RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 FAM90A22PA8MWA6 464 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 FAM90A12PA8MX19 464 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 FAM90A23PA8MXZ1 464 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 OGG1O15527 345 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 FAM20BO75063 409 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 RAD51DO75771 328 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 HEXIM1O94992 359 aaKnown RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 GGPS1O95749 300 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 PNPP00491 289 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 PLAUP00749 431 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 ADAP00813 363 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 C9P02748 559 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 ELANEP08246 267 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 SAGP10523 405 aaPredicted RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 AKR1B1P15121 316 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 CTPS1P17812 591 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 PON1P27169 355 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 CD38P28907 300 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 PCGF2P35227 344 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 RFC1P35251 1148 aaPredicted RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 STAT6P42226 847 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 TUBP50607 506 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 EEF1A1P68104 462 aaKnown RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 ID2Q02363 134 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 ALCAMQ13740 583 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 SCARB2Q14108 478 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 ARHGEF6Q15052 776 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 ASPRV1Q53RT3 343 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 RARS2Q5T160 578 aaKnown RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 EEF1A1P5Q5VTE0 462 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 ZDHHC20Q5W0Z9 365 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 MTFR2Q6P444 385 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 KCTD18Q6PI47 426 aaPredicted RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 SLC30A9Q6PML9 568 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 TSSK4Q6SA08 328 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 MOXD1Q6UVY6 613 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 C11orf57Q6ZUT1 292 aaPredicted RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 PLEKHM3Q6ZWE6 761 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 LIMS2Q7Z4I7 341 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 MRGPRGQ86SM5 289 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 MRGPREQ86SM8 312 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 SERPINA11Q86U17 422 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 TBC1D26Q86UD7 250 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 GUF1Q8N442 669 aaKnown RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 SRBD1Q8N5C6 995 aaKnown RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 SLC25A41Q8N5S1 370 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 METTL25Q8N6Q8 603 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 RBM15BQ8NDT2 890 aaKnown RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 SETD9Q8NE22 299 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 PRSS3P2Q8NHM4 247 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 MSI2Q96DH6 328 aaKnown RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 ZC3HAV1LQ96H79 300 aaKnown RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 GPR78Q96P69 363 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 PHF7Q9BWX1 381 aaPredicted RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 ITPAQ9BY32 194 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 HRH4Q9H3N8 390 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 CHMP1AQ9HD42 196 aaPredicted RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 TXNRD2Q9NNW7 524 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 SH3BP4Q9P0V3 963 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 ANKFY1Q9P2R3 1169 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 TUBE1Q9UJT0 475 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 VPS4AQ9UN37 437 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 MTF2Q9Y483 593 aaPredicted RBP1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 WDR90Q96KV7 1748 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 IFT172Q9UG01 1749 aa1.39□□□□□ -2.19
CTDSPL2-202ENST00000558373 TRBC2A0A5B9 178 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 FOXO6A8MYZ6 492 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 CTDSP2O14595 271 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 WNT9BO14905 357 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 SEC14L5O43304 696 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 SYNCRIPO60506 623 aaKnown RBP1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 TLR2O60603 784 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 RAMP2O60895 175 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 CAVIN2O95810 425 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 DDAH2O95865 285 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 GCP02774 474 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 RFPL3SP0C7P2 107 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 FDPSP14324 419 aaKnown RBP1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 PORP16435 677 aaPredicted RBP1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 CASTP20810 708 aaKnown RBP1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 CDC25AP30304 524 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 HSD17B3P37058 310 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 GDF5P43026 501 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 ASCL1P50553 236 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 SNU13P55769 128 aaKnown RBP1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 CTSWP56202 376 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 ZP1P60852 638 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 NHLH1Q02575 133 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 PRKCZQ05513 592 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 SRSF1Q07955 248 aaKnown RBP eCLIP1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 FRG1Q14331 258 aaKnown RBP1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 PTPRCAPQ14761 206 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 KYNUQ16719 465 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 SLC9B1Q4ZJI4 515 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 LIN54Q6MZP7 749 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 C17orf99Q6UX52 265 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 RAPH1Q70E73 1250 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 DET1Q7L5Y6 550 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 GALNTL5Q7Z4T8 443 aa1.38□□□□□ -2.19
CTDSPL2-202ENST00000558373 PIM3Q86V86 326 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms