RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 ZNF771Q7L3S4 317 aaPredicted RBP4.23□□□□□ -1.73
SMCHD1-208ENST00000583344 RAB11FIP2Q7L804 512 aa4.23□□□□□ -1.73
SMCHD1-208ENST00000583344 GALNT7Q86SF2 657 aa4.23□□□□□ -1.73
SMCHD1-208ENST00000583344 MYLK4Q86YV6 388 aaPredicted RBP4.23□□□□□ -1.73
SMCHD1-208ENST00000583344 SLC44A2Q8IWA5 706 aaPredicted RBP4.23□□□□□ -1.73
SMCHD1-208ENST00000583344 BRSK2Q8IWQ3 736 aa4.23□□□□□ -1.73
SMCHD1-208ENST00000583344 TMTC2Q8N394 836 aa4.23□□□□□ -1.73
SMCHD1-208ENST00000583344 KIAA1524Q8TCG1 905 aa4.23□□□□□ -1.73
SMCHD1-208ENST00000583344 WBP1Q96G27 269 aa4.23□□□□□ -1.73
SMCHD1-208ENST00000583344 HES6Q96HZ4 224 aa4.23□□□□□ -1.73
SMCHD1-208ENST00000583344 CLK4Q9HAZ1 481 aaKnown RBP4.23□□□□□ -1.73
SMCHD1-208ENST00000583344 C19orf53Q9UNZ5 99 aaPredicted RBP4.23□□□□□ -1.73
SMCHD1-208ENST00000583344 ATP6V1DQ9Y5K8 247 aa4.23□□□□□ -1.73
SMCHD1-208ENST00000583344 LTBP4Q8N2S1 1624 aa4.23□□□□□ -1.73
SMCHD1-208ENST00000583344 RPAP1Q9BWH6 1393 aaPredicted RBP4.23□□□□□ -1.73
SMCHD1-208ENST00000583344 SETD1AO15047 1707 aaKnown RBP4.23□□□□□ -1.73
SMCHD1-208ENST00000583344 RICTORQ6R327 1708 aa4.23□□□□□ -1.73
SMCHD1-208ENST00000583344 MON2Q7Z3U7 1717 aa4.23□□□□□ -1.73
SMCHD1-208ENST00000583344 TUBGCP6Q96RT7 1819 aa4.23□□□□□ -1.73
SMCHD1-208ENST00000583344 MYO5BQ9ULV0 1848 aa4.23□□□□□ -1.73
SMCHD1-208ENST00000583344 NRKQ7Z2Y5 1582 aa4.23□□□□□ -1.73
SMCHD1-208ENST00000583344 C3P01024 1663 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 USP42Q9H9J4 1324 aaKnown RBP4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 KIF26BQ2KJY2 2108 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 AKAP12Q02952 1782 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 CPS1P31327 1500 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 AGLP35573 1532 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 RGPD1P0DJD0 1748 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 SAA2-SAA4A0A096LPE2 208 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 PIP5K1CO60331 668 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 ADCY5O95622 1261 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 CGAP01215 116 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 ITGA2BP08514 1039 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 CYP4B1P13584 511 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 SERPINA4P29622 427 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 HSPA1LP34931 641 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 SETQ01105 290 aaPredicted RBP4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 PDCLQ13371 301 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 DGAT2L7PQ6IED9 249 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 LIN54Q6MZP7 749 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 KRBA2Q6ZNG9 492 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 G2E3Q7L622 706 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 POF1BQ8WVV4 589 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 CPT1BQ92523 772 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 ATOH1Q92858 354 aaPredicted RBP4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 TRIM63Q969Q1 353 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 C3orf49Q96BT1 292 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 IL17FQ96PD4 163 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 TEFMQ96QE5 360 aaKnown RBP4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 USP44Q9H0E7 712 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 PRDM8Q9NQV8 689 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 DIAPH3Q9NSV4 1193 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 KDRP35968 1356 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 AK9Q5TCS8 1911 aa4.22□□□□□ -1.73
SMCHD1-208ENST00000583344 CCDC171Q6TFL3 1326 aa4.21□□□□□ -1.73
SMCHD1-208ENST00000583344 IGLV5-37A0A075B6J1 123 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 ABHD14A-ACY1A0A1B0GW23 586 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 TIMM23O14925 209 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 FFAR2O15552 330 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 HNRNPRO43390 633 aaKnown RBP4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 STX6O43752 255 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 CCNT1O60563 726 aaKnown RBP4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 PTMAP06454 111 aaKnown RBP4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 ACP5P13686 325 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 SYT1P21579 422 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 DDR1Q08345 913 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 DMTNQ08495 405 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 ACSM2AQ08AH3 577 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 TRIM14Q14142 442 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 KRT72Q14CN4 511 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 RRS1Q15050 365 aaKnown RBP4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 MTHFSDQ2M296 383 aaKnown RBP4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 KRT24Q2M2I5 525 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 DSTYKQ6XUX3 929 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 RBM43Q6ZSC3 357 aaKnown RBP4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 MCM10Q7L590 875 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 RASGRP2Q7LDG7 609 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 RBFAQ8N0V3 343 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 ZNF114Q8NC26 417 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 ANKRD7Q92527 254 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 EID2BQ96D98 161 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 PAGR1Q9BTK6 254 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 MSTO1Q9BUK6 570 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 LSG1Q9H089 658 aaKnown RBP4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 PABPC3Q9H361 631 aaKnown RBP4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 CXorf56Q9H5V9 222 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 KCND3Q9UK17 655 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 BAG5Q9UL15 447 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 KIF3AQ9Y496 699 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 SCINQ9Y6U3 715 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 MSH6P52701 1360 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 PXDNLA1KZ92 1463 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 OVOS2A0A0J9YW53 1432 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 OVOS2Q6IE36 1432 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 ELP1O95163 1332 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 TTC41PQ6P2S7 1318 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 TTC21AQ8NDW8 1320 aa4.21□□□□□ -1.74
SMCHD1-208ENST00000583344 CACNA1FO60840 1977 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 METP08581 1390 aa4.2□□□□□ -1.74
SMCHD1-208ENST00000583344 MAP3K5Q99683 1374 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms