RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 PCDH12Q9NPG4 1184 aa11.3□□□□□ -0.6
FOXN3-212ENST00000556541 C2orf42Q9NWW7 574 aa11.3□□□□□ -0.6
FOXN3-212ENST00000556541 CEP192Q8TEP8 1941 aa11.3□□□□□ -0.6
FOXN3-212ENST00000556541 ZNF318Q5VUA4 2279 aa11.3□□□□□ -0.6
FOXN3-212ENST00000556541 FAM237BA0A1B0GVD1 139 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 A0A1W2PP55 124 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 H7C0S8 307 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 AXIN1O15169 862 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 LAMTOR5O43504 91 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 TTC4O95801 387 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 GSTA2P09210 222 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 AVPR2P30518 371 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 CNR2P34972 360 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 HNF1BP35680 557 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 GRIA1P42261 906 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 CHRNA4P43681 627 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 CCR5P51681 352 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 STC1P52823 247 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 ADPRHP54922 357 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 PLTPP55058 493 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 TAS2R38P59533 333 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 GALNT3Q14435 633 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 SPDYCQ5MJ68 293 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 ANO7Q6IWH7 933 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 ZNF449Q6P9G9 518 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 KIAA1324Q6UXG2 1013 aaKnown RBP11.29□□□□□ -0.6
FOXN3-212ENST00000556541 SLC36A4Q6YBV0 504 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 CYS1Q717R9 158 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 CENPUQ71F23 418 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 ZNF765Q7L2R6 523 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 TMC3Q7Z5M5 1100 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 TMEM135Q86UB9 458 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 ALYREFQ86V81 257 aaKnown RBP11.29□□□□□ -0.6
FOXN3-212ENST00000556541 NRSN1Q8IZ57 195 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 DNAAF3Q8N9W5 541 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 MYRIPQ8NFW9 859 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 OR2T34Q8NGX1 318 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 STYXQ8WUJ0 223 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 PDCD6IPQ8WUM4 868 aaKnown RBP11.29□□□□□ -0.6
FOXN3-212ENST00000556541 HMGB4Q8WW32 186 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 SCG3Q8WXD2 468 aaKnown RBP11.29□□□□□ -0.6
FOXN3-212ENST00000556541 HHIPQ96QV1 700 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 FMO2Q99518 471 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 C1QTNF1Q9BXJ1 281 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 BTBD1Q9H0C5 482 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 EPHX3Q9H6B9 360 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 C11orf16Q9NQ32 467 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 SPATA6Q9NWH7 488 aaPredicted RBP11.29□□□□□ -0.6
FOXN3-212ENST00000556541 WSB2Q9NYS7 404 aaPredicted RBP11.29□□□□□ -0.6
FOXN3-212ENST00000556541 BCCIPQ9P287 314 aaKnown RBP eCLIP11.29□□□□□ -0.6
FOXN3-212ENST00000556541 B4GALT6Q9UBX8 382 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 SOX13Q9UN79 622 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 ZNF711Q9Y462 761 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 TEX264Q9Y6I9 313 aa11.29□□□□□ -0.6
FOXN3-212ENST00000556541 ESYT3A0FGR9 886 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 NPIPB15A6NHN6 443 aaPredicted RBP11.28□□□□□ -0.6
FOXN3-212ENST00000556541 LRRC72A6NJI9 287 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 C2orf81A6NN90 581 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 F5H423 210 aaPredicted RBP11.28□□□□□ -0.6
FOXN3-212ENST00000556541 LATO43561 262 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 LDB2O43679 373 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 USP12O75317 370 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 RNASEH2AO75792 299 aaKnown RBP11.28□□□□□ -0.6
FOXN3-212ENST00000556541 LPOP22079 712 aaPredicted RBP11.28□□□□□ -0.6
FOXN3-212ENST00000556541 TEAD1P28347 426 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 CD6P30203 668 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 HADHAP40939 763 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 CARSP49589 748 aaKnown RBP11.28□□□□□ -0.6
FOXN3-212ENST00000556541 ZNF140P52738 457 aaPredicted RBP11.28□□□□□ -0.6
FOXN3-212ENST00000556541 METAP1P53582 386 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 RPS21P63220 83 aaKnown RBP11.28□□□□□ -0.6
FOXN3-212ENST00000556541 MRPS25P82663 173 aaKnown RBP11.28□□□□□ -0.6
FOXN3-212ENST00000556541 ARHGEF7Q14155 803 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 SPARCL1Q14515 664 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 SLMAPQ14BN4 828 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 ERCC6LQ2NKX8 1250 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 TMEM259Q4ZIN3 620 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 CCDC38Q502W7 563 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 STEAP4Q687X5 459 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 CRTC1Q6UUV9 634 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 LIPIQ6XZB0 460 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 CCNI2Q6ZMN8 369 aaPredicted RBP11.28□□□□□ -0.6
FOXN3-212ENST00000556541 LONP2Q86WA8 852 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 MAML2Q8IZL2 1156 aaPredicted RBP11.28□□□□□ -0.6
FOXN3-212ENST00000556541 TAB3Q8N5C8 712 aaPredicted RBP11.28□□□□□ -0.6
FOXN3-212ENST00000556541 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.28□□□□□ -0.6
FOXN3-212ENST00000556541 DENND6BQ8NEG7 585 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 PPHLN1Q8NEY8 458 aaKnown RBP11.28□□□□□ -0.6
FOXN3-212ENST00000556541 CADM4Q8NFZ8 388 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 SPACA7Q96KW9 195 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 PLEKHG4BQ96PX9 1271 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 LRFN3Q9BTN0 628 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 NEUROG2Q9H2A3 272 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 ZFYVE1Q9HBF4 777 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 IL17CQ9P0M4 197 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 SERGEFQ9UGK8 458 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 TCAF1Q9Y4C2 921 aa11.28□□□□□ -0.6
FOXN3-212ENST00000556541 NUMA1Q14980 2115 aa11.27□□□□□ -0.6
FOXN3-212ENST00000556541 IGHV1OR15-9A0A0B4J2B8 117 aa11.27□□□□□ -0.61
FOXN3-212ENST00000556541 RNGTTO60942 597 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms