0.02
HDAC5-206ENST00000587776 ZMYND15Q9H091 742 aa15.19■□□□□ 0.02
HDAC5-206ENST00000587776 SEMA6CQ9H3T2 930 aa15.19■□□□□ 0.02
HDAC5-206ENST00000587776 PHPT1Q9NRX4 125 aaPredicted RBP15.19■□□□□ 0.02
HDAC5-206ENST00000587776 GOLGA6AQ9NYA3 693 aa15.19■□□□□ 0.02
HDAC5-206ENST00000587776 A0A1W2PQC6 194 aa15.18■□□□□ 0.02
HDAC5-206ENST00000587776 TCRBV5S1A1TA0A578 114 aa15.18■□□□□ 0.02
HDAC5-206ENST00000587776 C9orf172C9J069 976 aa15.18■□□□□ 0.02
HDAC5-206ENST00000587776 CPNE6O95741 557 aa15.18■□□□□ 0.02
HDAC5-206ENST00000587776 HOXC4P09017 264 aaPredicted RBP15.18■□□□□ 0.02
HDAC5-206ENST00000587776 MYCLP1P12525 358 aaPredicted RBP15.18■□□□□ 0.02
HDAC5-206ENST00000587776 CCNB1P14635 433 aa15.18■□□□□ 0.02
HDAC5-206ENST00000587776 PSMA2P25787 234 aa15.18■□□□□ 0.02
HDAC5-206ENST00000587776 TRIM23P36406 574 aa15.18■□□□□ 0.02
HDAC5-206ENST00000587776 RENBPP51606 427 aa15.18■□□□□ 0.02
HDAC5-206ENST00000587776 COPB1P53618 953 aaKnown RBP15.18■□□□□ 0.02
HDAC5-206ENST00000587776 RFTN1Q14699 578 aaPredicted RBP15.18■□□□□ 0.02
HDAC5-206ENST00000587776 PPP6R3Q5H9R7 873 aaPredicted RBP15.18■□□□□ 0.02
HDAC5-206ENST00000587776 PPP1R15BQ5SWA1 713 aa15.18■□□□□ 0.02
HDAC5-206ENST00000587776 ATG14Q6ZNE5 492 aa15.18■□□□□ 0.02
HDAC5-206ENST00000587776 TMPRSS9Q7Z410 1059 aa15.18■□□□□ 0.02
HDAC5-206ENST00000587776 MCOLN2Q8IZK6 566 aa15.18■□□□□ 0.02
HDAC5-206ENST00000587776 PDCD6IPQ8WUM4 868 aaKnown RBP15.18■□□□□ 0.02
HDAC5-206ENST00000587776 JPH3Q8WXH2 748 aaPredicted RBP15.18■□□□□ 0.02
HDAC5-206ENST00000587776 ECHDC3Q96DC8 303 aa15.18■□□□□ 0.02
HDAC5-206ENST00000587776 GSDMCQ9BYG8 508 aa15.18■□□□□ 0.02
HDAC5-206ENST00000587776 IL17BQ9UHF5 180 aa15.18■□□□□ 0.02
HDAC5-206ENST00000587776 PCSK1NQ9UHG2 260 aa15.18■□□□□ 0.02
HDAC5-206ENST00000587776 EIF3CLB5ME19 914 aaKnown RBP15.17■□□□□ 0.02
HDAC5-206ENST00000587776 STMND1H3BQB6 276 aa15.17■□□□□ 0.02
HDAC5-206ENST00000587776 PPFIA2O75334 1257 aa15.17■□□□□ 0.02
HDAC5-206ENST00000587776 RNF8O76064 485 aa15.17■□□□□ 0.02
HDAC5-206ENST00000587776 CCDC172P0C7W6 258 aa15.17■□□□□ 0.02
HDAC5-206ENST00000587776 NFKBIAP25963 317 aa15.17■□□□□ 0.02
HDAC5-206ENST00000587776 GNPDA1P46926 289 aa15.17■□□□□ 0.02
HDAC5-206ENST00000587776 PPM1FP49593 454 aaPredicted RBP15.17■□□□□ 0.02
HDAC5-206ENST00000587776 ATP1A2P50993 1020 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms