RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 WDTC1Q8N5D0 677 aa7.14□□□□□ -1.27
USP3-210ENST00000559192 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.14□□□□□ -1.278e-6■□□□□ 9.8
USP3-210ENST00000559192 ZBTB8BQ8NAP8 495 aaPredicted RBP7.14□□□□□ -1.27
USP3-210ENST00000559192 ZFP28Q8NHY6 868 aa7.14□□□□□ -1.27
USP3-210ENST00000559192 HEXDCQ8WVB3 486 aa7.14□□□□□ -1.27
USP3-210ENST00000559192 TPD52L3Q96J77 140 aa7.14□□□□□ -1.27
USP3-210ENST00000559192 PIWIL1Q96J94 861 aaKnown RBP7.14□□□□□ -1.27
USP3-210ENST00000559192 PLEKHA8Q96JA3 519 aa7.14□□□□□ -1.27
USP3-210ENST00000559192 OXSMQ9NWU1 459 aa7.14□□□□□ -1.27
USP3-210ENST00000559192 CYTH4Q9UIA0 394 aa7.14□□□□□ -1.27
USP3-210ENST00000559192 MAFBQ9Y5Q3 323 aaPredicted RBP7.14□□□□□ -1.27
USP3-210ENST00000559192 U3KQV3 271 aa7.14□□□□□ -1.27
USP3-210ENST00000559192 KIF13AQ9H1H9 1805 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 LOC100506127A0A0U1RQW1 187 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 E7ENX8 843 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 GPR25O00155 361 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 AP2A1O95782 977 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 CLIC3O95833 236 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 PIRTP0C851 137 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 PABPC4LP0CB38 370 aaKnown RBP7.13□□□□□ -1.27
USP3-210ENST00000559192 SCRN3Q0VDG4 424 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 GK3PQ14409 553 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 ZSWIM7Q19AV6 140 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 RUNDC3AQ59EK9 446 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 SLC27A1Q6PCB7 646 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 GALNT5Q7Z7M9 940 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 TAMM41Q96BW9 452 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 FBXL20Q96IG2 436 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 SMAD5Q99717 465 aaKnown RBP7.13□□□□□ -1.27
USP3-210ENST00000559192 SEPT5Q99719 369 aaPredicted RBP7.13□□□□□ -1.27
USP3-210ENST00000559192 IMPAD1Q9NX62 359 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 SMPD3Q9NY59 655 aaPredicted RBP7.13□□□□□ -1.27
USP3-210ENST00000559192 MARF1Q9Y4F3 1742 aaKnown RBP7.13□□□□□ -1.27
USP3-210ENST00000559192 EVPLLA8MZ36 301 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 G3V2T6 193 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 ATG7O95352 703 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 SLC25A27O95847 323 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 FADS2O95864 444 aaKnown RBP7.13□□□□□ -1.27
USP3-210ENST00000559192 ALOX15P16050 662 aaPredicted RBP7.13□□□□□ -1.27
USP3-210ENST00000559192 PTPRAP18433 802 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 PTPN3P26045 913 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 GPD2P43304 727 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 RPS9P46781 194 aaKnown RBP7.13□□□□□ -1.27
USP3-210ENST00000559192 BCAP31P51572 246 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 EFEMP1Q12805 493 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 SLC25A52Q3SY17 297 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 TIGD2Q4W5G0 525 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 MARC1Q5VT66 337 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 FBXL19Q6PCT2 694 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 ARHGAP36Q6ZRI8 547 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 PQLC3Q8N755 202 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 POC5Q8NA72 575 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 CRYGNQ8WXF5 182 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 C12orf43Q96C57 262 aaKnown RBP7.13□□□□□ -1.27
USP3-210ENST00000559192 PRKD2Q9BZL6 878 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 GOLGA2P5Q9HBQ8 144 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 ENTPD7Q9NQZ7 604 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 CAPN14A8MX76 684 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 E7ESA3 106 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 IPO13O94829 963 aaKnown RBP7.13□□□□□ -1.27
USP3-210ENST00000559192 MYO1DO94832 1006 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 KCNH1O95259 989 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 NADKO95544 446 aaPredicted RBP7.13□□□□□ -1.27
USP3-210ENST00000559192 ZBTB48P10074 688 aaPredicted RBP7.13□□□□□ -1.27
USP3-210ENST00000559192 NPR3P17342 541 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 PTPN1P18031 435 aaKnown RBP7.13□□□□□ -1.27
USP3-210ENST00000559192 CDK9P50750 372 aaKnown RBP7.13□□□□□ -1.27
USP3-210ENST00000559192 LRRC74AQ0VAA2 488 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 SNX17Q15036 470 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 GPR158Q5T848 1215 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 ANKS6Q68DC2 871 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 B3GALNT2Q8NCR0 500 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 CANT1Q8WVQ1 401 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 ASB9Q96DX5 294 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 SLC47A1Q96FL8 570 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 VAT1Q99536 393 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 GPATCH1Q9BRR8 931 aaKnown RBP7.13□□□□□ -1.27
USP3-210ENST00000559192 STRA6Q9BX79 667 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 DPY30Q9C005 99 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 EPB41L1Q9H4G0 881 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 KANSL3Q9P2N6 904 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 POLG2Q9UHN1 485 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 ADAM30Q9UKF2 790 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 FZD10Q9ULW2 581 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 INVSQ9Y283 1065 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 STON1Q9Y6Q2 735 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 DOT1LQ8TEK3 1739 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 ALS2Q96Q42 1657 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 A0A0J9YVX5 310 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 C2orf81A6NN90 581 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 AZIN1O14977 448 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 ALDOAP04075 364 aaKnown RBP7.13□□□□□ -1.27
USP3-210ENST00000559192 ZNF806P0C7X5 589 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 ATXN8OSP0DMR3 200 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 ODC1P11926 461 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 MTHFRP42898 656 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 RPL26P61254 145 aaKnown RBP7.13□□□□□ -1.27
USP3-210ENST00000559192 MGAT5BQ3V5L5 792 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 PAGE2BQ5JRK9 111 aa7.13□□□□□ -1.27
USP3-210ENST00000559192 XKR5Q6UX68 686 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms