RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 RFX5P48382 616 aaPredicted RBP13.99□□□□□ -0.17
SPG11-210ENST00000558319 ARHGAP8P85298 464 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 FRMD7Q6ZUT3 714 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 USP45Q70EL2 814 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 EIF1ADQ8N9N8 165 aaKnown RBP13.99□□□□□ -0.17
SPG11-210ENST00000558319 TRNT1Q96Q11 434 aaKnown RBP13.99□□□□□ -0.17
SPG11-210ENST00000558319 TMEM216Q9P0N5 145 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 TMX2Q9Y320 296 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 TRPV2Q9Y5S1 764 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 ZW10O43264 779 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 UNC5AQ6ZN44 842 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 AGMOQ6ZNB7 445 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 TRIM74Q86UV6 250 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 TRIM73Q86UV7 250 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 C11orf24Q96F05 449 aaPredicted RBP13.99□□□□□ -0.17
SPG11-210ENST00000558319 MSRAQ9UJ68 235 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 ZMYM2Q9UBW7 1377 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 A0A1W2PPM1 405 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 DHFRP00374 187 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 UGT2B15P54855 530 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 PLET1Q6UQ28 207 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 GK5Q6ZS86 529 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 CCDC36Q8IYA8 594 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 OR52K2Q8NGK3 314 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 C17orf50Q8WW18 174 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 GOLGA2P5Q9HBQ8 144 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 PRELID1Q9Y255 219 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.99□□□□□ -0.17
SPG11-210ENST00000558319 MYO3AQ8NEV4 1616 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 TBC1D3DA0A087WVF3 549 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 TBC1D3IA0A087WXS9 549 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 TBC1D3EA0A087X179 549 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 TBC1D3KA0A087X1G2 549 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 TBC1D3FA6NER0 549 aaPredicted RBP13.99□□□□□ -0.17
SPG11-210ENST00000558319 TBC1D3LB9A6J9 549 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 TOR1BO14657 336 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 LGALS2P05162 132 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 TBC1D3HP0C7X1 549 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 AKR1A1P14550 325 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 SHMT1P34896 483 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 MXD1Q05195 221 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 C1QBPQ07021 282 aaKnown RBP13.99□□□□□ -0.17
SPG11-210ENST00000558319 XKR6Q5GH73 641 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 TBC1D3GQ6DHY5 549 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 TBC1D3CQ6IPX1 549 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 CES5AQ6NT32 575 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 PACS1Q6VY07 963 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 TBC1D3Q8IZP1 549 aaPredicted RBP13.99□□□□□ -0.17
SPG11-210ENST00000558319 ZNF615Q8N8J6 731 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 TMLHEQ9NVH6 421 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 MAFFQ9ULX9 164 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 SPEF1Q9Y4P9 236 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 SUZ12Q15022 739 aaKnown RBP13.99□□□□□ -0.17
SPG11-210ENST00000558319 TCEAL5Q5H9L2 206 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 SLC9A4Q6AI14 798 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 RETSATQ6NUM9 610 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 PSRC1Q6PGN9 363 aaPredicted RBP13.99□□□□□ -0.17
SPG11-210ENST00000558319 APTXQ7Z2E3 356 aaKnown RBP13.99□□□□□ -0.17
SPG11-210ENST00000558319 SPPL2CQ8IUH8 684 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 DEPDC4Q8N2C3 294 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 GHDCQ8N2G8 530 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 LNX2Q8N448 690 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 RACGAP1Q9H0H5 632 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 TRIT1Q9H3H1 467 aaKnown RBP13.99□□□□□ -0.17
SPG11-210ENST00000558319 EXD2Q9NVH0 621 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 CACNG4Q9UBN1 327 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 SNX7Q9UNH6 387 aa13.99□□□□□ -0.17
SPG11-210ENST00000558319 OAS3Q9Y6K5 1087 aaKnown RBP13.99□□□□□ -0.17
SPG11-210ENST00000558319 TRAV19A0A0A6YYK7 116 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 CYP1A1P04798 512 aaPredicted RBP13.98□□□□□ -0.17
SPG11-210ENST00000558319 PRKAR2AP13861 404 aaKnown RBP13.98□□□□□ -0.17
SPG11-210ENST00000558319 HGFP14210 728 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 PTPRAP18433 802 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 BUD31P41223 144 aaPredicted RBP13.98□□□□□ -0.17
SPG11-210ENST00000558319 BNC1Q01954 994 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 ST3GAL1Q11201 340 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 CAMK1Q14012 370 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 GRB14Q14449 540 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 C6orf183Q5T699 404 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 C7orf57Q8NEG2 295 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 KAT2AQ92830 837 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 KLK6Q92876 244 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 CEP295NLQ96MC4 621 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 MED28Q9H204 178 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 IMP3Q9NV31 184 aaKnown RBP13.98□□□□□ -0.17
SPG11-210ENST00000558319 ARHGEF5Q12774 1597 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 RBMXL2O75526 392 aaKnown RBP13.98□□□□□ -0.17
SPG11-210ENST00000558319 SLC25A12O75746 678 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 SERPINA6P08185 405 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 ITPKBP27987 946 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 CDK9P50750 372 aaKnown RBP13.98□□□□□ -0.17
SPG11-210ENST00000558319 CA9Q16790 459 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.98□□□□□ -0.17
SPG11-210ENST00000558319 PIK3R6Q5UE93 754 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 NRSN1Q8IZ57 195 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 ZNF366Q8N895 744 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 GAL3ST1Q99999 423 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 OR12D3Q9UGF7 316 aa13.98□□□□□ -0.17
SPG11-210ENST00000558319 LEF1Q9UJU2 399 aaPredicted RBP13.98□□□□□ -0.17
SPG11-210ENST00000558319 A0A087X0B3 334 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms