RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 LRRK1Q38SD2 2015 aa15.95■□□□□ 0.14
TUBB3-213ENST00000557262 COL27A1Q8IZC6 1860 aaPredicted RBP15.95■□□□□ 0.14
TUBB3-213ENST00000557262 TNFSF15O95150 251 aa15.94■□□□□ 0.14
TUBB3-213ENST00000557262 GM2AP17900 193 aa15.94■□□□□ 0.14
TUBB3-213ENST00000557262 IL1R2P27930 398 aa15.94■□□□□ 0.14
TUBB3-213ENST00000557262 HSPA9P38646 679 aaKnown RBP15.94■□□□□ 0.14
TUBB3-213ENST00000557262 ZNF165P49910 485 aa15.94■□□□□ 0.14
TUBB3-213ENST00000557262 PDX1P52945 283 aa15.94■□□□□ 0.14
TUBB3-213ENST00000557262 RHDQ02161 417 aa15.94■□□□□ 0.14
TUBB3-213ENST00000557262 NR1I3Q14994 352 aa15.94■□□□□ 0.14
TUBB3-213ENST00000557262 ACOX1Q15067 660 aa15.94■□□□□ 0.14
TUBB3-213ENST00000557262 DPYSL2Q16555 572 aa15.94■□□□□ 0.14
TUBB3-213ENST00000557262 ARHGAP40Q5TG30 622 aa15.94■□□□□ 0.14
TUBB3-213ENST00000557262 KCTD16Q68DU8 428 aa15.94■□□□□ 0.14
TUBB3-213ENST00000557262 PNCKQ6P2M8 343 aa15.94■□□□□ 0.14
TUBB3-213ENST00000557262 POLNQ7Z5Q5 900 aa15.94■□□□□ 0.14
TUBB3-213ENST00000557262 FAM46DQ8NEK8 389 aa15.94■□□□□ 0.14
TUBB3-213ENST00000557262 OR1E3Q8WZA6 343 aa15.94■□□□□ 0.14
TUBB3-213ENST00000557262 SPOCK2Q92563 424 aa15.94■□□□□ 0.14
TUBB3-213ENST00000557262 PDXPQ96GD0 296 aa15.94■□□□□ 0.14
TUBB3-213ENST00000557262 LIN37Q96GY3 246 aaPredicted RBP15.94■□□□□ 0.14
TUBB3-213ENST00000557262 LRRN3Q9H3W5 708 aa15.94■□□□□ 0.14
TUBB3-213ENST00000557262 MRPL40Q9NQ50 206 aaKnown RBP15.94■□□□□ 0.14
TUBB3-213ENST00000557262 KCTD5Q9NXV2 234 aa15.94■□□□□ 0.14
TUBB3-213ENST00000557262 PCDHGC4Q9Y5F7 938 aa15.94■□□□□ 0.14
TUBB3-213ENST00000557262 A0A1W2PQM1 296 aa15.93■□□□□ 0.14
TUBB3-213ENST00000557262 TTC24A2A3L6 582 aaPredicted RBP15.93■□□□□ 0.14
TUBB3-213ENST00000557262 PMS2P1A4D2B8 440 aa15.93■□□□□ 0.14
TUBB3-213ENST00000557262 ERVH48-1M5A8F1 160 aa15.93■□□□□ 0.14
TUBB3-213ENST00000557262 PDE2AO00408 941 aaPredicted RBP15.93■□□□□ 0.14
TUBB3-213ENST00000557262 HTRA2O43464 458 aaPredicted RBP15.93■□□□□ 0.14
TUBB3-213ENST00000557262 C1QL1O75973 258 aa15.93■□□□□ 0.14
TUBB3-213ENST00000557262 CR2P20023 1033 aa15.93■□□□□ 0.14
TUBB3-213ENST00000557262 VAC14Q08AM6 782 aa15.93■□□□□ 0.14
TUBB3-213ENST00000557262 EIF3IQ13347 325 aaKnown RBP15.93■□□□□ 0.14
TUBB3-213ENST00000557262 PIGHQ14442 188 aaPredicted RBP15.93■□□□□ 0.14
TUBB3-213ENST00000557262 ZNF235Q14590 738 aa15.93■□□□□ 0.14
TUBB3-213ENST00000557262 FIGNQ5HY92 759 aa15.93■□□□□ 0.14
TUBB3-213ENST00000557262 TMCO3Q6UWJ1 677 aa15.93■□□□□ 0.14
TUBB3-213ENST00000557262 CLEC14AQ86T13 490 aa15.93■□□□□ 0.14
TUBB3-213ENST00000557262 SNRNP27Q8WVK2 155 aaKnown RBP15.93■□□□□ 0.14
TUBB3-213ENST00000557262 WBP1Q96G27 269 aa15.93■□□□□ 0.14
TUBB3-213ENST00000557262 COQ10AQ96MF6 247 aa15.93■□□□□ 0.14
TUBB3-213ENST00000557262 NUDCD1Q96RS6 583 aa15.93■□□□□ 0.14
TUBB3-213ENST00000557262 LGR4Q9BXB1 951 aa15.93■□□□□ 0.14
TUBB3-213ENST00000557262 STRADBQ9C0K7 418 aa15.93■□□□□ 0.14
TUBB3-213ENST00000557262 TMEM168Q9H0V1 697 aa15.93■□□□□ 0.14
TUBB3-213ENST00000557262 FGF22Q9HCT0 170 aa15.93■□□□□ 0.14
TUBB3-213ENST00000557262 ETNK2Q9NVF9 386 aa15.93■□□□□ 0.14
TUBB3-213ENST00000557262 B4GALT6Q9UBX8 382 aa15.93■□□□□ 0.14
TUBB3-213ENST00000557262 GCN1Q92616 2671 aaKnown RBP15.92■□□□□ 0.14
TUBB3-213ENST00000557262 ATMQ13315 3056 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 PLD2O14939 933 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 MAFKO60675 156 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 SOCS5O75159 536 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 PEX11BO96011 259 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 SERPINC1P01008 464 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 RPLP0P05388 317 aaKnown RBP15.92■□□□□ 0.14
TUBB3-213ENST00000557262 ITGA2BP08514 1039 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 RARAP10276 462 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 PNLIPP16233 465 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 GLB1P16278 677 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 NFKBIAP25963 317 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 INHBCP55103 352 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 SMTNL2Q2TAL5 461 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 TAF1BQ53T94 588 aaPredicted RBP15.92■□□□□ 0.14
TUBB3-213ENST00000557262 PCSK4Q6UW60 755 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 RAB11FIP2Q7L804 512 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 CBARPQ8N350 705 aaPredicted RBP15.92■□□□□ 0.14
TUBB3-213ENST00000557262 BBS5Q8N3I7 341 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 PGBD5Q8N414 524 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 FBXO39Q8N4B4 442 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 PDCD6IPQ8WUM4 868 aaKnown RBP15.92■□□□□ 0.14
TUBB3-213ENST00000557262 HSPH1Q92598 858 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 TMEM74Q96NL1 305 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 CSPG4P5Q96PW8 444 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 WDR26Q9H7D7 661 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 EPB41L5Q9HCM4 733 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 CYP4F12Q9HCS2 524 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 MOSPD1Q9UJG1 213 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 APPL1Q9UKG1 709 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 PHTF1Q9UMS5 762 aa15.92■□□□□ 0.14
TUBB3-213ENST00000557262 BZW2Q9Y6E2 419 aaKnown RBP15.92■□□□□ 0.14
TUBB3-213ENST00000557262 D6RAR5 112 aa15.91■□□□□ 0.14
TUBB3-213ENST00000557262 NOBOXO60393 691 aa15.91■□□□□ 0.14
TUBB3-213ENST00000557262 CYP2A6P11509 494 aaPredicted RBP15.91■□□□□ 0.14
TUBB3-213ENST00000557262 TCF4P15884 667 aa15.91■□□□□ 0.14
TUBB3-213ENST00000557262 VIPR1P32241 457 aa15.91■□□□□ 0.14
TUBB3-213ENST00000557262 UGT1A5P35504 534 aa15.91■□□□□ 0.14
TUBB3-213ENST00000557262 IQCB1Q15051 598 aa15.91■□□□□ 0.14
TUBB3-213ENST00000557262 TSR1Q2NL82 804 aaKnown RBP15.91■□□□□ 0.14
TUBB3-213ENST00000557262 RALGPS1Q5JS13 557 aa15.91■□□□□ 0.14
TUBB3-213ENST00000557262 MARC1Q5VT66 337 aa15.91■□□□□ 0.14
TUBB3-213ENST00000557262 B3GNT8Q7Z7M8 397 aa15.91■□□□□ 0.14
TUBB3-213ENST00000557262 CCNJLQ8IV13 435 aa15.91■□□□□ 0.14
TUBB3-213ENST00000557262 PELI3Q8N2H9 469 aa15.91■□□□□ 0.14
TUBB3-213ENST00000557262 Q8N9G6 341 aaPredicted RBP15.91■□□□□ 0.14
TUBB3-213ENST00000557262 NSMCE1Q8WV22 266 aa15.91■□□□□ 0.14
TUBB3-213ENST00000557262 TEKT4Q8WW24 435 aa15.91■□□□□ 0.14
TUBB3-213ENST00000557262 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms