RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 VIPR1P32241 457 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 CETN2P41208 172 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 CTSKP43235 329 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 KCNJ1P48048 391 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 GRIA4P48058 902 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 RACK1P63244 317 aaKnown RBP11.47□□□□□ -0.57
SNX1-204ENST00000559061 FAM193AP78312 1265 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 PTSQ03393 145 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 ELP6Q0PNE2 266 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 AGERQ15109 404 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 IRF4Q15306 451 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 CCNG2Q16589 344 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 CYP1B1Q16678 543 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 DUOXA1Q1HG43 343 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 KIF19Q2TAC6 998 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 SETMARQ53H47 684 aaPredicted RBP11.47□□□□□ -0.57
SNX1-204ENST00000559061 SYCP2LQ5T4T6 812 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 LRRC66Q68CR7 880 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 DENND5AQ6IQ26 1287 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 KDELC2Q7Z4H8 507 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 TECPR1Q7Z6L1 1165 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 CREG2Q8IUH2 290 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 KIAA2013Q8IYS2 634 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 PLA2G15Q8NCC3 412 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 ACTRT1Q8TDG2 376 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 ASB12Q8WXK4 309 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 FEM1CQ96JP0 617 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 PBKQ96KB5 322 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 LENG8Q96PV6 779 aaPredicted RBP11.47□□□□□ -0.57
SNX1-204ENST00000559061 AP1M1Q9BXS5 423 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 RSPH14Q9UHP6 348 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 TRHDEQ9UKU6 1024 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 DMTF1Q9Y222 760 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 NEU2Q9Y3R4 380 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 SNX11Q9Y5W9 270 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 KNL1Q8NG31 2342 aa11.47□□□□□ -0.57
SNX1-204ENST00000559061 ASCC3Q8N3C0 2202 aaKnown RBP11.46□□□□□ -0.57
SNX1-204ENST00000559061 CFAP69A5D8W1 941 aa11.46□□□□□ -0.57
SNX1-204ENST00000559061 GOLGA8CPA6NN73 597 aa11.46□□□□□ -0.57
SNX1-204ENST00000559061 ANKRD66B4E2M5 251 aa11.46□□□□□ -0.57
SNX1-204ENST00000559061 PRAMEF26H0Y7S4 382 aa11.46□□□□□ -0.57
SNX1-204ENST00000559061 CES2O00748 559 aa11.46□□□□□ -0.57
SNX1-204ENST00000559061 VILLO15195 856 aa11.46□□□□□ -0.57
SNX1-204ENST00000559061 OPHN1O60890 802 aa11.46□□□□□ -0.57
SNX1-204ENST00000559061 RECQL5O94762 991 aaPredicted RBP11.46□□□□□ -0.57
SNX1-204ENST00000559061 AGTP01019 485 aa11.46□□□□□ -0.57
SNX1-204ENST00000559061 CFIP05156 583 aa11.46□□□□□ -0.57
SNX1-204ENST00000559061 HNRNPA2B1P22626 353 aaKnown RBP11.46□□□□□ -0.57
SNX1-204ENST00000559061 STC1P52823 247 aa11.46□□□□□ -0.57
SNX1-204ENST00000559061 NXPH1P58417 271 aa11.46□□□□□ -0.57
SNX1-204ENST00000559061 PFN3P60673 137 aa11.46□□□□□ -0.57
SNX1-204ENST00000559061 RPL26P61254 145 aaKnown RBP11.46□□□□□ -0.57
SNX1-204ENST00000559061 CDK18Q07002 472 aa11.46□□□□□ -0.57
SNX1-204ENST00000559061 SPARCL1Q14515 664 aa11.46□□□□□ -0.57
SNX1-204ENST00000559061 LONRF2Q1L5Z9 754 aa11.46□□□□□ -0.57
SNX1-204ENST00000559061 SIRPB2Q5JXA9 342 aa11.46□□□□□ -0.57
SNX1-204ENST00000559061 CFAP58Q5T655 872 aa11.46□□□□□ -0.57
SNX1-204ENST00000559061 ERAP2Q6P179 960 aa11.46□□□□□ -0.57
SNX1-204ENST00000559061 C12orf50Q8NA57 414 aaPredicted RBP11.46□□□□□ -0.57
SNX1-204ENST00000559061 OR13H1Q8NG92 308 aa11.46□□□□□ -0.57
SNX1-204ENST00000559061 CXorf40AQ8TE69 158 aa11.46□□□□□ -0.57
SNX1-204ENST00000559061 FRMD8P1Q9BZ68 369 aaPredicted RBP11.46□□□□□ -0.57
SNX1-204ENST00000559061 FAM153AQ9UHL3 310 aa11.46□□□□□ -0.57
SNX1-204ENST00000559061 SLC6A14Q9UN76 642 aa11.46□□□□□ -0.57
SNX1-204ENST00000559061 RPL26L1Q9UNX3 145 aaKnown RBP11.46□□□□□ -0.57
SNX1-204ENST00000559061 FNDC3AQ9Y2H6 1198 aaKnown RBP11.46□□□□□ -0.57
SNX1-204ENST00000559061 ZKSCAN5Q9Y2L8 839 aa11.46□□□□□ -0.57
SNX1-204ENST00000559061 SPEGQ15772 3267 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 CEP250Q9BV73 2442 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 A0A1W2PQ67 120 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 NEMP1O14524 444 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 ARHGAP33O14559 1287 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 KHNYNO15037 678 aaKnown RBP11.45□□□□□ -0.58
SNX1-204ENST00000559061 TM7SF2O76062 418 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 CLDN7O95471 211 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 NDST3O95803 873 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 CD38P28907 300 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 RPL22P35268 128 aaKnown RBP11.45□□□□□ -0.58
SNX1-204ENST00000559061 ETV3P41162 512 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 AFF3P51826 1226 aaKnown RBP11.45□□□□□ -0.58
SNX1-204ENST00000559061 CCDC15Q0P6D6 951 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 MPP3Q13368 585 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 SLC1A5Q15758 541 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 P3H1Q32P28 736 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 RANBP10Q6VN20 620 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 KYAT3Q6YP21 454 aaKnown RBP11.45□□□□□ -0.58
SNX1-204ENST00000559061 Q6ZVL8 140 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 LYSMD3Q7Z3D4 306 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 TTC30BQ8N4P2 665 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 TAB3Q8N5C8 712 aaPredicted RBP11.45□□□□□ -0.58
SNX1-204ENST00000559061 MFSD2AQ8NA29 543 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 DENND6BQ8NEG7 585 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 IPMKQ8NFU5 416 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 CEP76Q8TAP6 659 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 DTD2Q96FN9 168 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 AGAP2Q99490 1192 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 NAPGQ99747 312 aaPredicted RBP11.45□□□□□ -0.58
SNX1-204ENST00000559061 HINFPQ9BQA5 517 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 APOL2Q9BQE5 337 aa11.45□□□□□ -0.58
SNX1-204ENST00000559061 EDEM2Q9BV94 578 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms