RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 GET4Q7L5D6 327 aaPredicted RBP20.33■□□□□ 0.85
SMG8-203ENST00000578922 PNPLA1Q8N8W4 532 aa20.33■□□□□ 0.85
SMG8-203ENST00000578922 MYLIPQ8WY64 445 aa20.33■□□□□ 0.85
SMG8-203ENST00000578922 ACDQ96AP0 544 aa20.33■□□□□ 0.85
SMG8-203ENST00000578922 C7orf26Q96N11 449 aa20.33■□□□□ 0.85
SMG8-203ENST00000578922 MIPEPQ99797 713 aa20.33■□□□□ 0.85
SMG8-203ENST00000578922 ARL8BQ9NVJ2 186 aa20.33■□□□□ 0.85
SMG8-203ENST00000578922 KCNK4Q9NYG8 393 aa20.33■□□□□ 0.85
SMG8-203ENST00000578922 TBC1D14Q9P2M4 693 aa20.33■□□□□ 0.85
SMG8-203ENST00000578922 PLLPQ9Y342 182 aa20.33■□□□□ 0.85
SMG8-203ENST00000578922 NUMBLQ9Y6R0 609 aa20.33■□□□□ 0.85
SMG8-203ENST00000578922 SOBPA7XYQ1 873 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 TPP1O14773 563 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 GLP2RO95838 553 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 TOP3BO95985 862 aaKnown RBP20.32■□□□□ 0.84
SMG8-203ENST00000578922 PRLP01236 227 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 ATP5BP06576 529 aaKnown RBP20.32■□□□□ 0.84
SMG8-203ENST00000578922 BMP1P13497 986 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 GKP32189 559 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 BLMHQ13867 455 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 GRTP1Q5TC63 336 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 NCEH1Q6PIU2 408 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 CDHR3Q6ZTQ4 885 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 NPAS3Q8IXF0 933 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 LMLNQ96KR4 655 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 RBBP8Q99708 897 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.32■□□□□ 0.84
SMG8-203ENST00000578922 GYG2O15488 501 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 GSC2O15499 205 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 BNIP3LO60238 219 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 EPOP01588 193 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 ALDOAP04075 364 aaKnown RBP20.32■□□□□ 0.84
SMG8-203ENST00000578922 PAMP19021 973 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 SP100P23497 879 aaPredicted RBP20.32■□□□□ 0.84
SMG8-203ENST00000578922 FSHRP23945 695 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 SERPINB3P29508 390 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 GMPRP36959 345 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 MPP1Q00013 466 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 THOC5Q13769 683 aaKnown RBP20.32■□□□□ 0.84
SMG8-203ENST00000578922 FAM78AQ5JUQ0 283 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 NDUFAF2Q8N183 169 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 CELF5Q8N6W0 485 aaKnown RBP20.32■□□□□ 0.84
SMG8-203ENST00000578922 OR13J1Q8NGT2 312 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 TIFAQ96CG3 184 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 MRPL38Q96DV4 380 aaKnown RBP20.32■□□□□ 0.84
SMG8-203ENST00000578922 RANBP9Q96S59 729 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 STOML1Q9UBI4 398 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 EVLQ9UI08 416 aaPredicted RBP20.32■□□□□ 0.84
SMG8-203ENST00000578922 SPO11Q9Y5K1 396 aa20.32■□□□□ 0.84
SMG8-203ENST00000578922 AURKAO14965 403 aa20.31■□□□□ 0.84
SMG8-203ENST00000578922 LDB2O43679 373 aa20.31■□□□□ 0.84
SMG8-203ENST00000578922 CNTFP26441 200 aa20.31■□□□□ 0.84
SMG8-203ENST00000578922 ARSDP51689 593 aa20.31■□□□□ 0.84
SMG8-203ENST00000578922 TCEAL5Q5H9L2 206 aa20.31■□□□□ 0.84
SMG8-203ENST00000578922 CMC1Q7Z7K0 106 aa20.31■□□□□ 0.84
SMG8-203ENST00000578922 ARHGAP24Q8N264 748 aa20.31■□□□□ 0.84
SMG8-203ENST00000578922 RYBPQ8N488 228 aaPredicted RBP20.31■□□□□ 0.84
SMG8-203ENST00000578922 KCNV2Q8TDN2 545 aa20.31■□□□□ 0.84
SMG8-203ENST00000578922 FGF13Q92913 245 aa20.31■□□□□ 0.84
SMG8-203ENST00000578922 ZFYVE19Q96K21 471 aa20.31■□□□□ 0.84
SMG8-203ENST00000578922 CAB39LQ9H9S4 337 aa20.31■□□□□ 0.84
SMG8-203ENST00000578922 A0A0U1RQS6 177 aa20.31■□□□□ 0.84
SMG8-203ENST00000578922 MROH6A6NGR9 719 aa20.31■□□□□ 0.84
SMG8-203ENST00000578922 ATP6V1C1P21283 382 aa20.31■□□□□ 0.84
SMG8-203ENST00000578922 CES1P23141 567 aa20.31■□□□□ 0.84
SMG8-203ENST00000578922 NSUN2Q08J23 767 aaKnown RBP eCLIP20.31■□□□□ 0.84
SMG8-203ENST00000578922 TSNAXIP1Q2TAA8 658 aa20.31■□□□□ 0.84
SMG8-203ENST00000578922 ZNF470Q6ECI4 717 aa20.31■□□□□ 0.84
SMG8-203ENST00000578922 KIAA0930Q6ICG6 404 aaPredicted RBP20.31■□□□□ 0.84
SMG8-203ENST00000578922 FSTL4Q6MZW2 842 aa20.31■□□□□ 0.84
SMG8-203ENST00000578922 DCLK2Q8N568 766 aa20.31■□□□□ 0.84
SMG8-203ENST00000578922 ACVR1CQ8NER5 493 aa20.31■□□□□ 0.84
SMG8-203ENST00000578922 OR6P1Q8NGX9 317 aa20.31■□□□□ 0.84
SMG8-203ENST00000578922 DUS2Q9NX74 493 aaKnown RBP20.31■□□□□ 0.84
SMG8-203ENST00000578922 ZMYM5Q9UJ78 669 aa20.31■□□□□ 0.84
SMG8-203ENST00000578922 ANKRD36A6QL64 1941 aa20.3■□□□□ 0.84
SMG8-203ENST00000578922 OR51F1A6NGY5 319 aa20.3■□□□□ 0.84
SMG8-203ENST00000578922 ENTPD5O75356 428 aa20.3■□□□□ 0.84
SMG8-203ENST00000578922 MYL2P10916 166 aa20.3■□□□□ 0.84
SMG8-203ENST00000578922 ESRRAP11474 423 aaPredicted RBP20.3■□□□□ 0.84
SMG8-203ENST00000578922 SAT1P21673 171 aa20.3■□□□□ 0.84
SMG8-203ENST00000578922 SPRP35270 261 aaPredicted RBP20.3■□□□□ 0.84
SMG8-203ENST00000578922 SLC1A2P43004 574 aa20.3■□□□□ 0.84
SMG8-203ENST00000578922 PTDSS1P48651 473 aaKnown RBP20.3■□□□□ 0.84
SMG8-203ENST00000578922 LIMK2P53671 638 aa20.3■□□□□ 0.84
SMG8-203ENST00000578922 DBN1Q16643 649 aa20.3■□□□□ 0.84
SMG8-203ENST00000578922 PPM1JQ5JR12 505 aa20.3■□□□□ 0.84
SMG8-203ENST00000578922 DGKKQ5KSL6 1271 aa20.3■□□□□ 0.84
SMG8-203ENST00000578922 PTAR1Q7Z6K3 402 aaPredicted RBP20.3■□□□□ 0.84
SMG8-203ENST00000578922 CAMK1DQ8IU85 385 aa20.3■□□□□ 0.84
SMG8-203ENST00000578922 EFHBQ8N7U6 833 aa20.3■□□□□ 0.84
SMG8-203ENST00000578922 OR13C4Q8NGS5 318 aa20.3■□□□□ 0.84
SMG8-203ENST00000578922 HDAC10Q969S8 669 aa20.3■□□□□ 0.84
SMG8-203ENST00000578922 DNAJC1Q96KC8 554 aaKnown RBP20.3■□□□□ 0.84
SMG8-203ENST00000578922 SUDS3Q9H7L9 328 aaPredicted RBP20.3■□□□□ 0.84
SMG8-203ENST00000578922 SIRPGQ9P1W8 387 aa20.3■□□□□ 0.84
SMG8-203ENST00000578922 CORO1CQ9ULV4 474 aaPredicted RBP20.3■□□□□ 0.84
SMG8-203ENST00000578922 PIGNO95427 931 aa20.29■□□□□ 0.84
SMG8-203ENST00000578922 PABPC1P11940 636 aaKnown RBP20.29■□□□□ 0.84
SMG8-203ENST00000578922 GABRB3P28472 473 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms