RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 NAIF1Q69YI7 327 aaPredicted RBP4.77□□□□□ -1.65
CDR2-203ENST00000563573 SCYL2Q6P3W7 929 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 OLFML1Q6UWY5 402 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 RSRC2Q7L4I2 434 aaKnown RBP4.77□□□□□ -1.65
CDR2-203ENST00000563573 BEND5Q7L4P6 421 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 STRADAQ7RTN6 431 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 MAP7D3Q8IWC1 876 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 RCOR2Q8IZ40 523 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 EMC1Q8N766 993 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 CEP112Q8N8E3 955 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 NIPA2Q8N8Q9 360 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 LRRC57Q8N9N7 239 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 KCTD6Q8NC69 237 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 MNS1Q8NEH6 495 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 ZMIZ2Q8NF64 920 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 JOSD2Q8TAC2 188 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 SCAMP5Q8TAC9 235 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 FAM172AQ8WUF8 416 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 MAIP1Q8WWC4 291 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 ATXN2LQ8WWM7 1075 aaKnown RBP4.77□□□□□ -1.65
CDR2-203ENST00000563573 ARNTL2Q8WYA1 636 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 OVCA2Q8WZ82 227 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 ST8SIA2Q92186 375 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 FBXO32Q969P5 355 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 HES6Q96HZ4 224 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 HIST1H2AHQ96KK5 128 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 CFAP57Q96MR6 1250 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 WDR24Q96S15 920 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 HIST1H2AJQ99878 128 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 MAK16Q9BXY0 300 aaKnown RBP4.77□□□□□ -1.65
CDR2-203ENST00000563573 WDCPQ9H6R7 721 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 TLE6Q9H808 572 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 CERS4Q9HA82 394 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 OLA1Q9NTK5 396 aaKnown RBP4.77□□□□□ -1.65
CDR2-203ENST00000563573 IL37Q9NZH6 218 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 SNX12Q9UMY4 172 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 DMRT1Q9Y5R6 373 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 CHD7Q9P2D1 2997 aa4.77□□□□□ -1.65
CDR2-203ENST00000563573 SZT2Q5T011 3432 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 A0A0C4DFX4 3053 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 DENND4CQ5VZ89 1909 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 SYNJ2BP-COX16A0A087WUM0 186 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 A0A1W2PPC1 479 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 YJEFN3A6XGL0 299 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 HIDE1A8MVS5 230 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 E7ENQ6 273 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 M0QYT0 321 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 PSTPIP1O43586 416 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 NCK2O43639 380 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 CEP104O60308 925 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 DAB1O75553 588 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 SOAT2O75908 522 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 ENDOD1O94919 500 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 SEC24AO95486 1093 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 TRUB2O95900 331 aaKnown RBP4.76□□□□□ -1.65
CDR2-203ENST00000563573 HNRNPA1P09651 372 aaKnown RBP eCLIP4.76□□□□□ -1.65
CDR2-203ENST00000563573 SPATA31D3P0C874 917 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 SRGAP2BP0DMP2 458 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 SLC2A3P11169 496 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 RARGP13631 454 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 POU3F2P20265 443 aaPredicted RBP4.76□□□□□ -1.65
CDR2-203ENST00000563573 DNAJB1P25685 340 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 CD40P25942 277 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 CTNNA1P35221 906 aaKnown RBP4.76□□□□□ -1.65
CDR2-203ENST00000563573 ATP5C1P36542 298 aaKnown RBP4.76□□□□□ -1.65
CDR2-203ENST00000563573 GPR15P49685 360 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 PEX5P50542 639 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 DNA2P51530 1060 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 CLCN4P51793 760 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 AIF1P55008 147 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 SLC25A3Q00325 362 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 CKAP4Q07065 602 aaKnown RBP4.76□□□□□ -1.65
CDR2-203ENST00000563573 TAF10Q12962 218 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 NME3Q13232 169 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 MTA1Q13330 715 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 TAF5Q15542 800 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 CCDC142Q17RM4 750 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 WHAMMP3Q1A5X7 153 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 C15orf59Q2T9L4 293 aaPredicted RBP4.76□□□□□ -1.65
CDR2-203ENST00000563573 HECTD3Q5T447 861 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 LRRC38Q5VT99 294 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 SDHAF4Q5VUM1 108 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 LAIR1Q6GTX8 287 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 FAM109BQ6ICB4 259 aaPredicted RBP4.76□□□□□ -1.65
CDR2-203ENST00000563573 SPATA31D4Q6ZUB0 917 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 ZNF627Q7L945 461 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 GPRIN1Q7Z2K8 1008 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 DNAJB7Q7Z6W7 309 aaPredicted RBP4.76□□□□□ -1.65
CDR2-203ENST00000563573 ZNF575Q86XF7 245 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 CCDC50Q8IVM0 306 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 ZNF276Q8N554 614 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 ATP6V0D2Q8N8Y2 350 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 EXD1Q8NHP7 514 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 CLEC4CQ8WTT0 213 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 NDRG1Q92597 394 aaKnown RBP4.76□□□□□ -1.65
CDR2-203ENST00000563573 CENPIQ92674 756 aaPredicted RBP4.76□□□□□ -1.65
CDR2-203ENST00000563573 PSMG2Q969U7 264 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 TIFAQ96CG3 184 aa4.76□□□□□ -1.65
CDR2-203ENST00000563573 PGAP3Q96FM1 320 aaPredicted RBP4.76□□□□□ -1.65
CDR2-203ENST00000563573 RBM41Q96IZ5 413 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms