RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 MPP6Q9NZW5 540 aa17.51■□□□□ 0.39
SCARF1-205ENST00000571272 TDRKHQ9Y2W6 561 aaKnown RBP17.51■□□□□ 0.39
SCARF1-205ENST00000571272 SMIM35A0A1B0GVV1 85 aa17.51■□□□□ 0.39
SCARF1-205ENST00000571272 FAM155AB1AL88 458 aaPredicted RBP17.51■□□□□ 0.39
SCARF1-205ENST00000571272 MSI1O43347 362 aaKnown RBP17.51■□□□□ 0.39
SCARF1-205ENST00000571272 SLC4A1P02730 911 aa17.51■□□□□ 0.39
SCARF1-205ENST00000571272 IMPDH1P20839 514 aa17.51■□□□□ 0.39
SCARF1-205ENST00000571272 GPX3P22352 226 aa17.51■□□□□ 0.39
SCARF1-205ENST00000571272 AXLP30530 894 aa17.51■□□□□ 0.39
SCARF1-205ENST00000571272 CLCNKBP51801 687 aa17.51■□□□□ 0.39
SCARF1-205ENST00000571272 MAXP61244 160 aa17.51■□□□□ 0.39
SCARF1-205ENST00000571272 PCYOX1LQ8NBM8 494 aa17.51■□□□□ 0.39
SCARF1-205ENST00000571272 ISOC1Q96CN7 298 aa17.51■□□□□ 0.39
SCARF1-205ENST00000571272 CRYL1Q9Y2S2 319 aa17.51■□□□□ 0.39
SCARF1-205ENST00000571272 VWA7Q9Y334 891 aa17.51■□□□□ 0.39
SCARF1-205ENST00000571272 TRIP12Q14669 1992 aaPredicted RBP17.51■□□□□ 0.39
SCARF1-205ENST00000571272 DHRS12A0PJE2 317 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 OR51F1A6NGY5 319 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 LRRC14BA6NHZ5 514 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 BMP10O95393 424 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 MOCS2O96007 188 aaPredicted RBP17.5■□□□□ 0.39
SCARF1-205ENST00000571272 BDNFP23560 247 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 CDKN2DP55273 166 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 ESRRGP62508 458 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 CDC42EP1Q00587 391 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 C16orf72Q14CZ0 275 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 ACAP2Q15057 778 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 C3orf58Q8NDZ4 430 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 SCAMP5Q8TAC9 235 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 MIPOL1Q8TD10 442 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 PTCD2Q8WV60 388 aaKnown RBP17.5■□□□□ 0.39
SCARF1-205ENST00000571272 CYGBQ8WWM9 190 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 C12orf43Q96C57 262 aaKnown RBP17.5■□□□□ 0.39
SCARF1-205ENST00000571272 UBXN10Q96LJ8 280 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 ADI1Q9BV57 179 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 MUC3BQ9H195 1237 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 CCM2LQ9NUG4 571 aaPredicted RBP17.5■□□□□ 0.39
SCARF1-205ENST00000571272 MRGBPQ9NV56 204 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 ARMC1Q9NVT9 282 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 TTC24A2A3L6 582 aaPredicted RBP17.5■□□□□ 0.39
SCARF1-205ENST00000571272 PAGE1O75459 146 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 SIX3O95343 332 aaPredicted RBP17.5■□□□□ 0.39
SCARF1-205ENST00000571272 HNRNPCP07910 306 aaKnown RBP eCLIP17.5■□□□□ 0.39
SCARF1-205ENST00000571272 OXTRP30559 389 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 SH3BP2P78314 561 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 ITKQ08881 620 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 ZNF678Q5SXM1 525 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 IFNEQ86WN2 208 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 SLC22A9Q8IVM8 553 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 MAML3Q96JK9 1138 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 PPP1R10Q96QC0 940 aaKnown RBP17.5■□□□□ 0.39
SCARF1-205ENST00000571272 A0A087WXM4 84 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 CAPN3P20807 821 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 ZNF135P52742 658 aaPredicted RBP17.5■□□□□ 0.39
SCARF1-205ENST00000571272 FOXA1P55317 472 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 GRB7Q14451 532 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 PAN2Q504Q3 1202 aaKnown RBP17.5■□□□□ 0.39
SCARF1-205ENST00000571272 UNC50Q53HI1 259 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 ISCA2Q86U28 154 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 CAMK1DQ8IU85 385 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 SLC15A3Q8IY34 581 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 SMARCD1Q96GM5 515 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 FBXL20Q96IG2 436 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 MRM3Q9HC36 420 aaKnown RBP17.5■□□□□ 0.39
SCARF1-205ENST00000571272 DNAJC15Q9Y5T4 150 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 CEP350Q5VT06 3117 aa17.5■□□□□ 0.39
SCARF1-205ENST00000571272 LEPRP48357 1165 aaKnown RBP17.49■□□□□ 0.39
SCARF1-205ENST00000571272 LHX1P48742 406 aa17.49■□□□□ 0.39
SCARF1-205ENST00000571272 CLCN5P51795 746 aa17.49■□□□□ 0.39
SCARF1-205ENST00000571272 ZNF33AQ06730 810 aa17.49■□□□□ 0.39
SCARF1-205ENST00000571272 MERTKQ12866 999 aa17.49■□□□□ 0.39
SCARF1-205ENST00000571272 PRAMEF19Q5SWL8 479 aa17.49■□□□□ 0.39
SCARF1-205ENST00000571272 HACD2Q6Y1H2 254 aa17.49■□□□□ 0.39
SCARF1-205ENST00000571272 KIAA0408Q6ZU52 694 aa17.49■□□□□ 0.39
SCARF1-205ENST00000571272 DDIASQ8IXT1 998 aa17.49■□□□□ 0.39
SCARF1-205ENST00000571272 OFCC1Q8IZS5 231 aa17.49■□□□□ 0.39
SCARF1-205ENST00000571272 FNDC8Q8TC99 324 aa17.49■□□□□ 0.39
SCARF1-205ENST00000571272 LZICQ8WZA0 190 aa17.49■□□□□ 0.39
SCARF1-205ENST00000571272 MYLPFQ96A32 169 aa17.49■□□□□ 0.39
SCARF1-205ENST00000571272 CDCA5Q96FF9 252 aa17.49■□□□□ 0.39
SCARF1-205ENST00000571272 FCRL2Q96LA5 508 aaPredicted RBP17.49■□□□□ 0.39
SCARF1-205ENST00000571272 KCNA7Q96RP8 456 aa17.49■□□□□ 0.39
SCARF1-205ENST00000571272 GAD1Q99259 594 aa17.49■□□□□ 0.39
SCARF1-205ENST00000571272 PAAF1Q9BRP4 392 aa17.49■□□□□ 0.39
SCARF1-205ENST00000571272 OAZ3Q9UMX2 235 aa17.49■□□□□ 0.39
SCARF1-205ENST00000571272 BRCA1P38398 1863 aaKnown RBP17.49■□□□□ 0.39
SCARF1-205ENST00000571272 ACADVLP49748 655 aa17.49■□□□□ 0.39
SCARF1-205ENST00000571272 CMTR2Q8IYT2 770 aaKnown RBP17.49■□□□□ 0.39
SCARF1-205ENST00000571272 PTERQ96BW5 349 aa17.49■□□□□ 0.39
SCARF1-205ENST00000571272 ROPN1LQ96C74 230 aa17.49■□□□□ 0.39
SCARF1-205ENST00000571272 BIRC8Q96P09 236 aa17.49■□□□□ 0.39
SCARF1-205ENST00000571272 PRKD2Q9BZL6 878 aa17.49■□□□□ 0.39
SCARF1-205ENST00000571272 MARCH4Q9P2E8 410 aaPredicted RBP17.49■□□□□ 0.39
SCARF1-205ENST00000571272 ANGPT2O15123 496 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 IL10P22301 178 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 ARSDP51689 593 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 PCBP1Q15365 356 aaKnown RBP eCLIP17.48■□□□□ 0.39
SCARF1-205ENST00000571272 UGT3A2Q3SY77 523 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 GPR180Q86V85 440 aa17.48■□□□□ 0.39
SCARF1-205ENST00000571272 OR13J1Q8NGT2 312 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms