RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 ACOX1Q15067 660 aa16.64■□□□□ 0.25
CMTM3-205ENST00000562707 MAP9Q49MG5 647 aa16.64■□□□□ 0.25
CMTM3-205ENST00000562707 ATG14Q6ZNE5 492 aa16.64■□□□□ 0.25
CMTM3-205ENST00000562707 VASH2Q86V25 355 aa16.64■□□□□ 0.25
CMTM3-205ENST00000562707 PIM3Q86V86 326 aa16.64■□□□□ 0.25
CMTM3-205ENST00000562707 SLITRK4Q8IW52 837 aa16.64■□□□□ 0.25
CMTM3-205ENST00000562707 NEK11Q8NG66 645 aa16.64■□□□□ 0.25
CMTM3-205ENST00000562707 AGPAT1Q99943 283 aa16.64■□□□□ 0.25
CMTM3-205ENST00000562707 CINPQ9BW66 212 aaPredicted RBP16.64■□□□□ 0.25
CMTM3-205ENST00000562707 WDR26Q9H7D7 661 aa16.64■□□□□ 0.25
CMTM3-205ENST00000562707 STARD5Q9NSY2 213 aa16.64■□□□□ 0.25
CMTM3-205ENST00000562707 TCRBV5S1A1TA0A578 114 aa16.63■□□□□ 0.25
CMTM3-205ENST00000562707 EIF3CLB5ME19 914 aaKnown RBP16.63■□□□□ 0.25
CMTM3-205ENST00000562707 EEF2KO00418 725 aaKnown RBP16.63■□□□□ 0.25
CMTM3-205ENST00000562707 TEX33O43247 280 aa16.63■□□□□ 0.25
CMTM3-205ENST00000562707 RGRP47804 291 aa16.63■□□□□ 0.25
CMTM3-205ENST00000562707 B4GALNT1Q00973 533 aa16.63■□□□□ 0.25
CMTM3-205ENST00000562707 NSUN2Q08J23 767 aaKnown RBP eCLIP16.63■□□□□ 0.25
CMTM3-205ENST00000562707 RALGDSQ12967 914 aa16.63■□□□□ 0.25
CMTM3-205ENST00000562707 BIRC2Q13490 618 aa16.63■□□□□ 0.25
CMTM3-205ENST00000562707 RFTN1Q14699 578 aaPredicted RBP16.63■□□□□ 0.25
CMTM3-205ENST00000562707 AMZ1Q400G9 498 aa16.63■□□□□ 0.25
CMTM3-205ENST00000562707 AFMIDQ63HM1 303 aa16.63■□□□□ 0.25
CMTM3-205ENST00000562707 PNCKQ6P2M8 343 aa16.63■□□□□ 0.25
CMTM3-205ENST00000562707 DPPA4Q7L190 304 aa16.63■□□□□ 0.25
CMTM3-205ENST00000562707 SFTPA2Q8IWL1 248 aa16.63■□□□□ 0.25
CMTM3-205ENST00000562707 ECHDC3Q96DC8 303 aa16.63■□□□□ 0.25
CMTM3-205ENST00000562707 EIF3CQ99613 913 aaKnown RBP16.63■□□□□ 0.25
CMTM3-205ENST00000562707 B3GNT4Q9C0J1 378 aa16.63■□□□□ 0.25
CMTM3-205ENST00000562707 SEMA6CQ9H3T2 930 aa16.63■□□□□ 0.25
CMTM3-205ENST00000562707 DHX35Q9H5Z1 703 aaKnown RBP16.63■□□□□ 0.25
CMTM3-205ENST00000562707 SP110Q9HB58 689 aa16.63■□□□□ 0.25
CMTM3-205ENST00000562707 GPATCH2LQ9NWQ4 482 aa16.63■□□□□ 0.25
CMTM3-205ENST00000562707 FOXJ2Q9P0K8 574 aa16.63■□□□□ 0.25
CMTM3-205ENST00000562707 SIK3Q9Y2K2 1263 aa16.63■□□□□ 0.25
CMTM3-205ENST00000562707 PCDHGA4Q9Y5G9 962 aa16.63■□□□□ 0.25
CMTM3-205ENST00000562707 PRSS38A1L453 326 aa16.62■□□□□ 0.25
CMTM3-205ENST00000562707 RHPN2P1A8MT19 583 aa16.62■□□□□ 0.25
CMTM3-205ENST00000562707 A8MX80 341 aa16.62■□□□□ 0.25
CMTM3-205ENST00000562707 B4GAT1O43505 415 aa16.62■□□□□ 0.25
CMTM3-205ENST00000562707 CPNE6O95741 557 aa16.62■□□□□ 0.25
CMTM3-205ENST00000562707 FAM87AP0C7U9 286 aa16.62■□□□□ 0.25
CMTM3-205ENST00000562707 ALDH4A1P30038 563 aa16.62■□□□□ 0.25
CMTM3-205ENST00000562707 SCNN1BP51168 640 aa16.62■□□□□ 0.25
CMTM3-205ENST00000562707 TBR1Q16650 682 aa16.62■□□□□ 0.25
CMTM3-205ENST00000562707 PPP1R15BQ5SWA1 713 aa16.62■□□□□ 0.25
CMTM3-205ENST00000562707 CDKAL1Q5VV42 579 aa16.62■□□□□ 0.25
CMTM3-205ENST00000562707 ACAD10Q6JQN1 1059 aa16.62■□□□□ 0.25
CMTM3-205ENST00000562707 DTX1Q86Y01 620 aa16.62■□□□□ 0.25
CMTM3-205ENST00000562707 ANKRD20A12PQ8NF67 263 aa16.62■□□□□ 0.25
CMTM3-205ENST00000562707 CCL4L1Q8NHW4 92 aa16.62■□□□□ 0.25
CMTM3-205ENST00000562707 SEMA3CQ99985 751 aa16.62■□□□□ 0.25
CMTM3-205ENST00000562707 LGR4Q9BXB1 951 aa16.62■□□□□ 0.25
CMTM3-205ENST00000562707 TRIM4Q9C037 500 aa16.62■□□□□ 0.25
CMTM3-205ENST00000562707 CARS2Q9HA77 564 aaKnown RBP16.62■□□□□ 0.25
CMTM3-205ENST00000562707 RDH14Q9HBH5 336 aa16.62■□□□□ 0.25
CMTM3-205ENST00000562707 KCTD5Q9NXV2 234 aa16.62■□□□□ 0.25
CMTM3-205ENST00000562707 AP4E1Q9UPM8 1137 aa16.62■□□□□ 0.25
CMTM3-205ENST00000562707 RP1P56715 2156 aa16.62■□□□□ 0.25
CMTM3-205ENST00000562707 C9orf172C9J069 976 aa16.61■□□□□ 0.25
CMTM3-205ENST00000562707 DFFAO00273 331 aa16.61■□□□□ 0.25
CMTM3-205ENST00000562707 CCDC172P0C7W6 258 aa16.61■□□□□ 0.25
CMTM3-205ENST00000562707 CCNB1P14635 433 aa16.61■□□□□ 0.25
CMTM3-205ENST00000562707 ITGB6P18564 788 aa16.61■□□□□ 0.25
CMTM3-205ENST00000562707 RENBPP51606 427 aa16.61■□□□□ 0.25
CMTM3-205ENST00000562707 OR1D5P58170 312 aa16.61■□□□□ 0.25
CMTM3-205ENST00000562707 AP1S1P61966 158 aa16.61■□□□□ 0.25
CMTM3-205ENST00000562707 IL10RBQ08334 325 aa16.61■□□□□ 0.25
CMTM3-205ENST00000562707 ILF3Q12906 894 aaKnown RBP eCLIP16.61■□□□□ 0.25
CMTM3-205ENST00000562707 C16orf72Q14CZ0 275 aa16.61■□□□□ 0.25
CMTM3-205ENST00000562707 CLPPQ16740 277 aaPredicted RBP16.61■□□□□ 0.25
CMTM3-205ENST00000562707 TMPRSS9Q7Z410 1059 aa16.61■□□□□ 0.25
CMTM3-205ENST00000562707 MCOLN2Q8IZK6 566 aa16.61■□□□□ 0.25
CMTM3-205ENST00000562707 ZDHHC1Q8WTX9 485 aa16.61■□□□□ 0.25
CMTM3-205ENST00000562707 GSDMCQ9BYG8 508 aa16.61■□□□□ 0.25
CMTM3-205ENST00000562707 SUDS3Q9H7L9 328 aaPredicted RBP16.61■□□□□ 0.25
CMTM3-205ENST00000562707 PHPT1Q9NRX4 125 aaPredicted RBP16.61■□□□□ 0.25
CMTM3-205ENST00000562707 SPATS2LQ9NUQ6 558 aaKnown RBP16.61■□□□□ 0.25
CMTM3-205ENST00000562707 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.6■□□□□ 0.25
CMTM3-205ENST00000562707 A0A1W2PQ67 120 aa16.6■□□□□ 0.25
CMTM3-205ENST00000562707 MYCLP1P12525 358 aaPredicted RBP16.6■□□□□ 0.25
CMTM3-205ENST00000562707 ERCC2P18074 760 aa16.6■□□□□ 0.25
CMTM3-205ENST00000562707 PSMA2P25787 234 aa16.6■□□□□ 0.25
CMTM3-205ENST00000562707 NFKBIAP25963 317 aa16.6■□□□□ 0.25
CMTM3-205ENST00000562707 ATP1A2P50993 1020 aa16.6■□□□□ 0.25
CMTM3-205ENST00000562707 COPB1P53618 953 aaKnown RBP16.6■□□□□ 0.25
CMTM3-205ENST00000562707 MAZP56270 477 aaKnown RBP16.6■□□□□ 0.25
CMTM3-205ENST00000562707 NFKB2Q00653 900 aa16.6■□□□□ 0.25
CMTM3-205ENST00000562707 OGDHQ02218 1023 aa16.6■□□□□ 0.25
CMTM3-205ENST00000562707 PEX6Q13608 980 aa16.6■□□□□ 0.25
CMTM3-205ENST00000562707 ERMARDQ5T6L9 678 aa16.6■□□□□ 0.25
CMTM3-205ENST00000562707 GPBAR1Q8TDU6 330 aa16.6■□□□□ 0.25
CMTM3-205ENST00000562707 NUS1Q96E22 293 aa16.6■□□□□ 0.25
CMTM3-205ENST00000562707 PSKH2Q96QS6 385 aa16.6■□□□□ 0.25
CMTM3-205ENST00000562707 PARVAQ9NVD7 372 aa16.6■□□□□ 0.25
CMTM3-205ENST00000562707 FANCLQ9NW38 375 aa16.6■□□□□ 0.25
CMTM3-205ENST00000562707 CHMP5Q9NZZ3 219 aa16.6■□□□□ 0.25
CMTM3-205ENST00000562707 B4GALT6Q9UBX8 382 aa16.6■□□□□ 0.25
CMTM3-205ENST00000562707 SEPT3Q9UH03 358 aa16.6■□□□□ 0.25
CMTM3-205ENST00000562707 GTF3C3Q9Y5Q9 886 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms