RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 SLC6A4P31645 630 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 RPS5P46782 204 aaKnown RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 GCNT1Q02742 428 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 DNAJB7Q7Z6W7 309 aaPredicted RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 WDR49Q8IV35 697 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 SKA2Q8WVK7 121 aaPredicted RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 KCNN2Q9H2S1 579 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 TOR3AQ9H497 397 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 RPF2Q9H7B2 306 aaKnown RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 SACM1LQ9NTJ5 587 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 CMTM6Q9NX76 183 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 PCDH10Q9P2E7 1040 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 MALT1Q9UDY8 824 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 CYTH4Q9UIA0 394 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 DNPEPQ9ULA0 475 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 PNMA8BQ9ULN7 279 aaPredicted RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 SPO11Q9Y5K1 396 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 RIMBP2O15034 1052 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 ACO1P21399 889 aaKnown RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 S100PP25815 95 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 ALDH3A2P51648 485 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 TFAMQ00059 246 aaKnown RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 BIKQ13323 160 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 VMACQ2NL98 169 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 PID1Q7Z2X4 250 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 DCAF4Q8WV16 495 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 FEM1CQ96JP0 617 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 SLITRK1Q96PX8 696 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 TM9SF3Q9HD45 589 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 FAM86C2PA6NEL3 165 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 M0QYV0 167 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 OR5F1O95221 314 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 LDOC1O95751 146 aaPredicted RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 NAT2P11245 290 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 HOXD13P35453 343 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 MTHFRP42898 656 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 FSCN1Q16658 493 aaKnown RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 METTL2BQ6P1Q9 378 aaKnown RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 GFOD1Q9NXC2 390 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 KHDRBS3O75525 346 aaKnown RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 CYP3A4P08684 503 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 DLDP09622 509 aaKnown RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 ZNF14P17017 642 aaPredicted RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 FUT4P22083 530 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 GRIA4P48058 902 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 DPYSL3Q14195 570 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 UBE2UQ5VVX9 321 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 ZDHHC24Q6UX98 284 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 GDPD1Q8N9F7 314 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 WDSUB1Q8N9V3 476 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 MFSD2AQ8NA29 543 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 ZDHHC12Q96GR4 267 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 FAM49AQ9H0Q0 323 aaPredicted RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 LATS2Q9NRM7 1088 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 B3GNT2Q9NY97 397 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 VPS28Q9UK41 221 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 A0A0B4J269 797 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 PLEKHG3A1L390 1219 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 C1orf196B1AJZ1 125 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 CDC40O60508 579 aaKnown RBP eCLIP6.27□□□□□ -1.41
CLK3-212ENST00000563418 ERN1O75460 977 aaKnown RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 BMP1P13497 986 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 XRCC1P18887 633 aaPredicted RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 RAB5CP51148 216 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 CERKLQ49MI3 558 aaPredicted RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 LSMEM1Q8N8F7 131 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 ABHD11Q8NFV4 315 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 EEF1AKMT1Q8WVE0 214 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 GMCL1Q96IK5 515 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 ALPK1Q96QP1 1244 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 SCPEP1Q9HB40 452 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 LRRC4Q9HBW1 653 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 MAGED2Q9UNF1 606 aaPredicted RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 CYP3A7-CYP3A51PA0A087WV96 503 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 SPDYE2BA6NHP3 402 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 SPDYE6P0CI01 402 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 NR2F6P10588 404 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 GPD1P21695 349 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 CYP3A7P24462 503 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 SLC9A5Q14940 896 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 SNAPC1Q16533 368 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 TIGD6Q17RP2 521 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 PHF10Q8WUB8 498 aaKnown RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 NRG4Q8WWG1 115 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 GFM1Q96RP9 751 aaKnown RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 S100A13Q99584 98 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 PRKD2Q9BZL6 878 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 ALG2Q9H553 416 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 AGPAT3Q9NRZ7 376 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 GLTPQ9NZD2 209 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 ADAMTS6Q9UKP5 1117 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 TESPA1A2RU30 521 aaPredicted RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 TOR1BO14657 336 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 PTPN9P43378 593 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 IDH3AP50213 366 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 GRB10Q13322 594 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 COL28A1Q2UY09 1125 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 FAM160B1Q5W0V3 765 aa6.27□□□□□ -1.41
CLK3-212ENST00000563418 CCDC71Q8IV32 467 aaPredicted RBP6.27□□□□□ -1.41
CLK3-212ENST00000563418 ANKFN1Q8N957 763 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms