RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 TMCC1O94876 653 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 ZRANB2O95218 330 aaKnown RBP eCLIP3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 IPO7O95373 1038 aaKnown RBP3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 GSRP00390 522 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 APOC2P02655 101 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 HLA-DQB2P05538 268 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 SP9P0CG40 484 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 HOXB2P14652 356 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 GM2AP17900 193 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 POLR2EP19388 210 aaKnown RBP3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 TGM2P21980 687 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 ARL4AP40617 200 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 WASP42768 502 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 CSNK1DP48730 415 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 RWDD2BP57060 319 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 TAS2R38P59533 333 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 RPS14P62263 151 aaKnown RBP3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 ECT2LQ008S8 904 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 SULT2A1Q06520 285 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 ZNF33AQ06730 810 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 NIPAL4Q0D2K0 466 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 KRT81Q14533 505 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 POLD3Q15054 466 aaPredicted RBP3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 LLGL1Q15334 1064 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 DLG2Q15700 870 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 CYP1B1Q16678 543 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 ZNF528Q3MIS6 628 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 HS1BP3Q53T59 392 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 TMEM31Q5JXX7 168 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 RWDD4Q6NW29 188 aaKnown RBP3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 TMCO3Q6UWJ1 677 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 LEKR1Q6ZMV7 388 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 DPY19L3Q6ZPD9 716 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 B4GALNT4Q76KP1 1039 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 PEX26Q7Z412 305 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 SLC13A5Q86YT5 568 aaPredicted RBP3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 C1orf210Q8IVY1 113 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 RCOR2Q8IZ40 523 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 SYCE1Q8N0S2 351 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 AADATQ8N5Z0 425 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 LZTR1Q8N653 840 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 FRMD1Q8N878 549 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 PRELID2Q8N945 189 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 GLIS1Q8NBF1 620 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 CHST14Q8NCH0 376 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 TRIM58Q8NG06 486 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 ARRDC2Q8TBH0 407 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 ACTL9Q8TC94 416 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 COG1Q8WTW3 980 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 UBE2Q2Q8WVN8 375 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 NKD2Q969F2 451 aaPredicted RBP3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 FUBP1Q96AE4 644 aaKnown RBP3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 ISG20Q96AZ6 181 aaKnown RBP3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 ARRDC3Q96B67 414 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 ECHDC3Q96DC8 303 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 RTP4Q96DX8 246 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 RBM41Q96IZ5 413 aaKnown RBP3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 ZNF599Q96NL3 588 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 QKIQ96PU8 341 aaKnown RBP eCLIP3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 LGMNQ99538 433 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 MGME1Q9BQP7 344 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 BDH2Q9BUT1 245 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 C1QTNF1Q9BXJ1 281 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 CALN1Q9BXU9 219 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 CIPCQ9C0C6 399 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 CEP44Q9C0F1 390 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 PRDM16Q9HAZ2 1276 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 ATP13A1Q9HD20 1204 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 TRMT1Q9NXH9 659 aaKnown RBP3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 SMARCAL1Q9NZC9 954 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 IPO11Q9UI26 975 aaKnown RBP3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 MBD1Q9UIS9 605 aaPredicted RBP3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 VPS28Q9UK41 221 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 FBXO4Q9UKT5 387 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 AMFRQ9UKV5 643 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 CNOT11Q9UKZ1 510 aaKnown RBP3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 PPM1HQ9ULR3 514 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 TTC7AQ9ULT0 858 aaPredicted RBP3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 SNX12Q9UMY4 172 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 ATP8A1Q9Y2Q0 1164 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 NEU2Q9Y3R4 380 aa3.84□□□□□ -1.79
SMARCE1-215ENST00000578995 CEP250Q9BV73 2442 aa3.84□□□□□ -1.8
SMARCE1-215ENST00000578995 RIF1Q5UIP0 2472 aaKnown RBP3.84□□□□□ -1.8
SMARCE1-215ENST00000578995 EP300Q09472 2414 aaPredicted RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 DCHS1Q96JQ0 3298 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 A0A096LPE4 126 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 IGHV1OR15-9A0A0B4J2B8 117 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 EDDM13A0A1B0GTR0 161 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 MYOCOSA0A1B0GUC4 107 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 A0A1W2PPZ6 126 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 BCLAF3A2AJT9 711 aaKnown RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 TARSL2A2RTX5 802 aaKnown RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 TYW5A2RUC4 315 aaKnown RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 ZSCAN5CA6NGD5 496 aaPredicted RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 ARHGAP42A6NI28 874 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 METTL12A8MUP2 240 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 KCNK1O00180 336 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 CBX4O00257 560 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 CES2O00748 559 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 APOL1O14791 398 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms