RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 NUDCD1Q96RS6 583 aa18.17■□□□□ 0.5
CHD3-214ENST00000572579 MGME1Q9BQP7 344 aa18.17■□□□□ 0.5
CHD3-214ENST00000572579 NUP85Q9BW27 656 aa18.17■□□□□ 0.5
CHD3-214ENST00000572579 KLQ9UEF7 1012 aa18.17■□□□□ 0.5
CHD3-214ENST00000572579 LRRK1Q38SD2 2015 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 PRB1P04280 392 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 SERPING1P05155 500 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 HOXC4P09017 264 aaPredicted RBP18.16■□□□□ 0.5
CHD3-214ENST00000572579 ELFN1P0C7U0 828 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 KIAA1024LP59773 190 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 CCL7P80098 99 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 SKOR1P84550 965 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 ZBED6P86452 979 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 CNGA3Q16281 694 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 TDRD12Q587J7 1177 aaKnown RBP18.16■□□□□ 0.5
CHD3-214ENST00000572579 C3orf38Q5JPI3 329 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 PNCKQ6P2M8 343 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 OGFOD3Q6PK18 319 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 TMCO3Q6UWJ1 677 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 LRRC69Q6ZNQ3 347 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 RBM44Q6ZP01 1051 aaKnown RBP18.16■□□□□ 0.5
CHD3-214ENST00000572579 HSD11B1LQ7Z5J1 315 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 GPR156Q8NFN8 814 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 TPCN2Q8NHX9 752 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 LRRN4Q8WUT4 740 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 TEKT4Q8WW24 435 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 CCDC74AQ96AQ1 378 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 TMEM168Q9H0V1 697 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 EVA1BQ9NVM1 165 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 ANAPC7Q9UJX3 599 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 GPR34Q9UPC5 381 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 SSUH2Q9Y2M2 353 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 ST14Q9Y5Y6 855 aa18.16■□□□□ 0.5
CHD3-214ENST00000572579 ATMQ13315 3056 aa18.15■□□□□ 0.5
CHD3-214ENST00000572579 NOBOXO60393 691 aa18.15■□□□□ 0.5
CHD3-214ENST00000572579 HEXIM1O94992 359 aaKnown RBP18.15■□□□□ 0.5
CHD3-214ENST00000572579 CTSEP14091 401 aa18.15■□□□□ 0.5
CHD3-214ENST00000572579 HTR1BP28222 390 aa18.15■□□□□ 0.5
CHD3-214ENST00000572579 RPIAP49247 311 aa18.15■□□□□ 0.5
CHD3-214ENST00000572579 BLKP51451 505 aa18.15■□□□□ 0.5
CHD3-214ENST00000572579 RENBPP51606 427 aa18.15■□□□□ 0.5
CHD3-214ENST00000572579 ERVPABLB-1P60509 514 aa18.15■□□□□ 0.5
CHD3-214ENST00000572579 POLR2LP62875 67 aaKnown RBP18.15■□□□□ 0.5
CHD3-214ENST00000572579 ELOCQ15369 112 aa18.15■□□□□ 0.5
CHD3-214ENST00000572579 TSPAN33Q86UF1 283 aa18.15■□□□□ 0.5
CHD3-214ENST00000572579 TEX26Q8N6G2 289 aa18.15■□□□□ 0.5
CHD3-214ENST00000572579 OR56A4Q8NGH8 313 aa18.15■□□□□ 0.5
CHD3-214ENST00000572579 NAT6Q93015 286 aa18.15■□□□□ 0.5
CHD3-214ENST00000572579 BZW2Q9Y6E2 419 aaKnown RBP18.15■□□□□ 0.5
CHD3-214ENST00000572579 NPIPB15A6NHN6 443 aaPredicted RBP18.14■□□□□ 0.49
CHD3-214ENST00000572579 TCEA3O75764 348 aa18.14■□□□□ 0.49
CHD3-214ENST00000572579 C1QL1O75973 258 aa18.14■□□□□ 0.49
CHD3-214ENST00000572579 TNFP01375 233 aa18.14■□□□□ 0.49
CHD3-214ENST00000572579 PDHA1P08559 390 aa18.14■□□□□ 0.49
CHD3-214ENST00000572579 ALPIP09923 528 aa18.14■□□□□ 0.49
CHD3-214ENST00000572579 ARL4AP40617 200 aa18.14■□□□□ 0.49
CHD3-214ENST00000572579 ETV3P41162 512 aa18.14■□□□□ 0.49
CHD3-214ENST00000572579 TAS2R40P59535 323 aa18.14■□□□□ 0.49
CHD3-214ENST00000572579 ACOX1Q15067 660 aa18.14■□□□□ 0.49
CHD3-214ENST00000572579 FAM182AQ5T1J6 154 aa18.14■□□□□ 0.49
CHD3-214ENST00000572579 ESRP1Q6NXG1 681 aaKnown RBP18.14■□□□□ 0.49
CHD3-214ENST00000572579 ALKBH5Q6P6C2 394 aaKnown RBP18.14■□□□□ 0.49
CHD3-214ENST00000572579 IGF2-ASQ6U949 168 aa18.14■□□□□ 0.49
CHD3-214ENST00000572579 NRROSQ86YC3 692 aa18.14■□□□□ 0.49
CHD3-214ENST00000572579 LSMEM2Q8N112 164 aa18.14■□□□□ 0.49
CHD3-214ENST00000572579 ZNF248Q8NDW4 579 aa18.14■□□□□ 0.49
CHD3-214ENST00000572579 PIH1D2Q8WWB5 315 aa18.14■□□□□ 0.49
CHD3-214ENST00000572579 GLMNQ92990 594 aa18.14■□□□□ 0.49
CHD3-214ENST00000572579 FCRL3Q96P31 734 aaPredicted RBP18.14■□□□□ 0.49
CHD3-214ENST00000572579 PACSIN1Q9BY11 444 aa18.14■□□□□ 0.49
CHD3-214ENST00000572579 IFNKQ9P0W0 207 aa18.14■□□□□ 0.49
CHD3-214ENST00000572579 IP6K2Q9UHH9 426 aa18.14■□□□□ 0.49
CHD3-214ENST00000572579 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.13■□□□□ 0.49
CHD3-214ENST00000572579 CDRT15L2A8MXV6 281 aa18.13■□□□□ 0.49
CHD3-214ENST00000572579 FZD6O60353 706 aa18.13■□□□□ 0.49
CHD3-214ENST00000572579 SOCS5O75159 536 aa18.13■□□□□ 0.49
CHD3-214ENST00000572579 PGLSO95336 258 aa18.13■□□□□ 0.49
CHD3-214ENST00000572579 MAP3K6O95382 1288 aa18.13■□□□□ 0.49
CHD3-214ENST00000572579 CEACAM5P06731 702 aa18.13■□□□□ 0.49
CHD3-214ENST00000572579 CDH6P55285 790 aa18.13■□□□□ 0.49
CHD3-214ENST00000572579 PCBP4P57723 403 aaKnown RBP18.13■□□□□ 0.49
CHD3-214ENST00000572579 DPYSL3Q14195 570 aa18.13■□□□□ 0.49
CHD3-214ENST00000572579 ZNF235Q14590 738 aa18.13■□□□□ 0.49
CHD3-214ENST00000572579 ASTE1Q2TB18 679 aaPredicted RBP18.13■□□□□ 0.49
CHD3-214ENST00000572579 CCDC122Q5T0U0 273 aa18.13■□□□□ 0.49
CHD3-214ENST00000572579 Q6ZVL8 140 aa18.13■□□□□ 0.49
CHD3-214ENST00000572579 TMPRSS9Q7Z410 1059 aa18.13■□□□□ 0.49
CHD3-214ENST00000572579 TECPR1Q7Z6L1 1165 aa18.13■□□□□ 0.49
CHD3-214ENST00000572579 GKN2Q86XP6 184 aa18.13■□□□□ 0.49
CHD3-214ENST00000572579 SDR16C5Q8N3Y7 309 aa18.13■□□□□ 0.49
CHD3-214ENST00000572579 PDCD6IPQ8WUM4 868 aaKnown RBP18.13■□□□□ 0.49
CHD3-214ENST00000572579 MCCC1Q96RQ3 725 aaPredicted RBP18.13■□□□□ 0.49
CHD3-214ENST00000572579 FOXP3Q9BZS1 431 aa18.13■□□□□ 0.49
CHD3-214ENST00000572579 CPNE5Q9HCH3 593 aa18.13■□□□□ 0.49
CHD3-214ENST00000572579 SPATS2LQ9NUQ6 558 aaKnown RBP18.13■□□□□ 0.49
CHD3-214ENST00000572579 DOLKQ9UPQ8 538 aa18.13■□□□□ 0.49
CHD3-214ENST00000572579 PPIL1Q9Y3C6 166 aa18.13■□□□□ 0.49
CHD3-214ENST00000572579 PCDHGA8Q9Y5G5 932 aa18.13■□□□□ 0.49
CHD3-214ENST00000572579 CACNB4O00305 520 aaPredicted RBP18.12■□□□□ 0.49
CHD3-214ENST00000572579 TNFRSF10CO14798 259 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms