RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 CYP4F12Q9HCS2 524 aa18.64■□□□□ 0.57
DDX39A-206ENST00000587730 KANSL1LA0AUZ9 987 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 MATN4O95460 622 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 CLCNKBP51801 687 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 ATXN3P54252 364 aaPredicted RBP18.63■□□□□ 0.57
DDX39A-206ENST00000587730 NME5P56597 212 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 NUP107P57740 925 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 CYTH1Q15438 398 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 FAM110CQ1W6H9 321 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 RBM20Q5T481 1227 aaKnown RBP18.63■□□□□ 0.57
DDX39A-206ENST00000587730 EGFL6Q8IUX8 553 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 COLGALT2Q8IYK4 626 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 MIER2Q8N344 545 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 DNAJC5GQ8N7S2 189 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 FEM1CQ96JP0 617 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 SERPINB11Q96P15 392 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 GPATCH1Q9BRR8 931 aaKnown RBP18.63■□□□□ 0.57
DDX39A-206ENST00000587730 PFDN4Q9NQP4 134 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 TMEM45AQ9NWC5 275 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 ZNF638Q14966 1978 aaKnown RBP18.63■□□□□ 0.57
DDX39A-206ENST00000587730 TYW5A2RUC4 315 aaKnown RBP18.63■□□□□ 0.57
DDX39A-206ENST00000587730 NEMP2A6NFY4 417 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 MROH6A6NGR9 719 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 TRIM64CA6NLI5 447 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 GPIP06744 558 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 MRPL19P49406 292 aaKnown RBP18.63■□□□□ 0.57
DDX39A-206ENST00000587730 SLC7A2P52569 658 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 GRIK2Q13002 908 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 GK3PQ14409 553 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 MTX3Q5HYI7 312 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 ACBD5Q5T8D3 534 aaPredicted RBP18.63■□□□□ 0.57
DDX39A-206ENST00000587730 EFL1Q7Z2Z2 1120 aaKnown RBP18.63■□□□□ 0.57
DDX39A-206ENST00000587730 THEM5Q8N1Q8 247 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 UMODL1-AS1Q8N2C9 162 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 RHEBL1Q8TAI7 183 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 TFAP2CQ92754 450 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 PARK7Q99497 189 aaKnown RBP18.63■□□□□ 0.57
DDX39A-206ENST00000587730 C9orf16Q9BUW7 83 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 AP5M1Q9H0R1 490 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 CD320Q9NPF0 282 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 PCDHGB4Q9UN71 923 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 FIS1Q9Y3D6 152 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 PCDHGB5Q9Y5G0 923 aa18.63■□□□□ 0.57
DDX39A-206ENST00000587730 ANGPT2O15123 496 aa18.62■□□□□ 0.57
DDX39A-206ENST00000587730 SUPT7LO94864 414 aa18.62■□□□□ 0.57
DDX39A-206ENST00000587730 GPX3P22352 226 aa18.62■□□□□ 0.57
DDX39A-206ENST00000587730 KCNA5P22460 613 aa18.62■□□□□ 0.57
DDX39A-206ENST00000587730 BDNFP23560 247 aa18.62■□□□□ 0.57
DDX39A-206ENST00000587730 PSMA4P25789 261 aaKnown RBP18.62■□□□□ 0.57
DDX39A-206ENST00000587730 SLC5A2P31639 672 aa18.62■□□□□ 0.57
DDX39A-206ENST00000587730 BTG3Q14201 252 aaPredicted RBP18.62■□□□□ 0.57
DDX39A-206ENST00000587730 UPP1Q16831 310 aa18.62■□□□□ 0.57
DDX39A-206ENST00000587730 NHSL2Q5HYW2 709 aa18.62■□□□□ 0.57
DDX39A-206ENST00000587730 LCN8Q6JVE9 175 aa18.62■□□□□ 0.57
DDX39A-206ENST00000587730 RNF135Q8IUD6 432 aa18.62■□□□□ 0.57
DDX39A-206ENST00000587730 GAD1Q99259 594 aa18.62■□□□□ 0.57
DDX39A-206ENST00000587730 E9PAM4 449 aa18.61■□□□□ 0.57
DDX39A-206ENST00000587730 AKAP10O43572 662 aa18.61■□□□□ 0.57
DDX39A-206ENST00000587730 PRAMEP78395 509 aa18.61■□□□□ 0.57
DDX39A-206ENST00000587730 MRPS6P82932 125 aaKnown RBP18.61■□□□□ 0.57
DDX39A-206ENST00000587730 TSPY1Q01534 308 aa18.61■□□□□ 0.57
DDX39A-206ENST00000587730 RALGDSQ12967 914 aa18.61■□□□□ 0.57
DDX39A-206ENST00000587730 KIF19Q2TAC6 998 aa18.61■□□□□ 0.57
DDX39A-206ENST00000587730 DHRS4L2Q6PKH6 230 aa18.61■□□□□ 0.57
DDX39A-206ENST00000587730 LPCAT2Q7L5N7 544 aa18.61■□□□□ 0.57
DDX39A-206ENST00000587730 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.61■□□□□ 0.57
DDX39A-206ENST00000587730 GPR150Q8NGU9 434 aa18.61■□□□□ 0.57
DDX39A-206ENST00000587730 ADAMTS16Q8TE57 1224 aa18.61■□□□□ 0.57
DDX39A-206ENST00000587730 SEMA6AQ9H2E6 1030 aa18.61■□□□□ 0.57
DDX39A-206ENST00000587730 CAAP1Q9H8G2 361 aa18.61■□□□□ 0.57
DDX39A-206ENST00000587730 NOL11Q9H8H0 719 aaKnown RBP18.61■□□□□ 0.57
DDX39A-206ENST00000587730 OLAHQ9NV23 265 aa18.61■□□□□ 0.57
DDX39A-206ENST00000587730 ACTR3BQ9P1U1 418 aa18.61■□□□□ 0.57
DDX39A-206ENST00000587730 RIMKLBQ9ULI2 386 aa18.61■□□□□ 0.57
DDX39A-206ENST00000587730 TIMM13Q9Y5L4 95 aaPredicted RBP18.61■□□□□ 0.57
DDX39A-206ENST00000587730 TRPV2Q9Y5S1 764 aa18.61■□□□□ 0.57
DDX39A-206ENST00000587730 DHRS12A0PJE2 317 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 CSPG5O95196 566 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 SPATA31D3P0C874 917 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 IDO1P14902 403 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 RHOQP17081 205 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 MYF6P23409 242 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 FASP25445 335 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 CHRNA4P43681 627 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 PGGT1BP53609 377 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 MLLT6P55198 1093 aaPredicted RBP18.6■□□□□ 0.57
DDX39A-206ENST00000587730 HTRA3P83110 453 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 PPP1R3AQ16821 1122 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 TIGD5Q53EQ6 642 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 MARC1Q5VT66 337 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 MRNIPQ6NTE8 343 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 SPATA31D4Q6ZUB0 917 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 ISCA2Q86U28 154 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 MIPOL1Q8TD10 442 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 DIS3LQ8TF46 1054 aaKnown RBP18.6■□□□□ 0.57
DDX39A-206ENST00000587730 PHF21BQ96EK2 531 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 ZNF419Q96HQ0 510 aaPredicted RBP18.6■□□□□ 0.57
DDX39A-206ENST00000587730 UROC1Q96N76 676 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 PKMYT1Q99640 499 aa18.6■□□□□ 0.57
DDX39A-206ENST00000587730 CIB1Q99828 191 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms