RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 NTAN1Q96AB6 310 aa19.92■□□□□ 0.78
CCDC40-206ENST00000572083 ZNF641Q96N77 438 aaPredicted RBP19.92■□□□□ 0.78
CCDC40-206ENST00000572083 WDR26Q9H7D7 661 aa19.92■□□□□ 0.78
CCDC40-206ENST00000572083 B3GALT1Q9Y5Z6 326 aa19.92■□□□□ 0.78
CCDC40-206ENST00000572083 NBASA2RRP1 2371 aa19.92■□□□□ 0.78
CCDC40-206ENST00000572083 F8VZ95 297 aa19.91■□□□□ 0.78
CCDC40-206ENST00000572083 TNFRSF10CO14798 259 aa19.91■□□□□ 0.78
CCDC40-206ENST00000572083 TEX33O43247 280 aa19.91■□□□□ 0.78
CCDC40-206ENST00000572083 CREB3O43889 395 aa19.91■□□□□ 0.78
CCDC40-206ENST00000572083 GADD45BO75293 160 aaPredicted RBP19.91■□□□□ 0.78
CCDC40-206ENST00000572083 CCNB1P14635 433 aa19.91■□□□□ 0.78
CCDC40-206ENST00000572083 MMP8P22894 467 aa19.91■□□□□ 0.78
CCDC40-206ENST00000572083 CASRP41180 1078 aa19.91■□□□□ 0.78
CCDC40-206ENST00000572083 CCR10P46092 362 aa19.91■□□□□ 0.78
CCDC40-206ENST00000572083 RGRP47804 291 aa19.91■□□□□ 0.78
CCDC40-206ENST00000572083 YBEYP58557 167 aaPredicted RBP19.91■□□□□ 0.78
CCDC40-206ENST00000572083 TPD52L1Q16890 204 aaPredicted RBP19.91■□□□□ 0.78
CCDC40-206ENST00000572083 VWA3BQ502W6 1294 aa19.91■□□□□ 0.78
CCDC40-206ENST00000572083 HSP90AA4PQ58FG1 418 aa19.91■□□□□ 0.78
CCDC40-206ENST00000572083 MIIPQ5JXC2 388 aa19.91■□□□□ 0.78
CCDC40-206ENST00000572083 LIPIQ6XZB0 460 aa19.91■□□□□ 0.78
CCDC40-206ENST00000572083 ZNF438Q7Z4V0 828 aa19.91■□□□□ 0.78
CCDC40-206ENST00000572083 SLFN11Q7Z7L1 901 aa19.91■□□□□ 0.78
CCDC40-206ENST00000572083 CACNA2D3Q8IZS8 1091 aa19.91■□□□□ 0.78
CCDC40-206ENST00000572083 ZDHHC1Q8WTX9 485 aa19.91■□□□□ 0.78
CCDC40-206ENST00000572083 PATE1Q8WXA2 126 aa19.91■□□□□ 0.78
CCDC40-206ENST00000572083 NAA15Q9BXJ9 866 aaKnown RBP19.91■□□□□ 0.78
CCDC40-206ENST00000572083 CARS2Q9HA77 564 aaKnown RBP19.91■□□□□ 0.78
CCDC40-206ENST00000572083 ZNF71Q9NQZ8 489 aaPredicted RBP19.91■□□□□ 0.78
CCDC40-206ENST00000572083 TUBD1Q9UJT1 453 aa19.91■□□□□ 0.78
CCDC40-206ENST00000572083 PCDHGA3Q9Y5H0 932 aa19.91■□□□□ 0.78
CCDC40-206ENST00000572083 USP9YO00507 2555 aaPredicted RBP19.9■□□□□ 0.78
CCDC40-206ENST00000572083 A8MX80 341 aa19.9■□□□□ 0.78
CCDC40-206ENST00000572083 J3KR12 359 aa19.9■□□□□ 0.78
CCDC40-206ENST00000572083 ECEL1O95672 775 aa19.9■□□□□ 0.78
CCDC40-206ENST00000572083 UCHL3P15374 230 aa19.9■□□□□ 0.78
CCDC40-206ENST00000572083 GM2AP17900 193 aa19.9■□□□□ 0.78
CCDC40-206ENST00000572083 MPSTP25325 297 aa19.9■□□□□ 0.78
CCDC40-206ENST00000572083 CD1CP29017 333 aa19.9■□□□□ 0.78
CCDC40-206ENST00000572083 TRIM23P36406 574 aa19.9■□□□□ 0.78
CCDC40-206ENST00000572083 NR1D2Q14995 579 aa19.9■□□□□ 0.78
CCDC40-206ENST00000572083 NKAIN2Q5VXU1 208 aa19.9■□□□□ 0.78
CCDC40-206ENST00000572083 NRROSQ86YC3 692 aa19.9■□□□□ 0.78
CCDC40-206ENST00000572083 GPBAR1Q8TDU6 330 aa19.9■□□□□ 0.78
CCDC40-206ENST00000572083 PDFQ9HBH1 243 aa19.9■□□□□ 0.78
CCDC40-206ENST00000572083 MAN2B2Q9Y2E5 1009 aa19.9■□□□□ 0.78
CCDC40-206ENST00000572083 CLEC18AA5D8T8 446 aa19.89■□□□□ 0.77
CCDC40-206ENST00000572083 PES1O00541 588 aaKnown RBP19.89■□□□□ 0.77
CCDC40-206ENST00000572083 FGF1P05230 155 aa19.89■□□□□ 0.77
CCDC40-206ENST00000572083 HOXC4P09017 264 aaPredicted RBP19.89■□□□□ 0.77
CCDC40-206ENST00000572083 AK4P27144 223 aaPredicted RBP19.89■□□□□ 0.77
CCDC40-206ENST00000572083 SERPINA4P29622 427 aa19.89■□□□□ 0.77
CCDC40-206ENST00000572083 STAT1P42224 750 aa19.89■□□□□ 0.77
CCDC40-206ENST00000572083 LIMK2P53671 638 aa19.89■□□□□ 0.77
CCDC40-206ENST00000572083 BIRC2Q13490 618 aa19.89■□□□□ 0.77
CCDC40-206ENST00000572083 TSR1Q2NL82 804 aaKnown RBP19.89■□□□□ 0.77
CCDC40-206ENST00000572083 CLEC18BQ6UXF7 455 aa19.89■□□□□ 0.77
CCDC40-206ENST00000572083 C17orf82Q86X59 251 aaPredicted RBP19.89■□□□□ 0.77
CCDC40-206ENST00000572083 PAF1Q8N7H5 531 aa19.89■□□□□ 0.77
CCDC40-206ENST00000572083 CLEC18CQ8NCF0 446 aa19.89■□□□□ 0.77
CCDC40-206ENST00000572083 CCDC112Q8NEF3 446 aa19.89■□□□□ 0.77
CCDC40-206ENST00000572083 C9orf43Q8TAL5 461 aaPredicted RBP19.89■□□□□ 0.77
CCDC40-206ENST00000572083 TUBGCP5Q96RT8 1024 aa19.89■□□□□ 0.77
CCDC40-206ENST00000572083 CDH19Q9H159 772 aa19.89■□□□□ 0.77
CCDC40-206ENST00000572083 ATP13A3Q9H7F0 1226 aa19.89■□□□□ 0.77
CCDC40-206ENST00000572083 TMEM9Q9P0T7 183 aa19.89■□□□□ 0.77
CCDC40-206ENST00000572083 TAAR2Q9P1P5 351 aa19.89■□□□□ 0.77
CCDC40-206ENST00000572083 ANAPC2Q9UJX6 822 aa19.89■□□□□ 0.77
CCDC40-206ENST00000572083 NOCTQ9UK39 431 aaKnown RBP19.89■□□□□ 0.77
CCDC40-206ENST00000572083 CFAP69A5D8W1 941 aa19.88■□□□□ 0.77
CCDC40-206ENST00000572083 ZNF891A8MT65 544 aaPredicted RBP19.88■□□□□ 0.77
CCDC40-206ENST00000572083 DUX1O43812 170 aa19.88■□□□□ 0.77
CCDC40-206ENST00000572083 RAD1O60671 282 aa19.88■□□□□ 0.77
CCDC40-206ENST00000572083 CYP1A1P04798 512 aaPredicted RBP19.88■□□□□ 0.77
CCDC40-206ENST00000572083 PRKAR1AP10644 381 aa19.88■□□□□ 0.77
CCDC40-206ENST00000572083 CSF2RBP32927 897 aa19.88■□□□□ 0.77
CCDC40-206ENST00000572083 RFC1P35251 1148 aaPredicted RBP19.88■□□□□ 0.77
CCDC40-206ENST00000572083 FMO1Q01740 532 aa19.88■□□□□ 0.77
CCDC40-206ENST00000572083 ILF3Q12906 894 aaKnown RBP eCLIP19.88■□□□□ 0.77
CCDC40-206ENST00000572083 ACOX1Q15067 660 aa19.88■□□□□ 0.77
CCDC40-206ENST00000572083 CAMK4Q16566 473 aa19.88■□□□□ 0.77
CCDC40-206ENST00000572083 PNCKQ6P2M8 343 aa19.88■□□□□ 0.77
CCDC40-206ENST00000572083 SCYL2Q6P3W7 929 aa19.88■□□□□ 0.77
CCDC40-206ENST00000572083 SLC30A9Q6PML9 568 aa19.88■□□□□ 0.77
CCDC40-206ENST00000572083 SRLQ86TD4 932 aa19.88■□□□□ 0.77
CCDC40-206ENST00000572083 FAM129CQ86XR2 697 aa19.88■□□□□ 0.77
CCDC40-206ENST00000572083 UMODL1-AS1Q8N2C9 162 aa19.88■□□□□ 0.77
CCDC40-206ENST00000572083 TSEN2Q8NCE0 465 aaKnown RBP19.88■□□□□ 0.77
CCDC40-206ENST00000572083 AGBL5Q8NDL9 886 aa19.88■□□□□ 0.77
CCDC40-206ENST00000572083 CELF6Q96J87 481 aaKnown RBP19.88■□□□□ 0.77
CCDC40-206ENST00000572083 TUBGCP2Q9BSJ2 902 aa19.88■□□□□ 0.77
CCDC40-206ENST00000572083 DDA1Q9BW61 102 aa19.88■□□□□ 0.77
CCDC40-206ENST00000572083 GSDMCQ9BYG8 508 aa19.88■□□□□ 0.77
CCDC40-206ENST00000572083 ZMYND15Q9H091 742 aa19.88■□□□□ 0.77
CCDC40-206ENST00000572083 CATSPERBQ9H7T0 1116 aa19.88■□□□□ 0.77
CCDC40-206ENST00000572083 KIAA1468Q9P260 1216 aa19.88■□□□□ 0.77
CCDC40-206ENST00000572083 NKX2-8O15522 239 aa19.87■□□□□ 0.77
CCDC40-206ENST00000572083 GFPT2O94808 682 aa19.87■□□□□ 0.77
CCDC40-206ENST00000572083 FUCA1P04066 466 aa19.87■□□□□ 0.77
CCDC40-206ENST00000572083 KRT3P12035 628 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms