RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 ELFN1P0C7U0 828 aa13.88□□□□□ -0.19
TSPAN3-205ENST00000558745 PTPN7P35236 360 aa13.88□□□□□ -0.19
TSPAN3-205ENST00000558745 NOVA1P51513 510 aaKnown RBP13.88□□□□□ -0.19
TSPAN3-205ENST00000558745 ACOX1Q15067 660 aa13.88□□□□□ -0.19
TSPAN3-205ENST00000558745 NOMO1Q15155 1222 aa13.88□□□□□ -0.19
TSPAN3-205ENST00000558745 IRF4Q15306 451 aa13.88□□□□□ -0.19
TSPAN3-205ENST00000558745 CNGA3Q16281 694 aa13.88□□□□□ -0.19
TSPAN3-205ENST00000558745 PCSK7Q16549 785 aa13.88□□□□□ -0.19
TSPAN3-205ENST00000558745 CRTC1Q6UUV9 634 aa13.88□□□□□ -0.19
TSPAN3-205ENST00000558745 PID1Q7Z2X4 250 aa13.88□□□□□ -0.19
TSPAN3-205ENST00000558745 HSD11B1LQ7Z5J1 315 aa13.88□□□□□ -0.19
TSPAN3-205ENST00000558745 IQCHQ86VS3 1027 aa13.88□□□□□ -0.19
TSPAN3-205ENST00000558745 ZNF567Q8N184 647 aa13.88□□□□□ -0.19
TSPAN3-205ENST00000558745 HTR3CQ8WXA8 447 aa13.88□□□□□ -0.19
TSPAN3-205ENST00000558745 ASB12Q8WXK4 309 aa13.88□□□□□ -0.19
TSPAN3-205ENST00000558745 SCRN2Q96FV2 425 aa13.88□□□□□ -0.19
TSPAN3-205ENST00000558745 IMP4Q96G21 291 aaKnown RBP13.88□□□□□ -0.19
TSPAN3-205ENST00000558745 TEKT5Q96M29 485 aa13.88□□□□□ -0.19
TSPAN3-205ENST00000558745 QKIQ96PU8 341 aaKnown RBP eCLIP13.88□□□□□ -0.193e-6■□□□□ 10.1
TSPAN3-205ENST00000558745 PCDH9Q9HC56 1237 aa13.88□□□□□ -0.19
TSPAN3-205ENST00000558745 PNMA8BQ9ULN7 279 aaPredicted RBP13.88□□□□□ -0.19
TSPAN3-205ENST00000558745 R3HDM2Q9Y2K5 976 aaKnown RBP13.88□□□□□ -0.19
TSPAN3-205ENST00000558745 PCNX2A6NKB5 2137 aa13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 TP53BP1Q12888 1972 aaPredicted RBP13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 TDRD6O60522 2096 aaKnown RBP13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 A6NNZ2 444 aa13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 HEXIM1O94992 359 aaKnown RBP13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 NFKB1P19838 968 aa13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 CES1P23141 567 aa13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 VIPR1P32241 457 aa13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 EIF3EP60228 445 aaKnown RBP13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 PDE1CQ14123 709 aaPredicted RBP13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 FZD2Q14332 565 aa13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 GALNT3Q14435 633 aa13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 INPP5AQ14642 412 aa13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 LRRC14Q15048 493 aa13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 QPCTQ16769 361 aa13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 MEI1Q5TIA1 1274 aa13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 ZNF662Q6ZS27 426 aa13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 NAXDQ8IW45 347 aa13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 CBARPQ8N350 705 aaPredicted RBP13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 COQ10AQ96MF6 247 aa13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 SLC25A51Q9H1U9 297 aa13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 KLHL8Q9P2G9 620 aaPredicted RBP13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 CD84Q9UIB8 345 aa13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 KLF15Q9UIH9 416 aa13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 EFR3BQ9Y2G0 817 aa13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 PPIL1Q9Y3C6 166 aa13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 OR1A2Q9Y585 309 aa13.87□□□□□ -0.19
TSPAN3-205ENST00000558745 A0A0J9YYE9 177 aa13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 A0A1W2PQ67 120 aa13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 K7ESM1 405 aa13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 SCAMP1O15126 338 aa13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 PMPCBO75439 489 aa13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 TJP3O95049 919 aa13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 CLDN7O95471 211 aa13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 TRBC1P01850 177 aa13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 PTMAP06454 111 aaKnown RBP13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 PIRTP0C851 137 aa13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 RBP3P10745 1247 aa13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 CYP2A6P11509 494 aaPredicted RBP13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 CSRP1P21291 193 aaKnown RBP13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 ETV3P41162 512 aa13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 CETN2P41208 172 aa13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 CCT8P50990 548 aa13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 EPHB1P54762 984 aa13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 PFN3P60673 137 aa13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 PTSQ03393 145 aa13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 OVGP1Q12889 678 aa13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 SLC14A1Q13336 389 aa13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 N4BP2L1Q5TBK1 243 aaPredicted RBP13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 DARS2Q6PI48 645 aaKnown RBP13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 KYAT3Q6YP21 454 aaKnown RBP13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 DBX2Q6ZNG2 339 aa13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 REXO1L1PQ8IX06 675 aa13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 RHBDD1Q8TEB9 315 aa13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 SAP25Q8TEE9 199 aa13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 SPOCK2Q92563 424 aa13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 MCCC1Q96RQ3 725 aaPredicted RBP13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 TCEAL2Q9H3H9 227 aaPredicted RBP13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 UCKL1Q9NWZ5 548 aa13.86□□□□□ -0.19
TSPAN3-205ENST00000558745 HACD1B0YJ81 288 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 KCNN4O15554 427 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 NRDCO43847 1150 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 MAGEC1O60732 1142 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 CBFA2T3O75081 653 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 ITGAVP06756 1048 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 C1SP09871 688 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 ZNF883P0CG24 379 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 EPHA8P29322 1005 aaPredicted RBP13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 RABIFP47224 123 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 RXRGP48443 463 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 EIF2B5Q13144 721 aaKnown RBP13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 KLF1Q13351 362 aaPredicted RBP13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 XRCC4Q13426 336 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 RPS6KA1Q15418 735 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 CDKN3Q16667 212 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 LRRC66Q68CR7 880 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 KCTD16Q68DU8 428 aa13.85□□□□□ -0.19
TSPAN3-205ENST00000558745 Q6ZVL8 140 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms