RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 SEPT14Q6ZU15 432 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 DENND5BQ6ZUT9 1274 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 HIST3H2AQ7L7L0 130 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 SERPINA11Q86U17 422 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 ARHGEF25Q86VW2 580 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 CHSY1Q86X52 802 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 METTL23Q86XA0 190 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 PALB2Q86YC2 1186 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 ARID3BQ8IVW6 561 aaPredicted RBP2.36□□□□□ -2.03
GABPB1-209ENST00000559100 DENND6AQ8IWF6 608 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 DDIASQ8IXT1 998 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 SCYL3Q8IZE3 742 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 CHCHD4Q8N4Q1 142 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 MINDY1Q8N5J2 469 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 SLC25A41Q8N5S1 370 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 ZNF713Q8N859 430 aaPredicted RBP2.36□□□□□ -2.03
GABPB1-209ENST00000559100 ARL10Q8N8L6 244 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 TDRD5Q8NAT2 981 aaKnown RBP2.36□□□□□ -2.03
GABPB1-209ENST00000559100 HJURPQ8NCD3 748 aaPredicted RBP2.36□□□□□ -2.03
GABPB1-209ENST00000559100 Q8NFD4 153 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 OR8K5Q8NH50 307 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 KIF18AQ8NI77 898 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 AFAP1L1Q8TED9 768 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 DUSP19Q8WTR2 217 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 TMEM170AQ8WVE7 144 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 TEKT4Q8WW24 435 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 MSI2Q96DH6 328 aaKnown RBP2.36□□□□□ -2.03
GABPB1-209ENST00000559100 RRNAD1Q96FB5 475 aaKnown RBP2.36□□□□□ -2.03
GABPB1-209ENST00000559100 PDLIM2Q96JY6 352 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 UROC1Q96N76 676 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 BBC3Q96PG8 261 aaPredicted RBP2.36□□□□□ -2.03
GABPB1-209ENST00000559100 SPAG5Q96R06 1193 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 FNBP1Q96RU3 617 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 CDRT15Q96T59 188 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 DESI2Q9BSY9 194 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 THUMPD3Q9BV44 507 aaKnown RBP2.36□□□□□ -2.03
GABPB1-209ENST00000559100 C1QTNF5Q9BXJ0 243 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 MRPL1Q9BYD6 325 aaKnown RBP2.36□□□□□ -2.03
GABPB1-209ENST00000559100 PDZD7Q9H5P4 517 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 DNAJC18Q9H819 358 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 MOV10Q9HCE1 1003 aaKnown RBP2.36□□□□□ -2.03
GABPB1-209ENST00000559100 ABCF3Q9NUQ8 709 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 SYBUQ9NX95 663 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 CISD1Q9NZ45 108 aaKnown RBP2.36□□□□□ -2.03
GABPB1-209ENST00000559100 CWC15Q9P013 229 aaKnown RBP2.36□□□□□ -2.03
GABPB1-209ENST00000559100 FOXJ2Q9P0K8 574 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 NDRG3Q9UGV2 375 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 TLK1Q9UKI8 766 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 CNOT11Q9UKZ1 510 aaKnown RBP2.36□□□□□ -2.03
GABPB1-209ENST00000559100 LAMP3Q9UQV4 416 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 CCL27Q9Y4X3 112 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 SNX5Q9Y5X3 404 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 POMT1Q9Y6A1 747 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 A3GALT2U3KPV4 340 aa2.36□□□□□ -2.03
GABPB1-209ENST00000559100 MST1RQ04912 1400 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.35□□□□□ -2.03
GABPB1-209ENST00000559100 C2CD4BA6NLJ0 364 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 FOXO6A8MYZ6 492 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 MGST3O14880 152 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 NEURL1O76050 574 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 RGS11O94810 467 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 ZWINTO95229 277 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 FTCDO95954 541 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 BCL10O95999 233 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 FYNP06241 537 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 MMP3P08254 477 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 CYP2A6P11509 494 aaPredicted RBP2.35□□□□□ -2.03
GABPB1-209ENST00000559100 VPREB1P12018 145 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 UNGP13051 313 aaPredicted RBP2.35□□□□□ -2.03
GABPB1-209ENST00000559100 SRD5A1P18405 259 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 TACR2P21452 398 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 ATP5DP30049 168 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 HOXA13P31271 388 aaPredicted RBP2.35□□□□□ -2.03
GABPB1-209ENST00000559100 MC5RP33032 325 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 SHMT1P34896 483 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 RYKP34925 604 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 GP5P40197 560 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 PRCPP42785 496 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 CENPAP49450 140 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 PNLIPRP2P54317 469 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 SOX10P56693 466 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 RALGDSQ12967 914 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 GRAPQ13588 217 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 BAATQ14032 418 aaPredicted RBP2.35□□□□□ -2.03
GABPB1-209ENST00000559100 MYBPC2Q14324 1141 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 IL11RAQ14626 422 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 SNAPC1Q16533 368 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 CDC37Q16543 378 aaPredicted RBP2.35□□□□□ -2.03
GABPB1-209ENST00000559100 PCGF3Q3KNV8 242 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 USP41Q3LFD5 358 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 SLC9C1Q4G0N8 1177 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 CDONQ4KMG0 1287 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 ZNF805Q5CZA5 627 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 ENTPD8Q5MY95 495 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 LRIF1Q5T3J3 769 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 C6orf163Q5TEZ5 329 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 CST9LP1Q5W188 147 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 KRT39Q6A163 491 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 ISM2Q6H9L7 571 aa2.35□□□□□ -2.03
GABPB1-209ENST00000559100 CAVIN1Q6NZI2 390 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms