RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-223ENST00000568566 CCNYQ8ND76 341 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 ARRDC2Q8TBH0 407 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.44□□□□□ -1.06
TSC2-223ENST00000568566 KCNE4Q8WWG9 221 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 MAML1Q92585 1016 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 TRIM44Q96DX7 344 aaPredicted RBP8.44□□□□□ -1.06
TSC2-223ENST00000568566 HIC2Q96JB3 615 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 GORASP1Q9BQQ3 440 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 MAK16Q9BXY0 300 aaKnown RBP8.44□□□□□ -1.06
TSC2-223ENST00000568566 ZDHHC6Q9H6R6 413 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 ERVMER34-1Q9H9K5 563 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 RBM22Q9NW64 420 aaKnown RBP eCLIP8.44□□□□□ -1.06
TSC2-223ENST00000568566 LCMT1Q9UIC8 334 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 ITM2BQ9Y287 266 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 PCDHGC4Q9Y5F7 938 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 FLNCQ14315 2725 aa8.44□□□□□ -1.06
TSC2-223ENST00000568566 LRRK2Q5S007 2527 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 TDRD6O60522 2096 aaKnown RBP8.43□□□□□ -1.06
TSC2-223ENST00000568566 A8MX80 341 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 MIF4GDA9UHW6 222 aaKnown RBP8.43□□□□□ -1.06
TSC2-223ENST00000568566 ZNF487B1APH4 448 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 B8ZZF3 427 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 PDE2AO00408 941 aaPredicted RBP8.43□□□□□ -1.06
TSC2-223ENST00000568566 MATN3O15232 486 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 KLK10O43240 276 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 LATO43561 262 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 NRDCO43847 1150 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 CEP104O60308 925 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 USP12O75317 370 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 UGT2B4P06133 528 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 MYF5P13349 255 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 C6P13671 934 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 TIMP2P16035 220 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 C5AR1P21730 350 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 PTPN7P35236 360 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 ABL2P42684 1182 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 KCNJ1P48048 391 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 VASPP50552 380 aaPredicted RBP8.43□□□□□ -1.06
TSC2-223ENST00000568566 SCNN1BP51168 640 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 ZNF135P52742 658 aaPredicted RBP8.43□□□□□ -1.06
TSC2-223ENST00000568566 GDF10P55107 478 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 GNG11P61952 73 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 E2F1Q01094 437 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 KCNC4Q03721 635 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 SLC20A2Q08357 652 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 PPIDQ08752 370 aaKnown RBP8.43□□□□□ -1.06
TSC2-223ENST00000568566 AP1B1Q10567 949 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 TRAF2Q12933 501 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 NOMO1Q15155 1222 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 TMCO4Q5TGY1 634 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 NYAP1Q6ZVC0 841 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 PRICKLE2Q7Z3G6 844 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 SLC13A5Q86YT5 568 aaPredicted RBP8.43□□□□□ -1.06
TSC2-223ENST00000568566 CCDC13Q8IYE1 715 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 CACTIN-AS1Q8N1I8 211 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 LZTR1Q8N653 840 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 PCDH20Q8N6Y1 951 aaKnown RBP8.43□□□□□ -1.06
TSC2-223ENST00000568566 ZNF557Q8N988 423 aaPredicted RBP8.43□□□□□ -1.06
TSC2-223ENST00000568566 MFSD2AQ8NA29 543 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 KDM1BQ8NB78 822 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 OR2AP1Q8NGE2 309 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 SPATA22Q8NHS9 363 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 TTC9Q92623 222 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 KLK6Q92876 244 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 WBP1Q96G27 269 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 RBM41Q96IZ5 413 aaKnown RBP8.43□□□□□ -1.06
TSC2-223ENST00000568566 ZNF578Q96N58 590 aaPredicted RBP8.43□□□□□ -1.06
TSC2-223ENST00000568566 KLHL32Q96NJ5 620 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 TSGA13Q96PP4 275 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 IL12RB2Q99665 862 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 MYOCQ99972 504 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 HEPHQ9BQS7 1158 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 RETREG1Q9H6L5 497 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 USP29Q9HBJ7 922 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 NOD2Q9HC29 1040 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 UCKL1Q9NWZ5 548 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 DNPEPQ9ULA0 475 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 HPCAL4Q9UM19 191 aa8.43□□□□□ -1.06
TSC2-223ENST00000568566 H7C0C1 242 aa8.42□□□□□ -1.06
TSC2-223ENST00000568566 KPNA3O00505 521 aaPredicted RBP8.42□□□□□ -1.06
TSC2-223ENST00000568566 ZSCAN12O43309 604 aa8.42□□□□□ -1.06
TSC2-223ENST00000568566 OPA1O60313 960 aa8.42□□□□□ -1.06
TSC2-223ENST00000568566 CSO75390 466 aaKnown RBP8.42□□□□□ -1.06
TSC2-223ENST00000568566 GSRP00390 522 aa8.42□□□□□ -1.06
TSC2-223ENST00000568566 PRLP01236 227 aa8.42□□□□□ -1.06
TSC2-223ENST00000568566 PDHA1P08559 390 aa8.42□□□□□ -1.06
TSC2-223ENST00000568566 ZSCAN5DPP0CG00 497 aa8.42□□□□□ -1.06
TSC2-223ENST00000568566 CCNB1P14635 433 aa8.42□□□□□ -1.06
TSC2-223ENST00000568566 TGM2P21980 687 aa8.42□□□□□ -1.06
TSC2-223ENST00000568566 CCNCP24863 283 aa8.42□□□□□ -1.06
TSC2-223ENST00000568566 PTPN3P26045 913 aa8.42□□□□□ -1.06
TSC2-223ENST00000568566 NNMTP40261 264 aa8.42□□□□□ -1.06
TSC2-223ENST00000568566 MMP13P45452 471 aa8.42□□□□□ -1.06
TSC2-223ENST00000568566 ATP5OP48047 213 aa8.42□□□□□ -1.06
TSC2-223ENST00000568566 EIF3EP60228 445 aaKnown RBP8.42□□□□□ -1.06
TSC2-223ENST00000568566 VAC14Q08AM6 782 aa8.42□□□□□ -1.06
TSC2-223ENST00000568566 TFDP2Q14188 446 aa8.42□□□□□ -1.06
TSC2-223ENST00000568566 ELAVL3Q14576 367 aaKnown RBP8.42□□□□□ -1.06
TSC2-223ENST00000568566 INO80DQ53TQ3 878 aaPredicted RBP8.42□□□□□ -1.06
TSC2-223ENST00000568566 PIP5KL1Q5T9C9 394 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms