RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 ARL8AQ96BM9 186 aa18.8■□□□□ 0.6
COMMD4-213ENST00000565834 PGM2Q96G03 612 aa18.8■□□□□ 0.6
COMMD4-213ENST00000565834 DNAJC1Q96KC8 554 aaKnown RBP18.8■□□□□ 0.6
COMMD4-213ENST00000565834 DHRS4Q9BTZ2 278 aa18.8■□□□□ 0.6
COMMD4-213ENST00000565834 BCCIPQ9P287 314 aaKnown RBP eCLIP18.8■□□□□ 0.6
COMMD4-213ENST00000565834 DKK3Q9UBP4 350 aa18.8■□□□□ 0.6
COMMD4-213ENST00000565834 CTNNAL1Q9UBT7 734 aa18.8■□□□□ 0.6
COMMD4-213ENST00000565834 PPIL1Q9Y3C6 166 aa18.8■□□□□ 0.6
COMMD4-213ENST00000565834 H3BQF6 201 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 LPOP22079 712 aaPredicted RBP18.79■□□□□ 0.6
COMMD4-213ENST00000565834 HNF1BP35680 557 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 WASP42768 502 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 ARCN1P48444 511 aaKnown RBP18.79■□□□□ 0.6
COMMD4-213ENST00000565834 RASA2Q15283 850 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 SLC44A4Q53GD3 710 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 HSP90AA5PQ58FG0 334 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 MARK2Q7KZI7 788 aaKnown RBP18.79■□□□□ 0.6
COMMD4-213ENST00000565834 SLC26A11Q86WA9 606 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 TTC30BQ8N4P2 665 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 OR13C4Q8NGS5 318 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 KCNV2Q8TDN2 545 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 HCAR2Q8TDS4 363 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 SCRN2Q96FV2 425 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 GPR63Q9BZJ6 419 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 PRSS16Q9NQE7 514 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 FAM53CQ9NYF3 392 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 TBK1Q9UHD2 729 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 LGALS13Q9UHV8 139 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 DUSP12Q9UNI6 340 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 KPNA3O00505 521 aaPredicted RBP18.79■□□□□ 0.6
COMMD4-213ENST00000565834 NFKBIAP25963 317 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 ARNTP27540 789 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 PRAMEP78395 509 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 TMPRSS15P98073 1019 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 ACVR1Q04771 509 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 TMED2Q15363 201 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 C2orf27AQ580R0 203 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 TTMPQ5BVD1 217 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 AGBL2Q5U5Z8 902 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 ADGRD1Q6QNK2 874 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 TPRG1Q6ZUI0 275 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 LYSMD3Q7Z3D4 306 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 OR4K2Q8NGD2 314 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 PIP4K2CQ8TBX8 421 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 DCAKDQ8WVC6 231 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 FAM3CQ92520 227 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 MCCC1Q96RQ3 725 aaPredicted RBP18.79■□□□□ 0.6
COMMD4-213ENST00000565834 LYSMD1Q96S90 227 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 FAM129BQ96TA1 746 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 STMN4Q9H169 189 aaPredicted RBP18.79■□□□□ 0.6
COMMD4-213ENST00000565834 NLE1Q9NVX2 485 aaPredicted RBP18.79■□□□□ 0.6
COMMD4-213ENST00000565834 POLR3BQ9NW08 1133 aaPredicted RBP18.79■□□□□ 0.6
COMMD4-213ENST00000565834 EURLQ9NYK6 297 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 SARDHQ9UL12 918 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 PPM1HQ9ULR3 514 aa18.79■□□□□ 0.6
COMMD4-213ENST00000565834 SCN8AQ9UQD0 1980 aa18.78■□□□□ 0.6
COMMD4-213ENST00000565834 C1orf232A0A0U1RR37 186 aa18.78■□□□□ 0.6
COMMD4-213ENST00000565834 UPK3BL1B0FP48 263 aa18.78■□□□□ 0.6
COMMD4-213ENST00000565834 UPK3BL2E5RIL1 263 aa18.78■□□□□ 0.6
COMMD4-213ENST00000565834 GOLGA8TH3BQL2 631 aa18.78■□□□□ 0.6
COMMD4-213ENST00000565834 STX7O15400 261 aaKnown RBP18.78■□□□□ 0.6
COMMD4-213ENST00000565834 RPP40O75818 363 aaKnown RBP18.78■□□□□ 0.6
COMMD4-213ENST00000565834 XPAP23025 273 aaPredicted RBP18.78■□□□□ 0.6
COMMD4-213ENST00000565834 ARSDP51689 593 aa18.78■□□□□ 0.6
COMMD4-213ENST00000565834 ZP2Q05996 745 aa18.78■□□□□ 0.6
COMMD4-213ENST00000565834 THOC5Q13769 683 aaKnown RBP18.78■□□□□ 0.6
COMMD4-213ENST00000565834 PTPRCAPQ14761 206 aa18.78■□□□□ 0.6
COMMD4-213ENST00000565834 UGP2Q16851 508 aa18.78■□□□□ 0.6
COMMD4-213ENST00000565834 POM121L1PQ3SYA9 428 aa18.78■□□□□ 0.6
COMMD4-213ENST00000565834 SDE2Q6IQ49 451 aa18.78■□□□□ 0.6
COMMD4-213ENST00000565834 HDAC10Q969S8 669 aa18.78■□□□□ 0.6
COMMD4-213ENST00000565834 ATP6V1G3Q96LB4 118 aa18.78■□□□□ 0.6
COMMD4-213ENST00000565834 ZFYVE1Q9HBF4 777 aa18.78■□□□□ 0.6
COMMD4-213ENST00000565834 IARS2Q9NSE4 1012 aaKnown RBP18.78■□□□□ 0.6
COMMD4-213ENST00000565834 THEGQ9P2T0 379 aa18.78■□□□□ 0.6
COMMD4-213ENST00000565834 SLC17A6Q9P2U8 582 aa18.78■□□□□ 0.6
COMMD4-213ENST00000565834 PKP3Q9Y446 797 aa18.78■□□□□ 0.6
COMMD4-213ENST00000565834 A0A0U1RQS6 177 aa18.77■□□□□ 0.6
COMMD4-213ENST00000565834 NPIPB15A6NHN6 443 aaPredicted RBP18.77■□□□□ 0.6
COMMD4-213ENST00000565834 C16orf96A6NNT2 1141 aa18.77■□□□□ 0.6
COMMD4-213ENST00000565834 HMGB1P1B2RPK0 211 aaPredicted RBP18.77■□□□□ 0.6
COMMD4-213ENST00000565834 C1QTNF3-AMACRE9PGA6 284 aa18.77■□□□□ 0.6
COMMD4-213ENST00000565834 CCL22O00626 93 aa18.77■□□□□ 0.6
COMMD4-213ENST00000565834 SLC7A4O43246 635 aa18.77■□□□□ 0.6
COMMD4-213ENST00000565834 SYNCRIPO60506 623 aaKnown RBP18.77■□□□□ 0.6
COMMD4-213ENST00000565834 UGT1A9O60656 530 aa18.77■□□□□ 0.6
COMMD4-213ENST00000565834 IL1BP01584 269 aa18.77■□□□□ 0.6
COMMD4-213ENST00000565834 CHRM1P11229 460 aaPredicted RBP18.77■□□□□ 0.6
COMMD4-213ENST00000565834 ITGB7P26010 798 aa18.77■□□□□ 0.6
COMMD4-213ENST00000565834 ATP5DP30049 168 aa18.77■□□□□ 0.6
COMMD4-213ENST00000565834 NTSR1P30989 418 aa18.77■□□□□ 0.6
COMMD4-213ENST00000565834 HMGCLP35914 325 aa18.77■□□□□ 0.6
COMMD4-213ENST00000565834 CAMK2GQ13555 558 aaPredicted RBP18.77■□□□□ 0.6
COMMD4-213ENST00000565834 TEDDM1Q5T9Z0 273 aa18.77■□□□□ 0.6
COMMD4-213ENST00000565834 KCTD16Q68DU8 428 aa18.77■□□□□ 0.6
COMMD4-213ENST00000565834 TRMT11Q7Z4G4 463 aaKnown RBP18.77■□□□□ 0.6
COMMD4-213ENST00000565834 OR6P1Q8NGX9 317 aa18.77■□□□□ 0.6
COMMD4-213ENST00000565834 GABPB2Q8TAK5 448 aaPredicted RBP18.77■□□□□ 0.6
COMMD4-213ENST00000565834 PPP1R16AQ96I34 528 aa18.77■□□□□ 0.6
COMMD4-213ENST00000565834 TBATAQ96M53 351 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms