RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 HTRA2O43464 458 aaPredicted RBP10.25□□□□□ -0.77
LDLR-214ENST00000560628 CPP00450 1065 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 GYPCP04921 128 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 CTPS1P17812 591 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 CR2P20023 1033 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 IL4RP24394 825 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 CCL7P80098 99 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 SLC25A11Q02978 314 aaKnown RBP10.25□□□□□ -0.77
LDLR-214ENST00000560628 ITKQ08881 620 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 TRAF2Q12933 501 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 MARC1Q5VT66 337 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 PNCKQ6P2M8 343 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 LVRNQ6Q4G3 990 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 TAF8Q7Z7C8 310 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 GKN2Q86XP6 184 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 SFTPA2Q8IWL1 248 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 SPACA3Q8IXA5 215 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 LSMEM2Q8N112 164 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 BBS5Q8N3I7 341 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 ARL10Q8N8L6 244 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 NIPA2Q8N8Q9 360 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 Q8N9G6 341 aaPredicted RBP10.25□□□□□ -0.77
LDLR-214ENST00000560628 FAM46DQ8NEK8 389 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 OR56A4Q8NGH8 313 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 LRRN4Q8WUT4 740 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 NSMCE1Q8WV22 266 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 TEKT4Q8WW24 435 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 NAT6Q93015 286 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 CCDC74AQ96AQ1 378 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 COQ10AQ96MF6 247 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 ZNF578Q96N58 590 aaPredicted RBP10.25□□□□□ -0.77
LDLR-214ENST00000560628 LGMNQ99538 433 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 TMEM168Q9H0V1 697 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 PRORYQ9H606 182 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 CYP4F12Q9HCS2 524 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 FGF22Q9HCT0 170 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 NT5MQ9NPB1 228 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 RABGEF1Q9UJ41 708 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 RP1P56715 2156 aa10.25□□□□□ -0.77
LDLR-214ENST00000560628 GOLGA6CA6NDK9 693 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 GOLGA6BA6NDN3 693 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 EIF4E1BA6NMX2 242 aaKnown RBP10.24□□□□□ -0.77
LDLR-214ENST00000560628 AGRPO00253 132 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 HEXIM1O94992 359 aaKnown RBP10.24□□□□□ -0.77
LDLR-214ENST00000560628 MAP3K6O95382 1288 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 GOLGA6DP0CG33 693 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 RBMS1P29558 406 aaKnown RBP10.24□□□□□ -0.77
LDLR-214ENST00000560628 CASP14P31944 242 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 VIPR1P32241 457 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 SERPINB6P35237 376 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 TRIM23P36406 574 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 HSPA9P38646 679 aaKnown RBP10.24□□□□□ -0.77
LDLR-214ENST00000560628 ETV3P41162 512 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 MMP13P45452 471 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 KIAA1024LP59773 190 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 TLE3Q04726 772 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 SPIDRQ14159 915 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 CNGA3Q16281 694 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 HADHQ16836 314 aaKnown RBP10.24□□□□□ -0.77
LDLR-214ENST00000560628 RFLNAQ6ZTI6 216 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 HSD11B1LQ7Z5J1 315 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 TSPAN33Q86UF1 283 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 SDR16C5Q8N3Y7 309 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 KCTD6Q8NC69 237 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 ZNF248Q8NDW4 579 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 CCL4L1Q8NHW4 92 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 ZNF564Q8TBZ8 553 aaPredicted RBP10.24□□□□□ -0.77
LDLR-214ENST00000560628 HIC2Q96JB3 615 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 FCRL3Q96P31 734 aaPredicted RBP10.24□□□□□ -0.77
LDLR-214ENST00000560628 SMIM14Q96QK8 99 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 RBM15Q96T37 977 aaKnown RBP eCLIP10.24□□□□□ -0.778e-8■■■■□ 26
LDLR-214ENST00000560628 MGME1Q9BQP7 344 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 XPO4Q9C0E2 1151 aaKnown RBP10.24□□□□□ -0.77
LDLR-214ENST00000560628 WDR26Q9H7D7 661 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 ASCL3Q9NQ33 180 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 GOLGA6AQ9NYA3 693 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 CTTNBP2NLQ9P2B4 639 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 PHTF1Q9UMS5 762 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 DGKBQ9Y6T7 804 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 LRRK1Q38SD2 2015 aa10.24□□□□□ -0.77
LDLR-214ENST00000560628 A0A1W2PQ67 120 aa10.23□□□□□ -0.77
LDLR-214ENST00000560628 NPIPB15A6NHN6 443 aaPredicted RBP10.23□□□□□ -0.77
LDLR-214ENST00000560628 NTN3O00634 580 aaPredicted RBP10.23□□□□□ -0.77
LDLR-214ENST00000560628 TNFRSF10CO14798 259 aa10.23□□□□□ -0.77
LDLR-214ENST00000560628 KLK10O43240 276 aa10.23□□□□□ -0.77
LDLR-214ENST00000560628 MFSD11O43934 449 aa10.23□□□□□ -0.77
LDLR-214ENST00000560628 SOCS5O75159 536 aa10.23□□□□□ -0.77
LDLR-214ENST00000560628 TCEA3O75764 348 aa10.23□□□□□ -0.77
LDLR-214ENST00000560628 DXOO77932 396 aaKnown RBP10.23□□□□□ -0.77
LDLR-214ENST00000560628 TNFSF15O95150 251 aa10.23□□□□□ -0.77
LDLR-214ENST00000560628 PGLSO95336 258 aa10.23□□□□□ -0.77
LDLR-214ENST00000560628 FUCA1P04066 466 aa10.23□□□□□ -0.77
LDLR-214ENST00000560628 RPLP0P05388 317 aaKnown RBP10.23□□□□□ -0.77
LDLR-214ENST00000560628 PDHA1P08559 390 aa10.23□□□□□ -0.77
LDLR-214ENST00000560628 HOXC4P09017 264 aaPredicted RBP10.23□□□□□ -0.77
LDLR-214ENST00000560628 LHCGRP22888 699 aa10.23□□□□□ -0.77
LDLR-214ENST00000560628 KELP23276 732 aa10.23□□□□□ -0.77
LDLR-214ENST00000560628 ARSEP51690 589 aa10.23□□□□□ -0.77
LDLR-214ENST00000560628 PCBP4P57723 403 aaKnown RBP10.23□□□□□ -0.77
LDLR-214ENST00000560628 TAS2R40P59535 323 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms