RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	VIPR1	P32241	457 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	COPS2	P61201	443 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	RPL26	P61254	145 aa	Known RBP	13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	HNRNPK	P61978	463 aa	Known RBP eCLIP	13.69	□□□□□ -0.22	6e-9	■□□□□ 9.6
CSNK1D-208	ENST00000578501	DSC2	Q02487	901 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	PDE1C	Q14123	709 aa	Predicted RBP	13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	IRF4	Q15306	451 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	PPP2R5E	Q16537	467 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	KIAA1328	Q86T90	577 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	NDUFAF2	Q8N183	169 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	CBARP	Q8N350	705 aa	Predicted RBP	13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	SLC25A45	Q8N413	288 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	LRRC57	Q8N9N7	239 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	MDM1	Q8TC05	714 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	KIAA1524	Q8TCG1	905 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	PDCD6IP	Q8WUM4	868 aa	Known RBP	13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	LRRN4	Q8WUT4	740 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	B4GALT6	Q9UBX8	382 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	FTSJ1	Q9UET6	329 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	RPL26L1	Q9UNX3	145 aa	Known RBP	13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	EFR3B	Q9Y2G0	817 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	RAX	Q9Y2V3	346 aa		13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	GCN1	Q92616	2671 aa	Known RBP	13.69	□□□□□ -0.22
CSNK1D-208	ENST00000578501	FLNB	O75369	2602 aa	Known RBP	13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	hCG_1818297	A0A087WSY0	165 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	CCDC66	A2RUB6	948 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501		H3BM21	787 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	TK2	O00142	265 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	KCNK1	O00180	336 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	PSMD11	O00231	422 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	RECQL5	O94762	991 aa	Predicted RBP	13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	HEXIM1	O94992	359 aa	Known RBP	13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	LDOC1	O95751	146 aa	Predicted RBP	13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	HOXC4	P09017	264 aa	Predicted RBP	13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	GM2A	P17900	193 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	MARCKSL1	P49006	195 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	THOP1	P52888	689 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	NAP1L1	P55209	391 aa	Known RBP	13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	SEMG2	Q02383	582 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	NIPAL4	Q0D2K0	466 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	AP1B1	Q10567	949 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	KIF5A	Q12840	1032 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	ZNF211	Q13398	564 aa	Predicted RBP	13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	MTM1	Q13496	603 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	IHH	Q14623	411 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	NPNT	Q6UXI9	565 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	MACC1	Q6ZN28	852 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	USP45	Q70EL2	814 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	SLCO6A1	Q86UG4	719 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	EID2	Q8N6I1	236 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	CNTD1	Q8N815	330 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	BTN2A2	Q8WVV5	523 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	KRT35	Q92764	455 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	TBATA	Q96M53	351 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	COQ10A	Q96MF6	247 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	DNAJC28	Q9NX36	388 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	PCDHGA1	Q9Y5H4	931 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	CSNK1G3	Q9Y6M4	447 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	SHROOM3	Q8TF72	1996 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	SETX	Q7Z333	2677 aa	Known RBP	13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	ANKRD36	A6QL64	1941 aa		13.68	□□□□□ -0.22
CSNK1D-208	ENST00000578501	GRID2IP	A4D2P6	1211 aa		13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	NEMP2	A6NFY4	417 aa		13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	ENC1	O14682	589 aa		13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	SDC3	O75056	442 aa		13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	PDHA1	P08559	390 aa		13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	C1S	P09871	688 aa		13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	ATXN1L	P0C7T5	689 aa	Known RBP	13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	CDK4	P11802	303 aa		13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	CTNNA2	P26232	953 aa		13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	PTPN7	P35236	360 aa		13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	DYNLT1	P63172	113 aa		13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	ZBTB17	Q13105	803 aa		13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	EIF2B5	Q13144	721 aa	Known RBP	13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	INPP5A	Q14642	412 aa		13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	PRKD1	Q15139	912 aa	Predicted RBP	13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	CNGA3	Q16281	694 aa		13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	TPRG1L	Q5T0D9	272 aa		13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	KAZN	Q674X7	775 aa		13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	RAVER1	Q8IY67	606 aa	Known RBP	13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	SYCE1	Q8N0S2	351 aa		13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	PNPLA1	Q8N8W4	532 aa		13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	OR4C6	Q8NH72	309 aa		13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	TFB1M	Q8WVM0	346 aa	Known RBP	13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	P3H4	Q92791	437 aa		13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	CNDP2	Q96KP4	475 aa	Known RBP	13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	UBL7	Q96S82	380 aa	Predicted RBP	13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	APOO	Q9BUR5	198 aa		13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	TDRD1	Q9BXT4	1180 aa	Known RBP	13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	UCKL1	Q9NWZ5	548 aa		13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	KLF15	Q9UIH9	416 aa		13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	DNPEP	Q9ULA0	475 aa		13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501	TTLL3	Q9Y4R7	772 aa		13.67	□□□□□ -0.22
CSNK1D-208	ENST00000578501		A0A0J9YYE9	177 aa		13.66	□□□□□ -0.22
CSNK1D-208	ENST00000578501	NPIPB15	A6NHN6	443 aa	Predicted RBP	13.66	□□□□□ -0.22
CSNK1D-208	ENST00000578501		A8MX80	341 aa		13.66	□□□□□ -0.22
CSNK1D-208	ENST00000578501	HACD1	B0YJ81	288 aa		13.66	□□□□□ -0.22
CSNK1D-208	ENST00000578501	SCAMP1	O15126	338 aa		13.66	□□□□□ -0.22
CSNK1D-208	ENST00000578501	MTSS1	O43312	755 aa		13.66	□□□□□ -0.22

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