RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 CLEC18BQ6UXF7 455 aa13.4□□□□□ -0.26
COPS3-214ENST00000577246 SLFN11Q7Z7L1 901 aa13.4□□□□□ -0.26
COPS3-214ENST00000577246 ATCAYQ86WG3 371 aa13.4□□□□□ -0.26
COPS3-214ENST00000577246 C17orf82Q86X59 251 aaPredicted RBP13.4□□□□□ -0.26
COPS3-214ENST00000577246 PLA2G15Q8NCC3 412 aa13.4□□□□□ -0.26
COPS3-214ENST00000577246 CLEC18CQ8NCF0 446 aa13.4□□□□□ -0.26
COPS3-214ENST00000577246 FAM172AQ8WUF8 416 aa13.4□□□□□ -0.26
COPS3-214ENST00000577246 ART4Q93070 314 aa13.4□□□□□ -0.26
COPS3-214ENST00000577246 SLC45A3Q96JT2 553 aa13.4□□□□□ -0.26
COPS3-214ENST00000577246 NUDT22Q9BRQ3 303 aa13.4□□□□□ -0.26
COPS3-214ENST00000577246 ZMYND15Q9H091 742 aa13.4□□□□□ -0.26
COPS3-214ENST00000577246 CARS2Q9HA77 564 aaKnown RBP13.4□□□□□ -0.26
COPS3-214ENST00000577246 SLC39A1Q9NY26 324 aa13.4□□□□□ -0.26
COPS3-214ENST00000577246 MAN2B2Q9Y2E5 1009 aa13.4□□□□□ -0.26
COPS3-214ENST00000577246 DOCK4Q8N1I0 1966 aa13.4□□□□□ -0.27
COPS3-214ENST00000577246 C2CD4BA6NLJ0 364 aa13.39□□□□□ -0.27
COPS3-214ENST00000577246 B4E171 279 aa13.39□□□□□ -0.27
COPS3-214ENST00000577246 FGF10O15520 208 aaPredicted RBP13.39□□□□□ -0.27
COPS3-214ENST00000577246 RAD1O60671 282 aa13.39□□□□□ -0.27
COPS3-214ENST00000577246 MYCLP1P12525 358 aaPredicted RBP13.39□□□□□ -0.27
COPS3-214ENST00000577246 DESP17661 470 aa13.39□□□□□ -0.27
COPS3-214ENST00000577246 MMP8P22894 467 aa13.39□□□□□ -0.27
COPS3-214ENST00000577246 CD1CP29017 333 aa13.39□□□□□ -0.27
COPS3-214ENST00000577246 TSPAN7P41732 249 aa13.39□□□□□ -0.27
COPS3-214ENST00000577246 CSNK1DP48730 415 aa13.39□□□□□ -0.27
COPS3-214ENST00000577246 MAZP56270 477 aaKnown RBP13.39□□□□□ -0.27
COPS3-214ENST00000577246 MC1RQ01726 317 aa13.39□□□□□ -0.27
COPS3-214ENST00000577246 CYTH1Q15438 398 aa13.39□□□□□ -0.27
COPS3-214ENST00000577246 IGFBP7Q16270 282 aa13.39□□□□□ -0.27
COPS3-214ENST00000577246 C4orf17Q53FE4 359 aa13.39□□□□□ -0.27
COPS3-214ENST00000577246 KCTD16Q68DU8 428 aa13.39□□□□□ -0.27
COPS3-214ENST00000577246 NOP9Q86U38 636 aaKnown RBP13.39□□□□□ -0.27
COPS3-214ENST00000577246 UMODL1-AS1Q8N2C9 162 aa13.39□□□□□ -0.27
COPS3-214ENST00000577246 CCDC185Q8N715 623 aa13.39□□□□□ -0.27
COPS3-214ENST00000577246 APOBEC4Q8WW27 367 aaKnown RBP13.39□□□□□ -0.27
COPS3-214ENST00000577246 CENPIQ92674 756 aaPredicted RBP13.39□□□□□ -0.27
COPS3-214ENST00000577246 NDST4Q9H3R1 872 aa13.39□□□□□ -0.27
COPS3-214ENST00000577246 NOL6Q9H6R4 1146 aaKnown RBP13.39□□□□□ -0.27
COPS3-214ENST00000577246 GPN2Q9H9Y4 310 aaPredicted RBP13.39□□□□□ -0.27
COPS3-214ENST00000577246 PHPT1Q9NRX4 125 aaPredicted RBP13.39□□□□□ -0.27
COPS3-214ENST00000577246 TRNAU1APQ9NX07 287 aaKnown RBP13.39□□□□□ -0.27
COPS3-214ENST00000577246 B3GALT1Q9Y5Z6 326 aa13.39□□□□□ -0.27
COPS3-214ENST00000577246 SCN8AQ9UQD0 1980 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 FAM170AA1A519 330 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 WASH4PA8MWX3 477 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 ECEL1O95672 775 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 FGF1P05230 155 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 MMEP08473 750 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 THRAP10827 490 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 KRT3P12035 628 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 NFKBIAP25963 317 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 MAP4P27816 1152 aaKnown RBP13.38□□□□□ -0.27
COPS3-214ENST00000577246 ERCC5P28715 1186 aaPredicted RBP13.38□□□□□ -0.27
COPS3-214ENST00000577246 HTR7P34969 479 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 AIF1P55008 147 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 HDAC4P56524 1084 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 GPLD1P80108 840 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 BCL2L1Q07817 233 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 SQSTM1Q13501 440 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 AFMIDQ63HM1 303 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 PNCKQ6P2M8 343 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 LIPIQ6XZB0 460 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 NYAP1Q6ZVC0 841 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 DPPA4Q7L190 304 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 FAM129CQ86XR2 697 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 CAMK1DQ8IU85 385 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 SFTPA2Q8IWL1 248 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 NRSN1Q8IZ57 195 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 NLGN4XQ8N0W4 816 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 NETO2Q8NC67 525 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 NLGN4YQ8NFZ3 816 aaPredicted RBP13.38□□□□□ -0.27
COPS3-214ENST00000577246 CCL4L1Q8NHW4 92 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 GPT2Q8TD30 523 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 EPS8L1Q8TE68 723 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 ZPBPQ9BS86 351 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 KLC2Q9H0B6 622 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 LRRC4CQ9HCJ2 640 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 SPATS2LQ9NUQ6 558 aaKnown RBP13.38□□□□□ -0.27
COPS3-214ENST00000577246 TAAR2Q9P1P5 351 aa13.38□□□□□ -0.27
COPS3-214ENST00000577246 ANKRD62A6NC57 917 aa13.37□□□□□ -0.27
COPS3-214ENST00000577246 F8VZ95 297 aa13.37□□□□□ -0.27
COPS3-214ENST00000577246 TEX33O43247 280 aa13.37□□□□□ -0.27
COPS3-214ENST00000577246 CREB3O43889 395 aa13.37□□□□□ -0.27
COPS3-214ENST00000577246 GPD1P21695 349 aa13.37□□□□□ -0.27
COPS3-214ENST00000577246 ARSDP51689 593 aa13.37□□□□□ -0.27
COPS3-214ENST00000577246 NDST2P52849 883 aa13.37□□□□□ -0.27
COPS3-214ENST00000577246 COPB1P53618 953 aaKnown RBP13.37□□□□□ -0.27
COPS3-214ENST00000577246 CDC20Q12834 499 aa13.37□□□□□ -0.27
COPS3-214ENST00000577246 RALGDSQ12967 914 aa13.37□□□□□ -0.27
COPS3-214ENST00000577246 ACOX1Q15067 660 aa13.37□□□□□ -0.27
COPS3-214ENST00000577246 VWA3BQ502W6 1294 aa13.37□□□□□ -0.27
COPS3-214ENST00000577246 LACTB2Q53H82 288 aaPredicted RBP13.37□□□□□ -0.27
COPS3-214ENST00000577246 RAB6CQ53S08 254 aa13.37□□□□□ -0.27
COPS3-214ENST00000577246 KLHDC7AQ5VTJ3 777 aa13.37□□□□□ -0.27
COPS3-214ENST00000577246 TRIM72Q6ZMU5 477 aa13.37□□□□□ -0.27
COPS3-214ENST00000577246 SRLQ86TD4 932 aa13.37□□□□□ -0.27
COPS3-214ENST00000577246 AHCYL2Q96HN2 611 aaKnown RBP13.37□□□□□ -0.27
COPS3-214ENST00000577246 PSMG3-AS1Q96PY0 264 aa13.37□□□□□ -0.27
COPS3-214ENST00000577246 LGR4Q9BXB1 951 aa13.37□□□□□ -0.27
COPS3-214ENST00000577246 STK33Q9BYT3 514 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms