RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 NPEPPSL1A6NEC2 478 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 NCAM2O15394 837 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 STATHP02808 62 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 CD72P21854 359 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 PGM1P36871 562 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 SEC13P55735 322 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 FAM189BP81408 668 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 ZC3HC1Q86WB0 502 aaKnown RBP10.31□□□□□ -0.76
RFFL-212ENST00000584655 ITFG1Q8TB96 612 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 SLC26A7Q8TE54 656 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 GFM2Q969S9 779 aaKnown RBP10.31□□□□□ -0.76
RFFL-212ENST00000584655 C8orf48Q96LL4 319 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 ASB8Q9H765 288 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 ADA2Q9NZK5 511 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 CD274Q9NZQ7 290 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 SENP1Q9P0U3 644 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 IGSF9Q9P2J2 1179 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 COPG2Q9UBF2 871 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 EMCNQ9ULC0 261 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 CD3EAPO15446 510 aaKnown RBP10.31□□□□□ -0.76
RFFL-212ENST00000584655 FGF10O15520 208 aaPredicted RBP10.31□□□□□ -0.76
RFFL-212ENST00000584655 PEX11AO75192 247 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 SERPINB8P50452 374 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 METAP1P53582 386 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 SERINC3Q13530 473 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 RBBP7Q16576 425 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 SLC5A9Q2M3M2 681 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 CNKSR3Q6P9H4 555 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 RINLQ6ZS11 566 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 CLNKQ7Z7G1 428 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 CLHC1Q8NHS4 586 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 FUBP3Q96I24 572 aaKnown RBP eCLIP10.31□□□□□ -0.76
RFFL-212ENST00000584655 SLC9A7Q96T83 725 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 TSEN34Q9BSV6 310 aaKnown RBP10.31□□□□□ -0.76
RFFL-212ENST00000584655 FRMD8P1Q9BZ68 369 aaPredicted RBP10.31□□□□□ -0.76
RFFL-212ENST00000584655 COG4Q9H9E3 785 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 MOCS1Q9NZB8 636 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 CRLS1Q9UJA2 301 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 SPTBP11277 2137 aa10.31□□□□□ -0.76
RFFL-212ENST00000584655 LINC00032P0C843 101 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 RECQLP46063 649 aaPredicted RBP10.3□□□□□ -0.76
RFFL-212ENST00000584655 NUDT2P50583 147 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 TRAF2Q12933 501 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 KPNB1Q14974 876 aaKnown RBP10.3□□□□□ -0.76
RFFL-212ENST00000584655 SPANXN3Q5MJ09 141 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 SPDYAQ5MJ70 313 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 TMCO4Q5TGY1 634 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 EMC10Q5UCC4 262 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 TIGD7Q6NT04 549 aaPredicted RBP10.3□□□□□ -0.76
RFFL-212ENST00000584655 PYDC1Q8WXC3 89 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 RSRC1Q96IZ7 334 aaKnown RBP10.3□□□□□ -0.76
RFFL-212ENST00000584655 ACAT2Q9BWD1 397 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 TRBV23OR9-2A0A075B6M9 112 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 GLRA3O75311 464 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 MT-ND1P03886 318 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 RARS2Q5T160 578 aaKnown RBP10.3□□□□□ -0.76
RFFL-212ENST00000584655 HECTD2Q5U5R9 776 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 DENND5AQ6IQ26 1287 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 PIWIL4Q7Z3Z4 852 aaKnown RBP10.3□□□□□ -0.76
RFFL-212ENST00000584655 ARHGAP18Q8N392 663 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 RIBC1Q8N443 379 aaPredicted RBP10.3□□□□□ -0.76
RFFL-212ENST00000584655 PTGR2Q8N8N7 351 aaPredicted RBP10.3□□□□□ -0.76
RFFL-212ENST00000584655 ANKLE1Q8NAG6 615 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 SLC30A3Q99726 388 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 CPNE1Q99829 537 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 UBE2OQ9C0C9 1292 aaKnown RBP10.3□□□□□ -0.76
RFFL-212ENST00000584655 OSBPL2Q9H1P3 480 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 MTRRQ9UBK8 725 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 SEPT3Q9UH03 358 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 ZDHHC2Q9UIJ5 367 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 CFAP20Q9Y6A4 193 aaKnown RBP10.3□□□□□ -0.76
RFFL-212ENST00000584655 RIF1Q5UIP0 2472 aaKnown RBP10.3□□□□□ -0.76
RFFL-212ENST00000584655 ENO4A6NNW6 628 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 PITPNM1O00562 1244 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 LATO43561 262 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 NQO1P15559 274 aaKnown RBP10.3□□□□□ -0.76
RFFL-212ENST00000584655 ARNTP27540 789 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 SOX9P48436 509 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 NRG1Q02297 640 aaPredicted RBP10.3□□□□□ -0.76
RFFL-212ENST00000584655 PCLAFQ15004 111 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 COL13A1Q5TAT6 717 aaPredicted RBP10.3□□□□□ -0.76
RFFL-212ENST00000584655 C1orf146Q5VVC0 180 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 CYP2R1Q6VVX0 501 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 FRA10AC1Q70Z53 315 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 LINC00523Q86TU6 105 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 MIER2Q8N344 545 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 AGAP11Q8TF27 550 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 IRGQQ8WZA9 623 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 TMEM109Q9BVC6 243 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 SLC25A51Q9H1U9 297 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 CASS4Q9NQ75 786 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 RRN3Q9NYV6 651 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 AHCTF1Q8WYP5 2266 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 CNOT1A5YKK6 2376 aaKnown RBP10.3□□□□□ -0.76
RFFL-212ENST00000584655 CACNA1GO43497 2377 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 MTSS1O43312 755 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 PRKCHP24723 683 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 MAT2AP31153 395 aaKnown RBP10.3□□□□□ -0.76
RFFL-212ENST00000584655 LIMK2P53671 638 aa10.3□□□□□ -0.76
RFFL-212ENST00000584655 HNRNPDQ14103 355 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms