RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 RTL3Q8N8U3 475 aaKnown RBP10.54□□□□□ -0.72
CDC42BPB-207ENST00000560492 CCL4L1Q8NHW4 92 aa10.54□□□□□ -0.72
CDC42BPB-207ENST00000560492 JOSD2Q8TAC2 188 aa10.54□□□□□ -0.72
CDC42BPB-207ENST00000560492 ZDHHC1Q8WTX9 485 aa10.54□□□□□ -0.72
CDC42BPB-207ENST00000560492 FUBP1Q96AE4 644 aaKnown RBP10.54□□□□□ -0.72
CDC42BPB-207ENST00000560492 CCDC74BQ96LY2 380 aa10.54□□□□□ -0.72
CDC42BPB-207ENST00000560492 TAAR9Q96RI9 348 aa10.54□□□□□ -0.72
CDC42BPB-207ENST00000560492 NUDT22Q9BRQ3 303 aa10.54□□□□□ -0.72
CDC42BPB-207ENST00000560492 SELENOOQ9BVL4 669 aa10.54□□□□□ -0.72
CDC42BPB-207ENST00000560492 KLC2Q9H0B6 622 aa10.54□□□□□ -0.72
CDC42BPB-207ENST00000560492 EPN3Q9H201 632 aa10.54□□□□□ -0.72
CDC42BPB-207ENST00000560492 ADNPQ9H2P0 1102 aa10.54□□□□□ -0.72
CDC42BPB-207ENST00000560492 NDST4Q9H3R1 872 aa10.54□□□□□ -0.72
CDC42BPB-207ENST00000560492 RETREG1Q9H6L5 497 aa10.54□□□□□ -0.72
CDC42BPB-207ENST00000560492 WDR26Q9H7D7 661 aa10.54□□□□□ -0.72
CDC42BPB-207ENST00000560492 CARS2Q9HA77 564 aaKnown RBP10.54□□□□□ -0.72
CDC42BPB-207ENST00000560492 LHX3Q9UBR4 397 aa10.54□□□□□ -0.72
CDC42BPB-207ENST00000560492 ATP8A1Q9Y2Q0 1164 aa10.54□□□□□ -0.72
CDC42BPB-207ENST00000560492 MFHAS1Q9Y4C4 1052 aa10.54□□□□□ -0.72
CDC42BPB-207ENST00000560492 DGKBQ9Y6T7 804 aa10.54□□□□□ -0.72
CDC42BPB-207ENST00000560492 TLN1Q9Y490 2541 aaKnown RBP10.54□□□□□ -0.72
CDC42BPB-207ENST00000560492 NUDT21O43809 227 aaKnown RBP10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 RECQL5O94762 991 aaPredicted RBP10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 PNLIPP16233 465 aa10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 CSTF2P33240 577 aaKnown RBP eCLIP10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 MMP12P39900 470 aa10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 NOP2P46087 812 aaKnown RBP10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 YBEYP58557 167 aaPredicted RBP10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 KIAA1024LP59773 190 aa10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 ILF3Q12906 894 aaKnown RBP eCLIP10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 IGFBP7Q16270 282 aa10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 TSR1Q2NL82 804 aaKnown RBP10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 VWA3BQ502W6 1294 aa10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 ARTNQ5T4W7 220 aa10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 BRAT1Q6PJG6 821 aa10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 SLC30A9Q6PML9 568 aa10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 STRADAQ7RTN6 431 aa10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 BNIPLQ7Z465 357 aa10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 DTX1Q86Y01 620 aa10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 CAMK1DQ8IU85 385 aa10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 SLC30A5Q8TAD4 765 aa10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 ART4Q93070 314 aa10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 GSDMCQ9BYG8 508 aa10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 ATP13A3Q9H7F0 1226 aa10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 CATSPERBQ9H7T0 1116 aa10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 ZNF71Q9NQZ8 489 aaPredicted RBP10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 SEPT11Q9NVA2 429 aaKnown RBP10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 SLC39A1Q9NY26 324 aa10.53□□□□□ -0.72
CDC42BPB-207ENST00000560492 PRSS38A1L453 326 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 ANKRD62A6NC57 917 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 ZNF891A8MT65 544 aaPredicted RBP10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 PDE2AO00408 941 aaPredicted RBP10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 GFPT2O94808 682 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 KRT3P12035 628 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 GP1BBP13224 206 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 LIFP15018 202 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 DESP17661 470 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 GPD1P21695 349 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 MPSTP25325 297 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 PTPN9P43378 593 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 GNPDA1P46926 289 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 BCL2L1Q07817 233 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 SERINC3Q13530 473 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 NCAPHQ15003 741 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 SYCP1Q15431 976 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 CYTH1Q15438 398 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 PARP15Q460N3 678 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 SNAP47Q5SQN1 464 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 OGFOD3Q6PK18 319 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 ARCQ7LC44 396 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 AGBL5Q8NDL9 886 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 C9orf43Q8TAL5 461 aaPredicted RBP10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 HCAR2Q8TDS4 363 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 GPBAR1Q8TDU6 330 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 PDCD6IPQ8WUM4 868 aaKnown RBP10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 SLC20A1Q8WUM9 679 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 NKD1Q969G9 470 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 KIAA1143Q96AT1 154 aaPredicted RBP10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 AHCYL2Q96HN2 611 aaKnown RBP10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 ZNF641Q96N77 438 aaPredicted RBP10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 TUBGCP2Q9BSJ2 902 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 CINPQ9BW66 212 aaPredicted RBP10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 SLC12A9Q9BXP2 914 aa10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 GPN2Q9H9Y4 310 aaPredicted RBP10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 PHPT1Q9NRX4 125 aaPredicted RBP10.52□□□□□ -0.73
CDC42BPB-207ENST00000560492 IGHV5-10-1A0A0J9YXX1 117 aa10.51□□□□□ -0.73
CDC42BPB-207ENST00000560492 C2CD4BA6NLJ0 364 aa10.51□□□□□ -0.73
CDC42BPB-207ENST00000560492 F8VZ95 297 aa10.51□□□□□ -0.73
CDC42BPB-207ENST00000560492 J3KR12 359 aa10.51□□□□□ -0.73
CDC42BPB-207ENST00000560492 TNFRSF10CO14798 259 aa10.51□□□□□ -0.73
CDC42BPB-207ENST00000560492 HGSO14964 777 aaPredicted RBP10.51□□□□□ -0.73
CDC42BPB-207ENST00000560492 DAPK3O43293 454 aa10.51□□□□□ -0.73
CDC42BPB-207ENST00000560492 B4GAT1O43505 415 aa10.51□□□□□ -0.73
CDC42BPB-207ENST00000560492 RAD1O60671 282 aa10.51□□□□□ -0.73
CDC42BPB-207ENST00000560492 GADD45BO75293 160 aaPredicted RBP10.51□□□□□ -0.73
CDC42BPB-207ENST00000560492 PALMO75781 387 aa10.51□□□□□ -0.73
CDC42BPB-207ENST00000560492 ECEL1O95672 775 aa10.51□□□□□ -0.73
CDC42BPB-207ENST00000560492 FGF3P11487 239 aaPredicted RBP10.51□□□□□ -0.73
CDC42BPB-207ENST00000560492 CCNB1P14635 433 aa10.51□□□□□ -0.73
CDC42BPB-207ENST00000560492 UCHL3P15374 230 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms