RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 OR4D9Q8NGE8 314 aa11.98□□□□□ -0.49
CTNS-208ENST00000574218 ABHD17AQ96GS6 310 aa11.98□□□□□ -0.49
CTNS-208ENST00000574218 AHCYL2Q96HN2 611 aaKnown RBP11.98□□□□□ -0.49
CTNS-208ENST00000574218 CARS2Q9HA77 564 aaKnown RBP11.98□□□□□ -0.49
CTNS-208ENST00000574218 METTL5Q9NRN9 209 aaKnown RBP11.98□□□□□ -0.49
CTNS-208ENST00000574218 DNAJC12Q9UKB3 198 aa11.98□□□□□ -0.49
CTNS-208ENST00000574218 FAM170AA1A519 330 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 PRSS38A1L453 326 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 GTPBP10A4D1E9 387 aaKnown RBP11.97□□□□□ -0.49
CTNS-208ENST00000574218 CFAP69A5D8W1 941 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 PRR19A6NJB7 356 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 EFCAB7A8K855 629 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 PPP1R3GB7ZBB8 358 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 FOXN3O00409 490 aaPredicted RBP11.97□□□□□ -0.49
CTNS-208ENST00000574218 NKX2-8O15522 239 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 DUX1O43812 170 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 VPS4BO75351 444 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 RECQL5O94762 991 aaPredicted RBP11.97□□□□□ -0.49
CTNS-208ENST00000574218 LRIG2O94898 1065 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 ECEL1O95672 775 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 PLEKP08567 350 aaPredicted RBP11.97□□□□□ -0.49
CTNS-208ENST00000574218 HOXC4P09017 264 aaPredicted RBP11.97□□□□□ -0.49
CTNS-208ENST00000574218 TCN2P20062 427 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 SERPINA4P29622 427 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 CDH5P33151 784 aaPredicted RBP11.97□□□□□ -0.49
CTNS-208ENST00000574218 CLCN1P35523 988 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 MTIF2P46199 727 aaKnown RBP11.97□□□□□ -0.49
CTNS-208ENST00000574218 YBEYP58557 167 aaPredicted RBP11.97□□□□□ -0.49
CTNS-208ENST00000574218 APBA1Q02410 837 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 RAPGEF1Q13905 1077 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 FHL5Q5TD97 284 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 MANEALQ5VSG8 457 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 TAF3Q5VWG9 929 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 C16orf46Q6P387 395 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 CEACAM20Q6UY09 585 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 ZNF438Q7Z4V0 828 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 NETO2Q8NC67 525 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 CCL4L1Q8NHW4 92 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 PMEPA1Q969W9 287 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 MIB2Q96AX9 1013 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 ZNF641Q96N77 438 aaPredicted RBP11.97□□□□□ -0.49
CTNS-208ENST00000574218 TRIT1Q9H3H1 467 aaKnown RBP11.97□□□□□ -0.49
CTNS-208ENST00000574218 ATP13A3Q9H7F0 1226 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 PHPT1Q9NRX4 125 aaPredicted RBP11.97□□□□□ -0.49
CTNS-208ENST00000574218 TAAR2Q9P1P5 351 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 UBA2Q9UBT2 640 aaPredicted RBP11.97□□□□□ -0.49
CTNS-208ENST00000574218 PLEKHB1Q9UF11 243 aaPredicted RBP11.97□□□□□ -0.49
CTNS-208ENST00000574218 VPS4AQ9UN37 437 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 ZDHHC9Q9Y397 364 aa11.97□□□□□ -0.49
CTNS-208ENST00000574218 TSPAN11A1L157 253 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 B4E171 279 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 MKRN2OSH3BPM6 223 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 BIN1O00499 593 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 MTSS1O43312 755 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 LSM8O95777 96 aaKnown RBP11.96□□□□□ -0.49
CTNS-208ENST00000574218 PRKCGP05129 697 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 PNMA6AP0CW24 399 aaPredicted RBP11.96□□□□□ -0.49
CTNS-208ENST00000574218 THRAP10827 490 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 MPSTP25325 297 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 PON1P27169 355 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 CD1CP29017 333 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 TSPAN7P41732 249 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 GNPDA1P46926 289 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 POLR2LP62875 67 aaKnown RBP11.96□□□□□ -0.49
CTNS-208ENST00000574218 NR1D2Q14995 579 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 ACOX1Q15067 660 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 PARP15Q460N3 678 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 C2CD6Q53TS8 623 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 ARTNQ5T4W7 220 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 ANKS6Q68DC2 871 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 KCTD16Q68DU8 428 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 SLC30A9Q6PML9 568 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 ARCQ7LC44 396 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 BNIPLQ7Z465 357 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 EMC1Q8N766 993 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 RTL3Q8N8U3 475 aaKnown RBP11.96□□□□□ -0.49
CTNS-208ENST00000574218 TUBGCP5Q96RT8 1024 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 ZPBPQ9BS86 351 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 CATSPERBQ9H7T0 1116 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 SPATS2LQ9NUQ6 558 aaKnown RBP11.96□□□□□ -0.49
CTNS-208ENST00000574218 KCNK4Q9NYG8 393 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 LHX3Q9UBR4 397 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 TMEM59LQ9UK28 342 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 TP53TG5Q9Y2B4 290 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 KCTD3Q9Y597 815 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 PCDHB3Q9Y5E6 796 aa11.96□□□□□ -0.49
CTNS-208ENST00000574218 UNC79Q9P2D8 2635 aa11.96□□□□□ -0.5
CTNS-208ENST00000574218 GOLGA6CA6NDK9 693 aa11.95□□□□□ -0.5
CTNS-208ENST00000574218 GOLGA6BA6NDN3 693 aa11.95□□□□□ -0.5
CTNS-208ENST00000574218 RASA4BC9J798 803 aa11.95□□□□□ -0.5
CTNS-208ENST00000574218 FAM72CH0Y354 149 aa11.95□□□□□ -0.5
CTNS-208ENST00000574218 RASA4O43374 803 aa11.95□□□□□ -0.5
CTNS-208ENST00000574218 FGF1P05230 155 aa11.95□□□□□ -0.5
CTNS-208ENST00000574218 GOLGA6DP0CG33 693 aa11.95□□□□□ -0.5
CTNS-208ENST00000574218 MYCLP1P12525 358 aaPredicted RBP11.95□□□□□ -0.5
CTNS-208ENST00000574218 CYP11B1P15538 503 aa11.95□□□□□ -0.5
CTNS-208ENST00000574218 ERCC5P28715 1186 aaPredicted RBP11.95□□□□□ -0.5
CTNS-208ENST00000574218 EPHB2P29323 1055 aa11.95□□□□□ -0.5
CTNS-208ENST00000574218 CD97P48960 835 aa11.95□□□□□ -0.5
CTNS-208ENST00000574218 ARSDP51689 593 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms