RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 SLC44A1Q8WWI5 657 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 CENPHQ9H3R5 247 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 FBRSL1Q9HCM7 1045 aaKnown RBP23.82■■□□□ 1.4
SIX4-203ENST00000556952 SUN2Q9UH99 717 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 NDRG2Q9UN36 371 aaKnown RBP23.82■■□□□ 1.4
SIX4-203ENST00000556952 SPO11Q9Y5K1 396 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 IKBKGQ9Y6K9 419 aa23.82■■□□□ 1.4
SIX4-203ENST00000556952 C2orf81A6NN90 581 aa23.81■■□□□ 1.4
SIX4-203ENST00000556952 H3BQF6 201 aa23.81■■□□□ 1.4
SIX4-203ENST00000556952 MAN2B1O00754 1011 aa23.81■■□□□ 1.4
SIX4-203ENST00000556952 PIRTP0C851 137 aa23.81■■□□□ 1.4
SIX4-203ENST00000556952 ATP5DP30049 168 aa23.81■■□□□ 1.4
SIX4-203ENST00000556952 SLC8A1P32418 973 aa23.81■■□□□ 1.4
SIX4-203ENST00000556952 IL12RB1P42701 662 aa23.81■■□□□ 1.4
SIX4-203ENST00000556952 POLR2LP62875 67 aaKnown RBP23.81■■□□□ 1.4
SIX4-203ENST00000556952 ACVR1Q04771 509 aa23.81■■□□□ 1.4
SIX4-203ENST00000556952 ENPP2Q13822 863 aa23.81■■□□□ 1.4
SIX4-203ENST00000556952 ELAVL3Q14576 367 aaKnown RBP23.81■■□□□ 1.4
SIX4-203ENST00000556952 PON2Q15165 354 aa23.81■■□□□ 1.4
SIX4-203ENST00000556952 EGFLAMQ63HQ2 1017 aa23.81■■□□□ 1.4
SIX4-203ENST00000556952 ADGRD1Q6QNK2 874 aa23.81■■□□□ 1.4
SIX4-203ENST00000556952 RASSF3Q86WH2 238 aa23.81■■□□□ 1.4
SIX4-203ENST00000556952 ZNF687Q8N1G0 1237 aa23.81■■□□□ 1.4
SIX4-203ENST00000556952 PJA1Q8NG27 643 aa23.81■■□□□ 1.4
SIX4-203ENST00000556952 GRIN3AQ8TCU5 1115 aa23.81■■□□□ 1.4
SIX4-203ENST00000556952 OR8D1Q8WZ84 308 aa23.81■■□□□ 1.4
SIX4-203ENST00000556952 ATP6V1G3Q96LB4 118 aa23.81■■□□□ 1.4
SIX4-203ENST00000556952 SMYD2Q9NRG4 433 aa23.81■■□□□ 1.4
SIX4-203ENST00000556952 C20orf96Q9NUD7 363 aaPredicted RBP23.81■■□□□ 1.4
SIX4-203ENST00000556952 ZFATQ9P243 1243 aa23.81■■□□□ 1.4
SIX4-203ENST00000556952 PPIL1Q9Y3C6 166 aa23.81■■□□□ 1.4
SIX4-203ENST00000556952 ATG2BQ96BY7 2078 aa23.81■■□□□ 1.4
SIX4-203ENST00000556952 TSPAN11A1L157 253 aa23.8■■□□□ 1.4
SIX4-203ENST00000556952 CAPN8A6NHC0 703 aa23.8■■□□□ 1.4
SIX4-203ENST00000556952 HMGB1P1B2RPK0 211 aaPredicted RBP23.8■■□□□ 1.4
SIX4-203ENST00000556952 LEFTY1O75610 366 aa23.8■■□□□ 1.4
SIX4-203ENST00000556952 PRNPP04156 253 aa23.8■■□□□ 1.4
SIX4-203ENST00000556952 INHBAP08476 426 aa23.8■■□□□ 1.4
SIX4-203ENST00000556952 CNGA3Q16281 694 aa23.8■■□□□ 1.4
SIX4-203ENST00000556952 SKIDA1Q1XH10 827 aa23.8■■□□□ 1.4
SIX4-203ENST00000556952 TTMPQ5BVD1 217 aa23.8■■□□□ 1.4
SIX4-203ENST00000556952 C9orf64Q5T6V5 341 aa23.8■■□□□ 1.4
SIX4-203ENST00000556952 SLC26A11Q86WA9 606 aa23.8■■□□□ 1.4
SIX4-203ENST00000556952 UNC5BQ8IZJ1 945 aa23.8■■□□□ 1.4
SIX4-203ENST00000556952 PPM1NQ8N819 430 aa23.8■■□□□ 1.4
SIX4-203ENST00000556952 ZNF366Q8N895 744 aa23.8■■□□□ 1.4
SIX4-203ENST00000556952 OR13J1Q8NGT2 312 aa23.8■■□□□ 1.4
SIX4-203ENST00000556952 KCNV2Q8TDN2 545 aa23.8■■□□□ 1.4
SIX4-203ENST00000556952 ARL8AQ96BM9 186 aa23.8■■□□□ 1.4
SIX4-203ENST00000556952 KLHL32Q96NJ5 620 aa23.8■■□□□ 1.4
SIX4-203ENST00000556952 SLC2A6Q9UGQ3 507 aa23.8■■□□□ 1.4
SIX4-203ENST00000556952 ZNF180Q9UJW8 692 aa23.8■■□□□ 1.4
SIX4-203ENST00000556952 HCN2Q9UL51 889 aa23.8■■□□□ 1.4
SIX4-203ENST00000556952 ZNF711Q9Y462 761 aa23.8■■□□□ 1.4
SIX4-203ENST00000556952 ARL5AQ9Y689 179 aa23.8■■□□□ 1.4
SIX4-203ENST00000556952 CKAP5Q14008 2032 aa23.8■■□□□ 1.4
SIX4-203ENST00000556952 SCN8AQ9UQD0 1980 aa23.79■■□□□ 1.4
SIX4-203ENST00000556952 WDFY4Q6ZS81 3184 aa23.79■■□□□ 1.4
SIX4-203ENST00000556952 CCDC78A2IDD5 438 aa23.79■■□□□ 1.4
SIX4-203ENST00000556952 CXorf49A8MYA2 514 aaPredicted RBP23.79■■□□□ 1.4
SIX4-203ENST00000556952 K7EQS6 105 aa23.79■■□□□ 1.4
SIX4-203ENST00000556952 SIN3BO75182 1162 aa23.79■■□□□ 1.4
SIX4-203ENST00000556952 ERVK-10P10266 1014 aa23.79■■□□□ 1.4
SIX4-203ENST00000556952 HLA-EP13747 358 aa23.79■■□□□ 1.4
SIX4-203ENST00000556952 AOC1P19801 751 aa23.79■■□□□ 1.4
SIX4-203ENST00000556952 DRD1P21728 446 aa23.79■■□□□ 1.4
SIX4-203ENST00000556952 ARCN1P48444 511 aaKnown RBP23.79■■□□□ 1.4
SIX4-203ENST00000556952 ZNF140P52738 457 aaPredicted RBP23.79■■□□□ 1.4
SIX4-203ENST00000556952 ARSIQ5FYB1 569 aa23.79■■□□□ 1.4
SIX4-203ENST00000556952 USP45Q70EL2 814 aa23.79■■□□□ 1.4
SIX4-203ENST00000556952 ZSWIM9Q86XI8 627 aa23.79■■□□□ 1.4
SIX4-203ENST00000556952 ZNF513Q8N8E2 541 aaPredicted RBP23.79■■□□□ 1.4
SIX4-203ENST00000556952 TMEM105Q8N8V8 129 aa23.79■■□□□ 1.4
SIX4-203ENST00000556952 MDGA1Q8NFP4 955 aa23.79■■□□□ 1.4
SIX4-203ENST00000556952 GABPB2Q8TAK5 448 aaPredicted RBP23.79■■□□□ 1.4
SIX4-203ENST00000556952 DCAKDQ8WVC6 231 aa23.79■■□□□ 1.4
SIX4-203ENST00000556952 LYSMD1Q96S90 227 aa23.79■■□□□ 1.4
SIX4-203ENST00000556952 C19orf43Q9BQ61 176 aa23.79■■□□□ 1.4
SIX4-203ENST00000556952 MTG2Q9H4K7 406 aa23.79■■□□□ 1.4
SIX4-203ENST00000556952 NSMCE4AQ9NXX6 385 aa23.79■■□□□ 1.4
SIX4-203ENST00000556952 DKK3Q9UBP4 350 aa23.79■■□□□ 1.4
SIX4-203ENST00000556952 CTNNAL1Q9UBT7 734 aa23.79■■□□□ 1.4
SIX4-203ENST00000556952 ZNF106Q9H2Y7 1883 aaKnown RBP23.79■■□□□ 1.4
SIX4-203ENST00000556952 FAM170BA6NMN3 283 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 RNF40O75150 1001 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 DCNP07585 359 aaKnown RBP23.78■■□□□ 1.4
SIX4-203ENST00000556952 CTSLP07711 333 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 LPOP22079 712 aaPredicted RBP23.78■■□□□ 1.4
SIX4-203ENST00000556952 PSMA3P25788 255 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 NFKBIAP25963 317 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 FZD5Q13467 585 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 ZNF805Q5CZA5 627 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 TNFAIP8L3Q5GJ75 292 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 TMEM196Q5HYL7 178 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 KRT222Q8N1A0 295 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 TMIEQ8NEW7 156 aa23.78■■□□□ 1.4
SIX4-203ENST00000556952 MCCC1Q96RQ3 725 aaPredicted RBP23.78■■□□□ 1.4
SIX4-203ENST00000556952 NLE1Q9NVX2 485 aaPredicted RBP23.78■■□□□ 1.4
SIX4-203ENST00000556952 BCCIPQ9P287 314 aaKnown RBP eCLIP23.78■■□□□ 1.4
SIX4-203ENST00000556952 PIAS1O75925 651 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms