RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 MATN3O15232 486 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 ACSL4O60488 711 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 TCEA3O75764 348 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 CPP00450 1065 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 AGTP01019 485 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 IGLV3-27P01718 113 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 KLKB1P03952 638 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 CYBBP04839 570 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 GSTA2P09210 222 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 MLNP12872 115 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 VAV1P15498 845 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 TACR2P21452 398 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 CORO1AP31146 461 aaKnown RBP10.27□□□□□ -0.77
SS18-210ENST00000578700 ACSL1P33121 698 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 GRK6P43250 576 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 MAPKAPK2P49137 400 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 COPAP53621 1224 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 YBEYP58557 167 aaPredicted RBP10.27□□□□□ -0.77
SS18-210ENST00000578700 SEMG2Q02383 582 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 CAMK2BQ13554 666 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 SKIDA1Q1XH10 827 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 KLHL38Q2WGJ6 581 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 PARP15Q460N3 678 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 FNDC3BQ53EP0 1204 aaKnown RBP10.27□□□□□ -0.77
SS18-210ENST00000578700 PIK3R6Q5UE93 754 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 FYB2Q5VWT5 728 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 ANKRD22Q5VYY1 191 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 KCTD16Q68DU8 428 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 Q6ZNB5 142 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 DBX2Q6ZNG2 339 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 LRRC69Q6ZNQ3 347 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 CCNJLQ8IV13 435 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 DENND1CQ8IV53 801 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 CCDC117Q8IWD4 279 aaPredicted RBP10.27□□□□□ -0.77
SS18-210ENST00000578700 ZNF567Q8N184 647 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 UMODL1-AS1Q8N2C9 162 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 RIBC1Q8N443 379 aaPredicted RBP10.27□□□□□ -0.77
SS18-210ENST00000578700 NPWQ8N729 165 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 ZNF366Q8N895 744 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 FBXO36Q8NEA4 188 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 BAHD1Q8TBE0 780 aaPredicted RBP10.27□□□□□ -0.77
SS18-210ENST00000578700 DDI1Q8WTU0 396 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 CYB5D2Q8WUJ1 264 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 CELF6Q96J87 481 aaKnown RBP10.27□□□□□ -0.77
SS18-210ENST00000578700 SERPINB12Q96P63 405 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 UBL7Q96S82 380 aaPredicted RBP10.27□□□□□ -0.77
SS18-210ENST00000578700 TM9SF3Q9HD45 589 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 MPP6Q9NZW5 540 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 ZNF510Q9Y2H8 683 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 SLC27A6Q9Y2P4 619 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 AAR2Q9Y312 384 aaKnown RBP10.27□□□□□ -0.77
SS18-210ENST00000578700 AK5Q9Y6K8 562 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 IKBKGQ9Y6K9 419 aa10.27□□□□□ -0.77
SS18-210ENST00000578700 PTPRQQ9UMZ3 2332 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 IGLV3-10A0A075B6K4 115 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 DRGXA6NNA5 263 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 NPC1O15118 1278 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 TSPAN3O60637 253 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 RAMP2O60895 175 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 CDH16O75309 829 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 ANXA9O76027 345 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 TMEM63AO94886 807 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 METTL18O95568 372 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 LATS1O95835 1130 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 JCHAINP01591 159 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 SHBGP04278 402 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 CCNB1P14635 433 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 PTPN3P26045 913 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 OR1E1P30953 314 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 EIF2S3P41091 472 aaKnown RBP10.26□□□□□ -0.77
SS18-210ENST00000578700 CCT8P50990 548 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 RENBPP51606 427 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 WASHC5Q12768 1159 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 TEX44Q53QW1 395 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 FNBP1LQ5T0N5 605 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 FAXCQ5TGI0 409 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 TTC39BQ5VTQ0 682 aaPredicted RBP10.26□□□□□ -0.77
SS18-210ENST00000578700 FBXL22Q6P050 247 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 TFAP2DQ7Z6R9 452 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 C14orf80Q86SX3 495 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 LINC00523Q86TU6 105 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 GATAD2AQ86YP4 633 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 ANKMY2Q8IV38 441 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 LGI2Q8N0V4 545 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 CNPY4Q8N129 248 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 BBS5Q8N3I7 341 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 OR2T3Q8NH03 318 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 C1orf216Q8TAB5 229 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 GANCQ8TET4 914 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 LRRN4Q8WUT4 740 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 ARL8AQ96BM9 186 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 PWWP2AQ96N64 755 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 NAT9Q9BTE0 207 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 SLC39A8Q9C0K1 460 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 BTBD1Q9H0C5 482 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 GBA3Q9H227 469 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 LRRC40Q9H9A6 602 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 SP110Q9HB58 689 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 FTSJ1Q9UET6 329 aa10.26□□□□□ -0.77
SS18-210ENST00000578700 ZC3H7BQ9UGR2 993 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms