RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 TMEM202A6NGA9 273 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 NPIPB15A6NHN6 443 aaPredicted RBP17.36■□□□□ 0.37
SMG6-212ENST00000573153 HEXIM1O94992 359 aaKnown RBP17.36■□□□□ 0.37
SMG6-212ENST00000573153 PGLSO95336 258 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 MT-CO3P00414 261 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 JUPP14923 745 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 SSR1P43307 286 aaKnown RBP17.36■□□□□ 0.37
SMG6-212ENST00000573153 MMP13P45452 471 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 PDX1P52945 283 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 POLR2LP62875 67 aaKnown RBP17.36■□□□□ 0.37
SMG6-212ENST00000573153 DAB2P98082 770 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 ZNF235Q14590 738 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 PRRT3Q5FWE3 981 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 ESRP1Q6NXG1 681 aaKnown RBP17.36■□□□□ 0.37
SMG6-212ENST00000573153 TSPAN33Q86UF1 283 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 BBS5Q8N3I7 341 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 PLD5Q8N7P1 536 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 KCTD6Q8NC69 237 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 BTN2A2Q8WVV5 523 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 OR1E3Q8WZA6 343 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 TSACCQ96A04 125 aaPredicted RBP17.36■□□□□ 0.37
SMG6-212ENST00000573153 TSGA13Q96PP4 275 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 TRIM5Q9C035 493 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 NRSN2Q9GZP1 204 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 SPASTQ9UBP0 616 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 AMACRQ9UHK6 382 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 CLCA2Q9UQC9 943 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 LOC400499M0QZD8 3231 aa17.36■□□□□ 0.37
SMG6-212ENST00000573153 A0A087WV48 116 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 A8MX80 341 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 LCA5LO95447 670 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 SOD1P00441 154 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 CPP00450 1065 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 PRLP01236 227 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 FUCA1P04066 466 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 HOXC4P09017 264 aaPredicted RBP17.35■□□□□ 0.37
SMG6-212ENST00000573153 ELFN1P0C7U0 828 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 ALPPL2P10696 532 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 TGM2P21980 687 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 HNF1BP35680 557 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 GJC1P36383 396 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 HADHBP55084 474 aaKnown RBP17.35■□□□□ 0.37
SMG6-212ENST00000573153 E2F1Q01094 437 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 PPARDQ03181 441 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 NIPAL4Q0D2K0 466 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 CDKN3Q16667 212 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 FAM182AQ5T1J6 154 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 CFAP58Q5T655 872 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 MARC1Q5VT66 337 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 LRRC38Q5VT99 294 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 RFLNAQ6ZTI6 216 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 HSD11B1LQ7Z5J1 315 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 SFTPA2Q8IWL1 248 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 IFI44Q8TCB0 444 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 NSMCE1Q8WV22 266 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 PTCD2Q8WV60 388 aaKnown RBP17.35■□□□□ 0.37
SMG6-212ENST00000573153 MRFAP1L1Q96HT8 127 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 NT5MQ9NPB1 228 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 SCUBE2Q9NQ36 999 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 DTLQ9NZJ0 730 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 DGKBQ9Y6T7 804 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 RP1P56715 2156 aa17.35■□□□□ 0.37
SMG6-212ENST00000573153 MATN3O15232 486 aa17.34■□□□□ 0.37
SMG6-212ENST00000573153 HLA-DQB2P05538 268 aa17.34■□□□□ 0.37
SMG6-212ENST00000573153 MMP2P08253 660 aa17.34■□□□□ 0.37
SMG6-212ENST00000573153 KDELR1P24390 212 aa17.34■□□□□ 0.37
SMG6-212ENST00000573153 CCNCP24863 283 aa17.34■□□□□ 0.37
SMG6-212ENST00000573153 VIPR1P32241 457 aa17.34■□□□□ 0.37
SMG6-212ENST00000573153 DSC2Q02487 901 aa17.34■□□□□ 0.37
SMG6-212ENST00000573153 MESDQ14696 234 aa17.34■□□□□ 0.37
SMG6-212ENST00000573153 IFI16Q16666 785 aaKnown RBP17.34■□□□□ 0.37
SMG6-212ENST00000573153 TECPR1Q7Z6L1 1165 aa17.34■□□□□ 0.37
SMG6-212ENST00000573153 CNTD1Q8N815 330 aa17.34■□□□□ 0.37
SMG6-212ENST00000573153 HDAC11Q96DB2 347 aa17.34■□□□□ 0.37
SMG6-212ENST00000573153 NXPE2Q96DL1 559 aa17.34■□□□□ 0.37
SMG6-212ENST00000573153 DTD2Q96FN9 168 aa17.34■□□□□ 0.37
SMG6-212ENST00000573153 SCRN2Q96FV2 425 aa17.34■□□□□ 0.37
SMG6-212ENST00000573153 RNF157Q96PX1 679 aa17.34■□□□□ 0.37
SMG6-212ENST00000573153 RBM15Q96T37 977 aaKnown RBP eCLIP17.34■□□□□ 0.37
SMG6-212ENST00000573153 SEMA3CQ99985 751 aa17.34■□□□□ 0.37
SMG6-212ENST00000573153 MRPL40Q9NQ50 206 aaKnown RBP17.34■□□□□ 0.37
SMG6-212ENST00000573153 RABGEF1Q9UJ41 708 aa17.34■□□□□ 0.37
SMG6-212ENST00000573153 ST14Q9Y5Y6 855 aa17.34■□□□□ 0.37
SMG6-212ENST00000573153 TMEM110-MUSTN1A8MSY1 372 aa17.33■□□□□ 0.36
SMG6-212ENST00000573153 ALPIP09923 528 aa17.33■□□□□ 0.36
SMG6-212ENST00000573153 MX2P20592 715 aa17.33■□□□□ 0.36
SMG6-212ENST00000573153 FECHP22830 423 aa17.33■□□□□ 0.36
SMG6-212ENST00000573153 SLC1A1P43005 524 aa17.33■□□□□ 0.36
SMG6-212ENST00000573153 SRP54P61011 504 aaKnown RBP17.33■□□□□ 0.36
SMG6-212ENST00000573153 SLC9A4Q6AI14 798 aa17.33■□□□□ 0.36
SMG6-212ENST00000573153 TIGD7Q6NT04 549 aaPredicted RBP17.33■□□□□ 0.36
SMG6-212ENST00000573153 PNCKQ6P2M8 343 aa17.33■□□□□ 0.36
SMG6-212ENST00000573153 ENPP7Q6UWV6 458 aa17.33■□□□□ 0.36
SMG6-212ENST00000573153 EFL1Q7Z2Z2 1120 aaKnown RBP17.33■□□□□ 0.36
SMG6-212ENST00000573153 CCDC170Q8IYT3 715 aa17.33■□□□□ 0.36
SMG6-212ENST00000573153 KYQ8NBH2 561 aa17.33■□□□□ 0.36
SMG6-212ENST00000573153 WDR92Q96MX6 357 aa17.33■□□□□ 0.36
SMG6-212ENST00000573153 OLFM3Q96PB7 478 aa17.33■□□□□ 0.36
SMG6-212ENST00000573153 TDRD1Q9BXT4 1180 aaKnown RBP17.33■□□□□ 0.36
SMG6-212ENST00000573153 PHTF1Q9UMS5 762 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms