RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 MAP10Q9P2G4 905 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 GIMAP2Q9UG22 337 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 NME4O00746 187 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 PSEN2P49810 448 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 CDH13P55290 713 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 PRAMEP78395 509 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 DCTN2Q13561 401 aaKnown RBP19.12■□□□□ 0.65
SCARF1-206ENST00000573852 TIGD5Q53EQ6 642 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 UNC50Q53HI1 259 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 IL31Q6EBC2 164 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 ERMP1Q7Z2K6 904 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 ISCA2Q86U28 154 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 PIM3Q86V86 326 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 GTF3C2Q8WUA4 911 aaPredicted RBP19.12■□□□□ 0.65
SCARF1-206ENST00000573852 TSPAN17Q96FV3 270 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 UPF3AQ9H1J1 476 aaKnown RBP19.12■□□□□ 0.65
SCARF1-206ENST00000573852 CATSPERBQ9H7T0 1116 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 AKTIPQ9H8T0 292 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 CLK4Q9HAZ1 481 aaKnown RBP19.12■□□□□ 0.65
SCARF1-206ENST00000573852 TBC1D13Q9NVG8 400 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 PTGDR2Q9Y5Y4 395 aa19.12■□□□□ 0.65
SCARF1-206ENST00000573852 CASTOR2A6NHX0 329 aa19.11■□□□□ 0.65
SCARF1-206ENST00000573852 FGF10O15520 208 aaPredicted RBP19.11■□□□□ 0.65
SCARF1-206ENST00000573852 GNAO1P09471 354 aa19.11■□□□□ 0.65
SCARF1-206ENST00000573852 HSPA8P11142 646 aaKnown RBP19.11■□□□□ 0.65
SCARF1-206ENST00000573852 UGT1A6P19224 532 aa19.11■□□□□ 0.65
SCARF1-206ENST00000573852 YBX1P67809 324 aaKnown RBP19.11■□□□□ 0.65
SCARF1-206ENST00000573852 GRB14Q14449 540 aa19.11■□□□□ 0.65
SCARF1-206ENST00000573852 C14orf80Q86SX3 495 aa19.11■□□□□ 0.65
SCARF1-206ENST00000573852 CILP2Q8IUL8 1156 aa19.11■□□□□ 0.65
SCARF1-206ENST00000573852 CALML6Q8TD86 181 aa19.11■□□□□ 0.65
SCARF1-206ENST00000573852 TCF12Q99081 682 aa19.11■□□□□ 0.65
SCARF1-206ENST00000573852 GPATCH1Q9BRR8 931 aaKnown RBP19.11■□□□□ 0.65
SCARF1-206ENST00000573852 SLC38A7Q9NVC3 462 aa19.11■□□□□ 0.65
SCARF1-206ENST00000573852 SQORQ9Y6N5 450 aa19.11■□□□□ 0.65
SCARF1-206ENST00000573852 MIA3Q5JRA6 1907 aa19.11■□□□□ 0.65
SCARF1-206ENST00000573852 PPP6CO00743 305 aa19.11■□□□□ 0.65
SCARF1-206ENST00000573852 DLGAP1O14490 977 aa19.11■□□□□ 0.65
SCARF1-206ENST00000573852 WISP3O95389 354 aaPredicted RBP19.11■□□□□ 0.65
SCARF1-206ENST00000573852 THP07101 528 aa19.11■□□□□ 0.65
SCARF1-206ENST00000573852 ATP4BP51164 291 aa19.11■□□□□ 0.65
SCARF1-206ENST00000573852 MAP7D1Q3KQU3 841 aa19.11■□□□□ 0.65
SCARF1-206ENST00000573852 DIS3LQ8TF46 1054 aaKnown RBP19.11■□□□□ 0.65
SCARF1-206ENST00000573852 ROPN1LQ96C74 230 aa19.11■□□□□ 0.65
SCARF1-206ENST00000573852 L3HYPDHQ96EM0 354 aa19.11■□□□□ 0.65
SCARF1-206ENST00000573852 TRMOQ9BU70 441 aa19.11■□□□□ 0.65
SCARF1-206ENST00000573852 ARNT2Q9HBZ2 717 aa19.11■□□□□ 0.65
SCARF1-206ENST00000573852 CCM2LQ9NUG4 571 aaPredicted RBP19.11■□□□□ 0.65
SCARF1-206ENST00000573852 NUDT5Q9UKK9 219 aa19.11■□□□□ 0.65
SCARF1-206ENST00000573852 NR5A2O00482 541 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 PCSK1P29120 753 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 SERPINH1P50454 418 aaKnown RBP19.1■□□□□ 0.65
SCARF1-206ENST00000573852 GALK1P51570 392 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 ARSDP51689 593 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 STX1BP61266 288 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 TUBA4AP68366 448 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 SH3BP2P78314 561 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 PLOD1Q02809 727 aaPredicted RBP19.1■□□□□ 0.65
SCARF1-206ENST00000573852 IHHQ14623 411 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 AFMIDQ63HM1 303 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 HM13Q8TCT9 377 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 CASP10Q92851 521 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 PTERQ96BW5 349 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 PPP1R2P1Q96PQ5 205 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 LMCD1Q9NZU5 365 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 MARCH4Q9P2E8 410 aaPredicted RBP19.1■□□□□ 0.65
SCARF1-206ENST00000573852 SLC8A2Q9UPR5 921 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 AURKCQ9UQB9 309 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 A0A0J9YYE9 177 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 FAM149AA5PLN7 773 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 C9JVG2 144 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 ADARP55265 1226 aaKnown RBP19.1■□□□□ 0.65
SCARF1-206ENST00000573852 MAXP61244 160 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 KIF19Q2TAC6 998 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 PAN2Q504Q3 1202 aaKnown RBP19.1■□□□□ 0.65
SCARF1-206ENST00000573852 IRAK1BP1Q5VVH5 260 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 TIGD7Q6NT04 549 aaPredicted RBP19.1■□□□□ 0.65
SCARF1-206ENST00000573852 EPHX4Q8IUS5 362 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 CBR4Q8N4T8 237 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 EXT2Q93063 718 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 SMOXQ9NWM0 555 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 HACD3Q9P035 362 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 EGFL7Q9UHF1 273 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 DNAJC15Q9Y5T4 150 aa19.1■□□□□ 0.65
SCARF1-206ENST00000573852 OR51F1A6NGY5 319 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 BMP10O95393 424 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 STAMBPO95630 424 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 S1PR4O95977 384 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 MOCS2O96007 188 aaPredicted RBP19.09■□□□□ 0.65
SCARF1-206ENST00000573852 VPS26BQ4G0F5 336 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 BRMS1LQ5PSV4 323 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 TBCELQ5QJ74 424 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 SPPL2CQ8IUH8 684 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 PCYOX1LQ8NBM8 494 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 OR52K2Q8NGK3 314 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 OR6P1Q8NGX9 317 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 ZUFSPQ96AP4 578 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 TMEM209Q96SK2 561 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 SLC25A51Q9H1U9 297 aa19.09■□□□□ 0.65
SCARF1-206ENST00000573852 ATP13A1Q9HD20 1204 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms