RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 AHCTF1Q8WYP5 2266 aa21.15■□□□□ 0.98
PKD1-240ENST00000570253 PRAMEF33A0A0G2JMD5 474 aa21.14■□□□□ 0.97
PKD1-240ENST00000570253 A0A1W2PQ67 120 aa21.14■□□□□ 0.97
PKD1-240ENST00000570253 A0A1W2PQC6 194 aa21.14■□□□□ 0.97
PKD1-240ENST00000570253 TMEM202A6NGA9 273 aa21.14■□□□□ 0.97
PKD1-240ENST00000570253 RHPN2P1A8MT19 583 aa21.14■□□□□ 0.97
PKD1-240ENST00000570253 BUB1BO60566 1050 aaPredicted RBP21.14■□□□□ 0.97
PKD1-240ENST00000570253 PRAMEF10O60809 474 aa21.14■□□□□ 0.97
PKD1-240ENST00000570253 ITIH1P19827 911 aa21.14■□□□□ 0.97
PKD1-240ENST00000570253 RPL7AP62424 266 aaKnown RBP21.14■□□□□ 0.97
PKD1-240ENST00000570253 ZFP36L1Q07352 338 aaKnown RBP21.14■□□□□ 0.97
PKD1-240ENST00000570253 ILF3Q12906 894 aaKnown RBP eCLIP21.14■□□□□ 0.97
PKD1-240ENST00000570253 HLTFQ14527 1009 aaKnown RBP eCLIP21.14■□□□□ 0.97
PKD1-240ENST00000570253 CDKAL1Q5VV42 579 aa21.14■□□□□ 0.97
PKD1-240ENST00000570253 LIPIQ6XZB0 460 aa21.14■□□□□ 0.97
PKD1-240ENST00000570253 DPPA4Q7L190 304 aa21.14■□□□□ 0.97
PKD1-240ENST00000570253 TSEN2Q8NCE0 465 aaKnown RBP21.14■□□□□ 0.97
PKD1-240ENST00000570253 GSDMCQ9BYG8 508 aa21.14■□□□□ 0.97
PKD1-240ENST00000570253 TMEM168Q9H0V1 697 aa21.14■□□□□ 0.97
PKD1-240ENST00000570253 PHPT1Q9NRX4 125 aaPredicted RBP21.14■□□□□ 0.97
PKD1-240ENST00000570253 MYO18BQ8IUG5 2567 aa21.14■□□□□ 0.97
PKD1-240ENST00000570253 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.13■□□□□ 0.97
PKD1-240ENST00000570253 PRSS38A1L453 326 aa21.13■□□□□ 0.97
PKD1-240ENST00000570253 AGRPO00253 132 aa21.13■□□□□ 0.97
PKD1-240ENST00000570253 DFFAO00273 331 aa21.13■□□□□ 0.97
PKD1-240ENST00000570253 EPHB6O15197 1021 aa21.13■□□□□ 0.97
PKD1-240ENST00000570253 TEX33O43247 280 aa21.13■□□□□ 0.97
PKD1-240ENST00000570253 NOBOXO60393 691 aa21.13■□□□□ 0.97
PKD1-240ENST00000570253 RNF8O76064 485 aa21.13■□□□□ 0.97
PKD1-240ENST00000570253 CPNE6O95741 557 aa21.13■□□□□ 0.97
PKD1-240ENST00000570253 PSMA2P25787 234 aa21.13■□□□□ 0.97
PKD1-240ENST00000570253 CSRP3P50461 194 aa21.13■□□□□ 0.97
PKD1-240ENST00000570253 SCNN1BP51168 640 aa21.13■□□□□ 0.97
PKD1-240ENST00000570253 AP1S1P61966 158 aa21.13■□□□□ 0.97
PKD1-240ENST00000570253 NSUN2Q08J23 767 aaKnown RBP eCLIP21.13■□□□□ 0.97
PKD1-240ENST00000570253 CLPPQ16740 277 aaPredicted RBP21.13■□□□□ 0.97
PKD1-240ENST00000570253 CCDC112Q8NEF3 446 aa21.13■□□□□ 0.97
PKD1-240ENST00000570253 EXTL1Q92935 676 aa21.13■□□□□ 0.97
PKD1-240ENST00000570253 USP7Q93009 1102 aa21.13■□□□□ 0.97
PKD1-240ENST00000570253 B3GNT4Q9C0J1 378 aa21.13■□□□□ 0.97
PKD1-240ENST00000570253 SLC39A8Q9C0K1 460 aa21.13■□□□□ 0.97
PKD1-240ENST00000570253 MRPL40Q9NQ50 206 aaKnown RBP21.13■□□□□ 0.97
PKD1-240ENST00000570253 SIK3Q9Y2K2 1263 aa21.13■□□□□ 0.97
PKD1-240ENST00000570253 SCN8AQ9UQD0 1980 aa21.12■□□□□ 0.97
PKD1-240ENST00000570253 PYCARD-AS1I3L0S3 204 aa21.12■□□□□ 0.97
PKD1-240ENST00000570253 MYCLP1P12525 358 aaPredicted RBP21.12■□□□□ 0.97
PKD1-240ENST00000570253 FERP16591 822 aa21.12■□□□□ 0.97
PKD1-240ENST00000570253 TRIM23P36406 574 aa21.12■□□□□ 0.97
PKD1-240ENST00000570253 ATP1A2P50993 1020 aa21.12■□□□□ 0.97
PKD1-240ENST00000570253 ZNF135P52742 658 aaPredicted RBP21.12■□□□□ 0.97
PKD1-240ENST00000570253 COPB1P53618 953 aaKnown RBP21.12■□□□□ 0.97
PKD1-240ENST00000570253 UBXN1Q04323 297 aa21.12■□□□□ 0.97
PKD1-240ENST00000570253 IL10RBQ08334 325 aa21.12■□□□□ 0.97
PKD1-240ENST00000570253 RALGDSQ12967 914 aa21.12■□□□□ 0.97
PKD1-240ENST00000570253 AMZ1Q400G9 498 aa21.12■□□□□ 0.97
PKD1-240ENST00000570253 ERMARDQ5T6L9 678 aa21.12■□□□□ 0.97
PKD1-240ENST00000570253 AFMIDQ63HM1 303 aa21.12■□□□□ 0.97
PKD1-240ENST00000570253 ACAD10Q6JQN1 1059 aa21.12■□□□□ 0.97
PKD1-240ENST00000570253 PNCKQ6P2M8 343 aa21.12■□□□□ 0.97
PKD1-240ENST00000570253 ATG14Q6ZNE5 492 aa21.12■□□□□ 0.97
PKD1-240ENST00000570253 ZSWIM9Q86XI8 627 aa21.12■□□□□ 0.97
PKD1-240ENST00000570253 BBS5Q8N3I7 341 aa21.12■□□□□ 0.97
PKD1-240ENST00000570253 EXD3Q8N9H8 876 aa21.12■□□□□ 0.97
PKD1-240ENST00000570253 ECHDC3Q96DC8 303 aa21.12■□□□□ 0.97
PKD1-240ENST00000570253 NUS1Q96E22 293 aa21.12■□□□□ 0.97
PKD1-240ENST00000570253 CARS2Q9HA77 564 aaKnown RBP21.12■□□□□ 0.97
PKD1-240ENST00000570253 PARVAQ9NVD7 372 aa21.12■□□□□ 0.97
PKD1-240ENST00000570253 SEPT3Q9UH03 358 aa21.12■□□□□ 0.97
PKD1-240ENST00000570253 ARHGAP6O43182 974 aa21.11■□□□□ 0.97
PKD1-240ENST00000570253 CCNB1P14635 433 aa21.11■□□□□ 0.97
PKD1-240ENST00000570253 CDK11BP21127 795 aaKnown RBP21.11■□□□□ 0.97
PKD1-240ENST00000570253 ZNF235Q14590 738 aa21.11■□□□□ 0.97
PKD1-240ENST00000570253 TMCO4Q5TGY1 634 aa21.11■□□□□ 0.97
PKD1-240ENST00000570253 RFX8Q6ZV50 586 aa21.11■□□□□ 0.97
PKD1-240ENST00000570253 ZFAND4Q86XD8 727 aa21.11■□□□□ 0.97
PKD1-240ENST00000570253 SLITRK4Q8IW52 837 aa21.11■□□□□ 0.97
PKD1-240ENST00000570253 MCOLN2Q8IZK6 566 aa21.11■□□□□ 0.97
PKD1-240ENST00000570253 ZDHHC1Q8WTX9 485 aa21.11■□□□□ 0.97
PKD1-240ENST00000570253 ZMYND15Q9H091 742 aa21.11■□□□□ 0.97
PKD1-240ENST00000570253 SUDS3Q9H7L9 328 aaPredicted RBP21.11■□□□□ 0.97
PKD1-240ENST00000570253 GPATCH2LQ9NWQ4 482 aa21.11■□□□□ 0.97
PKD1-240ENST00000570253 PCDHGA4Q9Y5G9 962 aa21.11■□□□□ 0.97
PKD1-240ENST00000570253 TCRBV5S1A1TA0A578 114 aa21.1■□□□□ 0.97
PKD1-240ENST00000570253 LGALS16A8MUM7 142 aa21.1■□□□□ 0.97
PKD1-240ENST00000570253 STMND1H3BQB6 276 aa21.1■□□□□ 0.97
PKD1-240ENST00000570253 HGSO14964 777 aaPredicted RBP21.1■□□□□ 0.97
PKD1-240ENST00000570253 PRPSAP2O60256 369 aa21.1■□□□□ 0.97
PKD1-240ENST00000570253 PPFIA2O75334 1257 aa21.1■□□□□ 0.97
PKD1-240ENST00000570253 CYP2A6P11509 494 aaPredicted RBP21.1■□□□□ 0.97
PKD1-240ENST00000570253 KRT10P13645 584 aa21.1■□□□□ 0.97
PKD1-240ENST00000570253 TNFAIP3P21580 790 aa21.1■□□□□ 0.97
PKD1-240ENST00000570253 ALDH4A1P30038 563 aa21.1■□□□□ 0.97
PKD1-240ENST00000570253 HSPA9P38646 679 aaKnown RBP21.1■□□□□ 0.97
PKD1-240ENST00000570253 RGRP47804 291 aa21.1■□□□□ 0.97
PKD1-240ENST00000570253 LINC00303Q3SY05 128 aa21.1■□□□□ 0.97
PKD1-240ENST00000570253 PPP6R3Q5H9R7 873 aaPredicted RBP21.1■□□□□ 0.97
PKD1-240ENST00000570253 PPP1R15BQ5SWA1 713 aa21.1■□□□□ 0.97
PKD1-240ENST00000570253 VASH2Q86V25 355 aa21.1■□□□□ 0.97
PKD1-240ENST00000570253 LZTR1Q8N653 840 aa21.1■□□□□ 0.97
PKD1-240ENST00000570253 PDCD6IPQ8WUM4 868 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms