RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 BRD8Q9H0E9 1235 aa7.83□□□□□ -1.16
SMG6-211ENST00000572369 NOD2Q9HC29 1040 aa7.83□□□□□ -1.16
SMG6-211ENST00000572369 PCDH12Q9NPG4 1184 aa7.83□□□□□ -1.16
SMG6-211ENST00000572369 TM7SF3Q9NS93 570 aa7.83□□□□□ -1.16
SMG6-211ENST00000572369 SAE1Q9UBE0 346 aaPredicted RBP7.83□□□□□ -1.16
SMG6-211ENST00000572369 AMACRQ9UHK6 382 aa7.83□□□□□ -1.16
SMG6-211ENST00000572369 PACSIN2Q9UNF0 486 aaPredicted RBP7.83□□□□□ -1.16
SMG6-211ENST00000572369 CA5BQ9Y2D0 317 aa7.83□□□□□ -1.16
SMG6-211ENST00000572369 ATP8A1Q9Y2Q0 1164 aa7.83□□□□□ -1.16
SMG6-211ENST00000572369 COQ6Q9Y2Z9 468 aa7.83□□□□□ -1.16
SMG6-211ENST00000572369 SPAARA0A1B0GVQ0 90 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 TSPAN11A1L157 253 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 GOLGA8CPA6NN73 597 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 H0Y8X5 98 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 APOC4-APOC2K7ER74 178 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 RIOK3O14730 519 aaKnown RBP7.82□□□□□ -1.16
SMG6-211ENST00000572369 WNT9AO14904 365 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 AREL1O15033 823 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 MTSS1O43312 755 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 TJP3O95049 919 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 APOC2P02655 101 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 WNT1P04628 370 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 HLA-DQB2P05538 268 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 ELFN1P0C7U0 828 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 PECAM1P16284 738 aaPredicted RBP7.82□□□□□ -1.16
SMG6-211ENST00000572369 CD86P42081 329 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 TNNT3P45378 269 aaPredicted RBP7.82□□□□□ -1.16
SMG6-211ENST00000572369 ARRB1P49407 418 aaPredicted RBP7.82□□□□□ -1.16
SMG6-211ENST00000572369 LIG3P49916 1009 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 CCT8P50990 548 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 THOP1P52888 689 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 CLDN2P57739 230 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 SIM1P81133 766 aaPredicted RBP7.82□□□□□ -1.16
SMG6-211ENST00000572369 IL9RQ01113 521 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 OVGP1Q12889 678 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 SLC14A1Q13336 389 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 ACOX1Q15067 660 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 PPP2R5EQ16537 467 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 TMEM52BQ4KMG9 183 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 PRAMEF14Q5SWL7 426 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 SEL1L2Q5TEA6 688 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 USP45Q70EL2 814 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 RAB44Q7Z6P3 723 aaPredicted RBP7.82□□□□□ -1.16
SMG6-211ENST00000572369 IQCHQ86VS3 1027 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 ZSWIM9Q86XI8 627 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 OXR1Q8N573 874 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 TEX26Q8N6G2 289 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 LRRC57Q8N9N7 239 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 FAM174AQ8TBP5 190 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 MAML1Q92585 1016 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 FATE1Q969F0 183 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 AGAP3Q96P47 875 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 ORAI3Q9BRQ5 295 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 C1QTNF2Q9BXJ5 285 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 OSBPL8Q9BZF1 889 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 IL21RQ9HBE5 538 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 DNAAF2Q9NVR5 837 aaKnown RBP7.82□□□□□ -1.16
SMG6-211ENST00000572369 PHTF1Q9UMS5 762 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 CAPN6Q9Y6Q1 641 aa7.82□□□□□ -1.16
SMG6-211ENST00000572369 COL5A1P20908 1838 aaPredicted RBP7.81□□□□□ -1.16
SMG6-211ENST00000572369 A0A1W2PR77 199 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 GOLGA6CA6NDK9 693 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 GOLGA6BA6NDN3 693 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 HACD1B0YJ81 288 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 TRAFD1O14545 582 aaPredicted RBP7.81□□□□□ -1.16
SMG6-211ENST00000572369 YKT6O15498 198 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 HTRA2O43464 458 aaPredicted RBP7.81□□□□□ -1.16
SMG6-211ENST00000572369 STK10O94804 968 aaKnown RBP7.81□□□□□ -1.16
SMG6-211ENST00000572369 ITGAVP06756 1048 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 GOLGA6DP0CG33 693 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 PYGMP11217 842 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 C6P13671 934 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 CTPS1P17812 591 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 CR2P20023 1033 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 MMP12P39900 470 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 CTSKP43235 329 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 RABIFP47224 123 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 NXPH1P58417 271 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 IFI35P80217 286 aaPredicted RBP7.81□□□□□ -1.16
SMG6-211ENST00000572369 CCZ1BP86790 482 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 CCZ1P86791 482 aaPredicted RBP7.81□□□□□ -1.16
SMG6-211ENST00000572369 BNC1Q01954 994 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 TRAF2Q12933 501 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 ZBTB17Q13105 803 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 ZNF211Q13398 564 aaPredicted RBP7.81□□□□□ -1.16
SMG6-211ENST00000572369 PDE1CQ14123 709 aaPredicted RBP7.81□□□□□ -1.16
SMG6-211ENST00000572369 PTK2BQ14289 1009 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 LRRC14Q15048 493 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 PCSK7Q16549 785 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 TAZQ16635 292 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 INAVAQ3KP66 663 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 CCDC70Q6NSX1 233 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 AADACL2Q6P093 401 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 DARS2Q6PI48 645 aaKnown RBP7.81□□□□□ -1.16
SMG6-211ENST00000572369 GCNT7Q6ZNI0 430 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 Q6ZSR6 202 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 BBS12Q6ZW61 710 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 DPPA4Q7L190 304 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 PID1Q7Z2X4 250 aa7.81□□□□□ -1.16
SMG6-211ENST00000572369 KDELC2Q7Z4H8 507 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms