RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 BRAPQ7Z569 592 aa14.08□□□□□ -0.16
CSNK1D-213ENST00000580446 RHOT1Q8IXI2 618 aa14.08□□□□□ -0.16
CSNK1D-213ENST00000580446 FBXL13Q8NEE6 735 aa14.08□□□□□ -0.16
CSNK1D-213ENST00000580446 INPP5DQ92835 1189 aa14.08□□□□□ -0.16
CSNK1D-213ENST00000580446 HSFY1Q96LI6 401 aa14.08□□□□□ -0.16
CSNK1D-213ENST00000580446 POPDC2Q9HBU9 364 aa14.08□□□□□ -0.16
CSNK1D-213ENST00000580446 NDFIP2Q9NV92 336 aa14.08□□□□□ -0.16
CSNK1D-213ENST00000580446 SIDT1Q9NXL6 827 aaKnown RBP14.08□□□□□ -0.16
CSNK1D-213ENST00000580446 PDP2Q9P2J9 529 aa14.08□□□□□ -0.16
CSNK1D-213ENST00000580446 COPG1Q9Y678 874 aaKnown RBP14.08□□□□□ -0.16
CSNK1D-213ENST00000580446 POLEQ07864 2286 aa14.08□□□□□ -0.16
CSNK1D-213ENST00000580446 CHD5Q8TDI0 1954 aa14.07□□□□□ -0.16
CSNK1D-213ENST00000580446 PKDREJQ9NTG1 2253 aa14.07□□□□□ -0.16
CSNK1D-213ENST00000580446 E5RJQ4 531 aa14.07□□□□□ -0.16
CSNK1D-213ENST00000580446 ZW10O43264 779 aa14.07□□□□□ -0.16
CSNK1D-213ENST00000580446 F9P00740 461 aa14.07□□□□□ -0.16
CSNK1D-213ENST00000580446 VARSP26640 1264 aaKnown RBP14.07□□□□□ -0.16
CSNK1D-213ENST00000580446 OR1E1P30953 314 aa14.07□□□□□ -0.16
CSNK1D-213ENST00000580446 KIAA1024LP59773 190 aa14.07□□□□□ -0.16
CSNK1D-213ENST00000580446 YWHAZP63104 245 aaKnown RBP14.07□□□□□ -0.16
CSNK1D-213ENST00000580446 MTM1Q13496 603 aa14.07□□□□□ -0.16
CSNK1D-213ENST00000580446 MYLK3Q32MK0 819 aa14.07□□□□□ -0.16
CSNK1D-213ENST00000580446 TMEM52BQ4KMG9 183 aa14.07□□□□□ -0.16
CSNK1D-213ENST00000580446 DENND1BQ6P3S1 775 aa14.07□□□□□ -0.16
CSNK1D-213ENST00000580446 RASGRP3Q8IV61 690 aa14.07□□□□□ -0.16
CSNK1D-213ENST00000580446 DRC7Q8IY82 874 aa14.07□□□□□ -0.16
CSNK1D-213ENST00000580446 ZNF683Q8IZ20 524 aa14.07□□□□□ -0.16
CSNK1D-213ENST00000580446 DEFB106AQ8N104 65 aa14.07□□□□□ -0.16
CSNK1D-213ENST00000580446 UBR7Q8N806 425 aa14.07□□□□□ -0.16
CSNK1D-213ENST00000580446 UBE2Q2Q8WVN8 375 aa14.07□□□□□ -0.16
CSNK1D-213ENST00000580446 KAT5Q92993 513 aa14.07□□□□□ -0.16
CSNK1D-213ENST00000580446 SERTAD1Q9UHV2 236 aa14.07□□□□□ -0.16
CSNK1D-213ENST00000580446 INSIG1O15503 277 aa14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 NDUFA10O95299 355 aa14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 TIAF1O95411 115 aa14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 PIGNO95427 931 aa14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 CD99P14209 185 aa14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 XPAP23025 273 aaPredicted RBP14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 NR2F2P24468 414 aa14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 SEPHS1P49903 392 aa14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 CDK17Q00537 523 aa14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 AMPD3Q01432 767 aa14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 ILF3Q12906 894 aaKnown RBP eCLIP14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 NFATC2Q13469 925 aa14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 SQSTM1Q13501 440 aa14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 UGT8Q16880 541 aa14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 SMTNL2Q2TAL5 461 aa14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 CNNM4Q6P4Q7 775 aa14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 INTS8Q75QN2 995 aaKnown RBP14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 NXPE1Q8N323 547 aa14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 OR10G6Q8NH81 332 aa14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 OR6C1Q96RD1 312 aa14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 SLC38A3Q99624 504 aa14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 GSDMCQ9BYG8 508 aa14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 PCDH12Q9NPG4 1184 aa14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 PCDHB4Q9Y5E5 795 aa14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 PCDHGA6Q9Y5G7 932 aa14.06□□□□□ -0.16
CSNK1D-213ENST00000580446 ACANP16112 2415 aa14.05□□□□□ -0.16
CSNK1D-213ENST00000580446 PDXKO00764 312 aa14.05□□□□□ -0.16
CSNK1D-213ENST00000580446 EML2O95834 649 aa14.05□□□□□ -0.16
CSNK1D-213ENST00000580446 SLC2A3P11169 496 aa14.05□□□□□ -0.16
CSNK1D-213ENST00000580446 TFE3P19532 575 aaPredicted RBP14.05□□□□□ -0.16
CSNK1D-213ENST00000580446 HTR1EP28566 365 aa14.05□□□□□ -0.16
CSNK1D-213ENST00000580446 GLRBP48167 497 aa14.05□□□□□ -0.16
CSNK1D-213ENST00000580446 POLD2P49005 469 aa14.05□□□□□ -0.16
CSNK1D-213ENST00000580446 CTBSQ01459 385 aa14.05□□□□□ -0.16
CSNK1D-213ENST00000580446 CNGA2Q16280 664 aa14.05□□□□□ -0.16
CSNK1D-213ENST00000580446 C5orf22Q49AR2 442 aa14.05□□□□□ -0.16
CSNK1D-213ENST00000580446 CBWD6Q4V339 395 aa14.05□□□□□ -0.16
CSNK1D-213ENST00000580446 CBWD3Q5JTY5 395 aa14.05□□□□□ -0.16
CSNK1D-213ENST00000580446 CBWD5Q5RIA9 395 aa14.05□□□□□ -0.16
CSNK1D-213ENST00000580446 SETD3Q86TU7 594 aaPredicted RBP14.05□□□□□ -0.16
CSNK1D-213ENST00000580446 OR2AP1Q8NGE2 309 aa14.05□□□□□ -0.16
CSNK1D-213ENST00000580446 HMCESQ96FZ2 354 aa14.05□□□□□ -0.16
CSNK1D-213ENST00000580446 ILKAPQ9H0C8 392 aaPredicted RBP14.05□□□□□ -0.16
CSNK1D-213ENST00000580446 MAP1AP78559 2803 aaPredicted RBP14.05□□□□□ -0.16
CSNK1D-213ENST00000580446 ANKRD36A6QL64 1941 aa14.04□□□□□ -0.16
CSNK1D-213ENST00000580446 E2F3O00716 465 aa14.04□□□□□ -0.16
CSNK1D-213ENST00000580446 SART1O43290 800 aaKnown RBP14.04□□□□□ -0.16
CSNK1D-213ENST00000580446 BUB1BO60566 1050 aaPredicted RBP14.04□□□□□ -0.16
CSNK1D-213ENST00000580446 SRGAP2O75044 1071 aa14.04□□□□□ -0.16
CSNK1D-213ENST00000580446 CEACAM4O75871 244 aa14.04□□□□□ -0.16
CSNK1D-213ENST00000580446 BPIP17213 487 aa14.04□□□□□ -0.16
CSNK1D-213ENST00000580446 GFERP55789 205 aa14.04□□□□□ -0.16
CSNK1D-213ENST00000580446 HDAC4P56524 1084 aa14.04□□□□□ -0.16
CSNK1D-213ENST00000580446 GPLD1P80108 840 aa14.04□□□□□ -0.16
CSNK1D-213ENST00000580446 KYNUQ16719 465 aa14.04□□□□□ -0.16
CSNK1D-213ENST00000580446 ANO6Q4KMQ2 910 aa14.04□□□□□ -0.16
CSNK1D-213ENST00000580446 ARTNQ5T4W7 220 aa14.04□□□□□ -0.16
CSNK1D-213ENST00000580446 OTUD1Q5VV17 481 aaPredicted RBP14.04□□□□□ -0.16
CSNK1D-213ENST00000580446 HGSNATQ68CP4 663 aa14.04□□□□□ -0.16
CSNK1D-213ENST00000580446 ST6GALNAC3Q8NDV1 305 aa14.04□□□□□ -0.16
CSNK1D-213ENST00000580446 SLC37A2Q8TED4 501 aa14.04□□□□□ -0.16
CSNK1D-213ENST00000580446 USP28Q96RU2 1077 aa14.04□□□□□ -0.16
CSNK1D-213ENST00000580446 DPYSL5Q9BPU6 564 aa14.04□□□□□ -0.16
CSNK1D-213ENST00000580446 LHX9Q9NQ69 397 aa14.04□□□□□ -0.16
CSNK1D-213ENST00000580446 AJAP1Q9UKB5 411 aaPredicted RBP14.04□□□□□ -0.16
CSNK1D-213ENST00000580446 SUFUQ9UMX1 484 aa14.04□□□□□ -0.16
CSNK1D-213ENST00000580446 MAPK8IP1Q9UQF2 711 aa14.04□□□□□ -0.16
CSNK1D-213ENST00000580446 NEU2Q9Y3R4 380 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms