RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 LRRC49Q8IUZ0 686 aa3.6□□□□□ -1.83
LINC01416-201ENST00000563553 ZNF34Q8IZ26 560 aa3.6□□□□□ -1.83
LINC01416-201ENST00000563553 ICA1LQ8NDH6 482 aa3.6□□□□□ -1.83
LINC01416-201ENST00000563553 GDAP1Q8TB36 358 aa3.6□□□□□ -1.83
LINC01416-201ENST00000563553 SLC35G2Q8TBE7 412 aa3.6□□□□□ -1.83
LINC01416-201ENST00000563553 ZNF384Q8TF68 577 aa3.6□□□□□ -1.83
LINC01416-201ENST00000563553 CASP10Q92851 521 aa3.6□□□□□ -1.83
LINC01416-201ENST00000563553 BORCS5Q969J3 196 aa3.6□□□□□ -1.83
LINC01416-201ENST00000563553 CDK5RAP3Q96JB5 506 aa3.6□□□□□ -1.83
LINC01416-201ENST00000563553 MAK16Q9BXY0 300 aaKnown RBP3.6□□□□□ -1.83
LINC01416-201ENST00000563553 TRABDQ9H4I3 376 aa3.6□□□□□ -1.83
LINC01416-201ENST00000563553 KIAA1586Q9HCI6 787 aa3.6□□□□□ -1.83
LINC01416-201ENST00000563553 VPS45Q9NRW7 570 aa3.6□□□□□ -1.83
LINC01416-201ENST00000563553 NINJ2Q9NZG7 142 aa3.6□□□□□ -1.83
LINC01416-201ENST00000563553 HACD3Q9P035 362 aa3.6□□□□□ -1.83
LINC01416-201ENST00000563553 EPS15L1Q9UBC2 864 aa3.6□□□□□ -1.83
LINC01416-201ENST00000563553 TAGLN3Q9UI15 199 aa3.6□□□□□ -1.83
LINC01416-201ENST00000563553 CDH7Q9ULB5 785 aa3.6□□□□□ -1.83
LINC01416-201ENST00000563553 SLC45A2Q9UMX9 530 aa3.6□□□□□ -1.83
LINC01416-201ENST00000563553 PCDHA6Q9UN73 950 aa3.6□□□□□ -1.83
LINC01416-201ENST00000563553 FAF1Q9UNN5 650 aaPredicted RBP3.6□□□□□ -1.83
LINC01416-201ENST00000563553 PLA2G4CQ9UP65 541 aa3.6□□□□□ -1.83
LINC01416-201ENST00000563553 NAALADL1Q9UQQ1 740 aa3.6□□□□□ -1.83
LINC01416-201ENST00000563553 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.6□□□□□ -1.83
LINC01416-201ENST00000563553 ZNF142P52746 1687 aaPredicted RBP3.59□□□□□ -1.83
LINC01416-201ENST00000563553 SCN7AQ01118 1682 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 SPATA31A1Q5TZJ5 1347 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 C15orf38-AP3S2A0A0A6YYH1 394 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 MYMKA6NI61 221 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 SMIM23A6NLE4 172 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 FZD9O00144 591 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 PDXKO00764 312 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 TYROBPO43914 113 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 SUPT3HO75486 399 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 PDE8BO95263 885 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 PLEKHA8P1O95397 391 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 ZCCHC18P0CG32 403 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 GZMAP12544 262 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 MYL4P12829 197 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 MYL6BP14649 208 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 FGFR2P21802 821 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 PRDX6P30041 224 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 HMOX2P30519 316 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 TTKP33981 857 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 PHBP35232 272 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 HALP42357 657 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 SLCO1A2P46721 670 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 DNA2P51530 1060 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 ARPC4P59998 168 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 RELAQ04206 551 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 BTKQ06187 659 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 PPIDQ08752 370 aaKnown RBP3.59□□□□□ -1.83
LINC01416-201ENST00000563553 COASYQ13057 564 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 KLF1Q13351 362 aaPredicted RBP3.59□□□□□ -1.83
LINC01416-201ENST00000563553 GRM4Q14833 912 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 MMEL1Q495T6 779 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 DEPDC1Q5TB30 811 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 OGFRL1Q5TC84 451 aaPredicted RBP3.59□□□□□ -1.83
LINC01416-201ENST00000563553 KRT79Q5XKE5 535 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 DUS1LQ6P1R4 473 aaKnown RBP3.59□□□□□ -1.83
LINC01416-201ENST00000563553 ZFP1Q6P2D0 407 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 RFWD3Q6PCD5 774 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 KLHL35Q6PF15 583 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 RBM44Q6ZP01 1051 aaKnown RBP3.59□□□□□ -1.83
LINC01416-201ENST00000563553 LINC00299Q6ZSB3 139 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 HAUS6Q7Z4H7 955 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 ARPINQ7Z6K5 226 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 NEK8Q86SG6 692 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 ZCCHC9Q8N567 271 aaKnown RBP3.59□□□□□ -1.83
LINC01416-201ENST00000563553 CD101Q93033 1021 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 KLHL32Q96NJ5 620 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 HGH1Q9BTY7 390 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 RTFDC1Q9BY42 306 aaPredicted RBP3.59□□□□□ -1.83
LINC01416-201ENST00000563553 TRIM31Q9BZY9 425 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 WWP1Q9H0M0 922 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 C6orf50Q9HD87 102 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 BLOC1S4Q9NUP1 217 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 BARHL2Q9NY43 387 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 TAS2R1Q9NYW7 299 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 IGSF9Q9P2J2 1179 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 LRIT1Q9P2V4 623 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 PSMC3IPQ9P2W1 217 aaPredicted RBP3.59□□□□□ -1.83
LINC01416-201ENST00000563553 DKK3Q9UBP4 350 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 RSL24D1Q9UHA3 163 aaKnown RBP3.59□□□□□ -1.83
LINC01416-201ENST00000563553 GNPTGQ9UJJ9 305 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.59□□□□□ -1.83
LINC01416-201ENST00000563553 IPPQ9Y573 584 aa3.59□□□□□ -1.83
LINC01416-201ENST00000563553 ATP2A1O14983 1001 aa3.59□□□□□ -1.84
LINC01416-201ENST00000563553 TPD52L2O43399 206 aaKnown RBP3.59□□□□□ -1.84
LINC01416-201ENST00000563553 PCDHGA12O60330 932 aa3.59□□□□□ -1.84
LINC01416-201ENST00000563553 PRDM1O75626 825 aa3.59□□□□□ -1.84
LINC01416-201ENST00000563553 GH1P01241 217 aa3.59□□□□□ -1.84
LINC01416-201ENST00000563553 PDGFRBP09619 1106 aa3.59□□□□□ -1.84
LINC01416-201ENST00000563553 PHKG2P15735 406 aa3.59□□□□□ -1.84
LINC01416-201ENST00000563553 ZNF23P17027 643 aa3.59□□□□□ -1.84
LINC01416-201ENST00000563553 C5AR1P21730 350 aa3.59□□□□□ -1.84
LINC01416-201ENST00000563553 PON1P27169 355 aa3.59□□□□□ -1.84
LINC01416-201ENST00000563553 FOLR3P41439 243 aa3.59□□□□□ -1.84
LINC01416-201ENST00000563553 TRPC1P48995 793 aa3.59□□□□□ -1.84
LINC01416-201ENST00000563553 VPS41P49754 854 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms