RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 DNAJC1Q96KC8 554 aaKnown RBP10.19□□□□□ -0.78
SMG1-208ENST00000563448 UGT1A7Q9HAW7 530 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 UGT1A10Q9HAW8 530 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 UGT1A8Q9HAW9 530 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 PPANQ9NQ55 473 aaKnown RBP10.19□□□□□ -0.78
SMG1-208ENST00000563448 C20orf96Q9NUD7 363 aaPredicted RBP10.19□□□□□ -0.78
SMG1-208ENST00000563448 HACD3Q9P035 362 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 SLC24A2Q9UI40 661 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 RIMKLBQ9ULI2 386 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 PPM1HQ9ULR3 514 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 PIKFYVEQ9Y2I7 2098 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 UNC80Q8N2C7 3258 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 GOLGA8KD6RF30 607 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 GOLGA8TH3BQL2 631 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 FAM155BO75949 473 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 VAPBO95292 243 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 PRNPP04156 253 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 MYZAPP0CAP1 466 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 TIMP2P16035 220 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 PSMA3P25788 255 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 MSH2P43246 934 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 ARSDP51689 593 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 METAP1P53582 386 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 SEMG2Q02383 582 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 E2F5Q15329 346 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 POM121L1PQ3SYA9 428 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 HSP90AA5PQ58FG0 334 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 LRRC73Q5JTD7 316 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 TEDDM1Q5T9Z0 273 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 PDPK2PQ6A1A2 396 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 BRAT1Q6PJG6 821 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 TPRG1Q6ZUI0 275 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 MARK2Q7KZI7 788 aaKnown RBP10.19□□□□□ -0.78
SMG1-208ENST00000563448 LYSMD3Q7Z3D4 306 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 RASSF3Q86WH2 238 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 TDRPQ86YL5 185 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 CYP4X1Q8N118 509 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 KCNV2Q8TDN2 545 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 SLC44A1Q8WWI5 657 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 FAM3CQ92520 227 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 PEX13Q92968 403 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 ARRDC3Q96B67 414 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 MSANTD3Q96H12 275 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 MCCC1Q96RQ3 725 aaPredicted RBP10.19□□□□□ -0.78
SMG1-208ENST00000563448 LYSMD1Q96S90 227 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 AGAP2Q99490 1192 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 CENPHQ9H3R5 247 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 TRABDQ9H4I3 376 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 IARS2Q9NSE4 1012 aaKnown RBP10.19□□□□□ -0.78
SMG1-208ENST00000563448 NLE1Q9NVX2 485 aaPredicted RBP10.19□□□□□ -0.78
SMG1-208ENST00000563448 DKK3Q9UBP4 350 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 GGT7Q9UJ14 662 aa10.19□□□□□ -0.78
SMG1-208ENST00000563448 NPIPB15A6NHN6 443 aaPredicted RBP10.18□□□□□ -0.78
SMG1-208ENST00000563448 C19orf67A6NJJ6 358 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 C2orf81A6NN90 581 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 C16orf96A6NNT2 1141 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 A8MX80 341 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 KPNA3O00505 521 aaPredicted RBP10.18□□□□□ -0.78
SMG1-208ENST00000563448 CDH16O75309 829 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 CLDN7O95471 211 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 SLC4A1P02730 911 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 F7P08709 466 aaPredicted RBP10.18□□□□□ -0.78
SMG1-208ENST00000563448 PAMP19021 973 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 CD72P21854 359 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 LPOP22079 712 aaPredicted RBP10.18□□□□□ -0.78
SMG1-208ENST00000563448 POLR2LP62875 67 aaKnown RBP10.18□□□□□ -0.78
SMG1-208ENST00000563448 CAMK2GQ13555 558 aaPredicted RBP10.18□□□□□ -0.78
SMG1-208ENST00000563448 MLF2Q15773 248 aaPredicted RBP10.18□□□□□ -0.78
SMG1-208ENST00000563448 UGP2Q16851 508 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 SKIDA1Q1XH10 827 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 TNFAIP8L3Q5GJ75 292 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 CRTC1Q6UUV9 634 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 PARS2Q7L3T8 475 aaKnown RBP10.18□□□□□ -0.78
SMG1-208ENST00000563448 CROCCP2Q86T23 111 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 TSPAN33Q86UF1 283 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 LRRC6Q86X45 466 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 NDUFAF2Q8N183 169 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 IL17RCQ8NAC3 791 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 OR4K2Q8NGD2 314 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 HDAC10Q969S8 669 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 TBATAQ96M53 351 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 GABRG3Q99928 467 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 SUDS3Q9H7L9 328 aaPredicted RBP10.18□□□□□ -0.78
SMG1-208ENST00000563448 PPCSQ9HAB8 311 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 BPIFA1Q9NP55 256 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 POLR3BQ9NW08 1133 aaPredicted RBP10.18□□□□□ -0.78
SMG1-208ENST00000563448 IL17CQ9P0M4 197 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 THEGQ9P2T0 379 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 TBK1Q9UHD2 729 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 LGALS13Q9UHV8 139 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 PSAT1Q9Y617 370 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 TRPM6Q9BX84 2022 aa10.18□□□□□ -0.78
SMG1-208ENST00000563448 OR51F1A6NGY5 319 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 GOLGA6L10A6NI86 522 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 FOXO6A8MYZ6 492 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 UPK3BL1B0FP48 263 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 UPK3BL2E5RIL1 263 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 RGS16O15492 202 aaPredicted RBP10.17□□□□□ -0.78
SMG1-208ENST00000563448 ADAM23O75077 832 aa10.17□□□□□ -0.78
SMG1-208ENST00000563448 RPP40O75818 363 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms