RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 IHHQ14623 411 aa22.57■■□□□ 1.2
SYNGR3-202ENST00000562045 CCNJLQ8IV13 435 aa22.57■■□□□ 1.2
SYNGR3-202ENST00000562045 TMIEQ8NEW7 156 aa22.57■■□□□ 1.2
SYNGR3-202ENST00000562045 IFT43Q96FT9 208 aa22.57■■□□□ 1.2
SYNGR3-202ENST00000562045 TOE1Q96GM8 510 aaKnown RBP22.57■■□□□ 1.2
SYNGR3-202ENST00000562045 FEM1CQ96JP0 617 aa22.57■■□□□ 1.2
SYNGR3-202ENST00000562045 ZIM3Q96PE6 472 aa22.57■■□□□ 1.2
SYNGR3-202ENST00000562045 EBNA1BP2Q99848 306 aaKnown RBP22.57■■□□□ 1.2
SYNGR3-202ENST00000562045 NAT9Q9BTE0 207 aa22.57■■□□□ 1.2
SYNGR3-202ENST00000562045 IL22Q9GZX6 179 aa22.57■■□□□ 1.2
SYNGR3-202ENST00000562045 ARNT2Q9HBZ2 717 aa22.57■■□□□ 1.2
SYNGR3-202ENST00000562045 ARIH1Q9Y4X5 557 aaPredicted RBP22.57■■□□□ 1.2
SYNGR3-202ENST00000562045 ZNF217O75362 1048 aa22.56■■□□□ 1.2
SYNGR3-202ENST00000562045 RNASEH2AO75792 299 aaKnown RBP22.56■■□□□ 1.2
SYNGR3-202ENST00000562045 ADH1BP00325 375 aa22.56■■□□□ 1.2
SYNGR3-202ENST00000562045 C5AR1P21730 350 aa22.56■■□□□ 1.2
SYNGR3-202ENST00000562045 PHBP35232 272 aa22.56■■□□□ 1.2
SYNGR3-202ENST00000562045 EIF3BP55884 814 aaKnown RBP22.56■■□□□ 1.2
SYNGR3-202ENST00000562045 CDK18Q07002 472 aa22.56■■□□□ 1.2
SYNGR3-202ENST00000562045 CNTN1Q12860 1018 aa22.56■■□□□ 1.2
SYNGR3-202ENST00000562045 DENND5AQ6IQ26 1287 aa22.56■■□□□ 1.2
SYNGR3-202ENST00000562045 CASC4Q6P4E1 433 aa22.56■■□□□ 1.2
SYNGR3-202ENST00000562045 NCEH1Q6PIU2 408 aa22.56■■□□□ 1.2
SYNGR3-202ENST00000562045 LRIG3Q6UXM1 1119 aa22.56■■□□□ 1.2
SYNGR3-202ENST00000562045 KDELC2Q7Z4H8 507 aa22.56■■□□□ 1.2
SYNGR3-202ENST00000562045 DSG4Q86SJ6 1040 aa22.56■■□□□ 1.2
SYNGR3-202ENST00000562045 IGDCC3Q8IVU1 814 aa22.56■■□□□ 1.2
SYNGR3-202ENST00000562045 HDDC3Q8N4P3 179 aa22.56■■□□□ 1.2
SYNGR3-202ENST00000562045 STAMBPL1Q96FJ0 436 aa22.56■■□□□ 1.2
SYNGR3-202ENST00000562045 DUSP15Q9H1R2 295 aaPredicted RBP22.56■■□□□ 1.2
SYNGR3-202ENST00000562045 VPS37BQ9H9H4 285 aa22.56■■□□□ 1.2
SYNGR3-202ENST00000562045 WSB2Q9NYS7 404 aaPredicted RBP22.56■■□□□ 1.2
SYNGR3-202ENST00000562045 SAMD15Q9P1V8 674 aa22.56■■□□□ 1.2
SYNGR3-202ENST00000562045 ZC3H7BQ9UGR2 993 aaKnown RBP22.56■■□□□ 1.2
SYNGR3-202ENST00000562045 TNRC6BQ9UPQ9 1833 aaKnown RBP22.56■■□□□ 1.2
SYNGR3-202ENST00000562045 LOC285095A0A1B0GVY8 99 aa22.55■■□□□ 1.2
SYNGR3-202ENST00000562045 SPAG6O75602 509 aa22.55■■□□□ 1.2
SYNGR3-202ENST00000562045 POP4O95707 220 aaKnown RBP22.55■■□□□ 1.2
SYNGR3-202ENST00000562045 UGT2B4P06133 528 aa22.55■■□□□ 1.2
SYNGR3-202ENST00000562045 CA4P22748 312 aa22.55■■□□□ 1.2
SYNGR3-202ENST00000562045 SIM2Q14190 667 aaPredicted RBP22.55■■□□□ 1.2
SYNGR3-202ENST00000562045 SLC1A5Q15758 541 aa22.55■■□□□ 1.2
SYNGR3-202ENST00000562045 UBAP2Q5T6F2 1119 aaKnown RBP22.55■■□□□ 1.2
SYNGR3-202ENST00000562045 ZC3H14Q6PJT7 736 aaKnown RBP22.55■■□□□ 1.2
SYNGR3-202ENST00000562045 PRR23BQ6ZRT6 265 aa22.55■■□□□ 1.2
SYNGR3-202ENST00000562045 SRLQ86TD4 932 aa22.55■■□□□ 1.2
SYNGR3-202ENST00000562045 MPP5Q8N3R9 675 aa22.55■■□□□ 1.2
SYNGR3-202ENST00000562045 GANCQ8TET4 914 aa22.55■■□□□ 1.2
SYNGR3-202ENST00000562045 DOCK9Q9BZ29 2069 aa22.55■■□□□ 1.2
SYNGR3-202ENST00000562045 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 PRNPP04156 253 aa22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 HLA-DPA1P20036 260 aa22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 CD6P30203 668 aa22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 CNR2P34972 360 aa22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 IFFO1Q0D2I5 559 aa22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 PLK5Q496M5 336 aa22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 TMEFF1Q8IYR6 380 aa22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 OMDQ99983 421 aa22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 TDRD1Q9BXT4 1180 aaKnown RBP22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 SYBUQ9NX95 663 aa22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 A0A087WUV0 522 aaPredicted RBP22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 C1QTNF3-AMACRE9PGA6 284 aa22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 GSTA2P09210 222 aa22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 TTC31Q49AM3 519 aaPredicted RBP22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 AGBL4Q5VU57 503 aa22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 C3orf62Q6ZUJ4 267 aa22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 CEP68Q76N32 757 aa22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 CAMK1DQ8IU85 385 aa22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 SUMF1Q8NBK3 374 aa22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 FAM131CQ96AQ9 280 aa22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 SPACA7Q96KW9 195 aa22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 KLHL32Q96NJ5 620 aa22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 IRF2BPLQ9H1B7 796 aa22.54■■□□□ 1.2
SYNGR3-202ENST00000562045 GPR179Q6PRD1 2367 aa22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 MAGEB16A2A368 324 aa22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 FGF1P05230 155 aa22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 PGAM1P18669 254 aa22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 SSTR1P30872 391 aa22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 CHRNA4P43681 627 aa22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 TAS2R38P59533 333 aa22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 GPX6P59796 221 aa22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 FAM193AP78312 1265 aa22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 CRADDP78560 199 aa22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 CERCAMQ5T4B2 595 aa22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 PIP5KL1Q5T9C9 394 aa22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 FAM46CQ5VWP2 391 aa22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 ARMC3Q5W041 872 aa22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 CAPN12Q6ZSI9 719 aa22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 USP30Q70CQ3 517 aa22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 PARS2Q7L3T8 475 aaKnown RBP22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 ZSWIM9Q86XI8 627 aa22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 SLC25A41Q8N5S1 370 aa22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 UHMK1Q8TAS1 419 aaKnown RBP22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 TRIB3Q96RU7 358 aa22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 GPR174Q9BXC1 333 aa22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 SCML1Q9UN30 329 aa22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 RAI2Q9Y5P3 530 aa22.53■■□□□ 1.2
SYNGR3-202ENST00000562045 NFS1Q9Y697 457 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms