RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 PRRT3Q5FWE3 981 aa14.93□□□□□ -0.02
NPLOC4-207ENST00000572346 ARHGAP40Q5TG30 622 aa14.93□□□□□ -0.02
NPLOC4-207ENST00000572346 LRRC38Q5VT99 294 aa14.93□□□□□ -0.02
NPLOC4-207ENST00000572346 GDPD4Q6W3E5 623 aa14.93□□□□□ -0.02
NPLOC4-207ENST00000572346 TTC7BQ86TV6 843 aa14.93□□□□□ -0.02
NPLOC4-207ENST00000572346 SLC35F3Q8IY50 421 aa14.93□□□□□ -0.02
NPLOC4-207ENST00000572346 PHACTR4Q8IZ21 702 aa14.93□□□□□ -0.02
NPLOC4-207ENST00000572346 TRIM44Q96DX7 344 aaPredicted RBP14.93□□□□□ -0.02
NPLOC4-207ENST00000572346 SLC46A1Q96NT5 459 aa14.93□□□□□ -0.02
NPLOC4-207ENST00000572346 LRRC61Q9BV99 259 aa14.93□□□□□ -0.02
NPLOC4-207ENST00000572346 DPH1Q9BZG8 443 aa14.93□□□□□ -0.02
NPLOC4-207ENST00000572346 PCDH18Q9HCL0 1135 aa14.93□□□□□ -0.02
NPLOC4-207ENST00000572346 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.93□□□□□ -0.02
NPLOC4-207ENST00000572346 CAPN6Q9Y6Q1 641 aa14.93□□□□□ -0.02
NPLOC4-207ENST00000572346 ZNF462Q96JM2 2506 aa14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 ZSCAN5CA6NGD5 496 aaPredicted RBP14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 LMO7DNF2Z398 122 aa14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 CASC3O15234 703 aaKnown RBP14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 MMP20O60882 483 aa14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 TCEA3O75764 348 aa14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 TM7SF2O76062 418 aa14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 TMCC1O94876 653 aa14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 PLA2G2AP14555 144 aa14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 ITIH2P19823 946 aa14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 KDELR1P24390 212 aa14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 RBMS1P29558 406 aaKnown RBP14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 YPEL5P62699 121 aa14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 RHDQ02161 417 aa14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 TAF1BQ53T94 588 aaPredicted RBP14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 C6orf132Q5T0Z8 1188 aa14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 RBM44Q6ZP01 1051 aaKnown RBP14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 RFX8Q6ZV50 586 aa14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 ZNF605Q86T29 641 aa14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 NETO2Q8NC67 525 aa14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 PRR11Q96HE9 360 aaPredicted RBP14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 TBATAQ96M53 351 aa14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 GDAP1L1Q96MZ0 367 aa14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 CLPBQ9H078 707 aa14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 NOL6Q9H6R4 1146 aaKnown RBP14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 MBNL1Q9NR56 388 aaKnown RBP14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 CWC15Q9P013 229 aaKnown RBP14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 PYCARDQ9ULZ3 195 aa14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 SSUH2Q9Y2M2 353 aa14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 PCDHGA8Q9Y5G5 932 aa14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 LRRK1Q38SD2 2015 aa14.92□□□□□ -0.02
NPLOC4-207ENST00000572346 ATMQ13315 3056 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 COL6A6A6NMZ7 2263 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 CCDC66A2RUB6 948 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 PMS2P1A4D2B8 440 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 GOLGA6L9A6NEM1 432 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 TOR1BO14657 336 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 YY2O15391 372 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 FTCDO95954 541 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 ANXA6P08133 673 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 TSHRP16473 764 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 ERCC2P18074 760 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 AMPD1P23109 780 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 HCAR3P49019 387 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 RPIAP49247 311 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 SKOR1P84550 965 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 RAD51Q06609 339 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 FAXCQ5TGI0 409 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 MACC1Q6ZN28 852 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 ZNF354CQ86Y25 554 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 CCDC50Q8IVM0 306 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 UBL4BQ8N7F7 174 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 RTL3Q8N8U3 475 aaKnown RBP14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 LRRC57Q8N9N7 239 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 TP53I13Q8NBR0 393 aaPredicted RBP14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 CXorf40AQ8TE69 158 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 SNRNP27Q8WVK2 155 aaKnown RBP14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 GLMNQ92990 594 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 NAT6Q93015 286 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 RNF25Q96BH1 459 aaPredicted RBP14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 WBP1Q96G27 269 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 C1QTNF7Q9BXJ2 289 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 MAK16Q9BXY0 300 aaKnown RBP14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 SLC13A1Q9BZW2 595 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 KLC2Q9H0B6 622 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 RCOR3Q9P2K3 495 aaPredicted RBP14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 MFHAS1Q9Y4C4 1052 aa14.91□□□□□ -0.02
NPLOC4-207ENST00000572346 SETXQ7Z333 2677 aaKnown RBP14.9□□□□□ -0.02
NPLOC4-207ENST00000572346 CDRT15L2A8MXV6 281 aa14.9□□□□□ -0.02
NPLOC4-207ENST00000572346 MIF4GDA9UHW6 222 aaKnown RBP14.9□□□□□ -0.02
NPLOC4-207ENST00000572346 ZRANB2O95218 330 aaKnown RBP eCLIP14.9□□□□□ -0.02
NPLOC4-207ENST00000572346 IGSF6O95976 241 aa14.9□□□□□ -0.02
NPLOC4-207ENST00000572346 CELA2BP08218 269 aaPredicted RBP14.9□□□□□ -0.02
NPLOC4-207ENST00000572346 CD48P09326 243 aa14.9□□□□□ -0.02
NPLOC4-207ENST00000572346 TIMP2P16035 220 aa14.9□□□□□ -0.02
NPLOC4-207ENST00000572346 MSNP26038 577 aaKnown RBP14.9□□□□□ -0.02
NPLOC4-207ENST00000572346 CETN2P41208 172 aa14.9□□□□□ -0.02
NPLOC4-207ENST00000572346 PDX1P52945 283 aa14.9□□□□□ -0.02
NPLOC4-207ENST00000572346 RHOAP61586 193 aa14.9□□□□□ -0.02
NPLOC4-207ENST00000572346 PPARDQ03181 441 aa14.9□□□□□ -0.02
NPLOC4-207ENST00000572346 VAC14Q08AM6 782 aa14.9□□□□□ -0.02
NPLOC4-207ENST00000572346 MMRN1Q13201 1228 aa14.9□□□□□ -0.02
NPLOC4-207ENST00000572346 DPYSL3Q14195 570 aa14.9□□□□□ -0.02
NPLOC4-207ENST00000572346 INO80DQ53TQ3 878 aaPredicted RBP14.9□□□□□ -0.02
NPLOC4-207ENST00000572346 NT5DC3Q86UY8 548 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms