RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 LRRC63Q05C16 580 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 EIF3IQ13347 325 aaKnown RBP5.93□□□□□ -1.46
VPS33B-207ENST00000557470 PNOCQ13519 176 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 CLCA4Q14CN2 919 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 MLC1Q15049 377 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 GFOD2Q3B7J2 385 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 COBLL1Q53SF7 1204 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 ARTNQ5T4W7 220 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 FAXCQ5TGI0 409 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 ESRP1Q6NXG1 681 aaKnown RBP5.93□□□□□ -1.46
VPS33B-207ENST00000557470 OLFML1Q6UWY5 402 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 SETD3Q86TU7 594 aaPredicted RBP5.93□□□□□ -1.46
VPS33B-207ENST00000557470 VPS36Q86VN1 386 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 ZFAND4Q86XD8 727 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 SDR16C5Q8N3Y7 309 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 ARL10Q8N8L6 244 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 DENND6BQ8NEG7 585 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 OR7D4Q8NG98 312 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 PCDH19Q8TAB3 1148 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 BTN2A2Q8WVV5 523 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 ZNF606Q8WXB4 792 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 CENPTQ96BT3 561 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 TBATAQ96M53 351 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 GFM1Q96RP9 751 aaKnown RBP5.93□□□□□ -1.46
VPS33B-207ENST00000557470 SEMA3CQ99985 751 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 HEPHQ9BQS7 1158 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 FUCA2Q9BTY2 467 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 KRTAP4-6Q9BYQ5 205 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 CPEB1Q9BZB8 566 aaKnown RBP5.93□□□□□ -1.46
VPS33B-207ENST00000557470 ASPSCR1Q9BZE9 553 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 SLC13A1Q9BZW2 595 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 STRADBQ9C0K7 418 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 SLC25A18Q9H1K4 315 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 ZDHHC6Q9H6R6 413 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 PIGVQ9NUD9 493 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 ASNSD1Q9NWL6 643 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 MPP6Q9NZW5 540 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 FOXJ2Q9P0K8 574 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 GULP1Q9UBP9 304 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 PISDQ9UG56 409 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 TAGLN3Q9UI15 199 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 PPT2Q9UMR5 302 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 LOXL2Q9Y4K0 774 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 ACTL7AQ9Y615 435 aa5.93□□□□□ -1.46
VPS33B-207ENST00000557470 A0A1W2PQ27 194 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 A0A1W2PQ64 194 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 C16orf96A6NNT2 1141 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 TMX2-CTNND1H3BSU7 103 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 M0QYT0 321 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 NEMP1O14524 444 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 P4HA2O15460 535 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 THAP12O43422 761 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 TNFRSF21O75509 655 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 DAB1O75553 588 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 PROCP04070 461 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 ERBB2P04626 1255 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 PTMAP06454 111 aaKnown RBP5.92□□□□□ -1.46
VPS33B-207ENST00000557470 GLI1P08151 1106 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 JMJD7P0C870 316 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 GP1BBP13224 206 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 CPEP16870 476 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 ITIH1P19827 911 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 ADH6P28332 368 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 OR1E1P30953 314 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 GKP32189 559 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 CCKBRP32239 447 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 ETV5P41161 510 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 GIPRP48546 466 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 KRT85P78386 507 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 ARF5P84085 180 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 PPARDQ03181 441 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 CETN1Q12798 172 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 MTA1Q13330 715 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 PTK2BQ14289 1009 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 CCDC40Q4G0X9 1142 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 CARD16Q5EG05 197 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 LRRC73Q5JTD7 316 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 EFHC1Q5JVL4 640 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 SNAP47Q5SQN1 464 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 MANEAQ5SRI9 462 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 ZNF658Q5TYW1 1059 aaPredicted RBP5.92□□□□□ -1.46
VPS33B-207ENST00000557470 ICE2Q659A1 982 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 NXNQ6DKJ4 435 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 CCDC70Q6NSX1 233 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 MACC1Q6ZN28 852 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 FAM183BPQ6ZVS7 135 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 CHSY3Q70JA7 882 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 SPATC1Q76KD6 591 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 ZSCAN30Q86W11 494 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 PTRH1Q86Y79 214 aaKnown RBP5.92□□□□□ -1.46
VPS33B-207ENST00000557470 TREML1Q86YW5 311 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 PASD1Q8IV76 773 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 WDTC1Q8N5D0 677 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 PCDH20Q8N6Y1 951 aaKnown RBP5.92□□□□□ -1.46
VPS33B-207ENST00000557470 C1orf131Q8NDD1 294 aaKnown RBP5.92□□□□□ -1.46
VPS33B-207ENST00000557470 OR6P1Q8NGX9 317 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 OR6K2Q8NGY2 324 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 ASB12Q8WXK4 309 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 VOPP1Q96AW1 172 aa5.92□□□□□ -1.46
VPS33B-207ENST00000557470 HSH2DQ96JZ2 352 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms