RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.17□□□□□ -1.58
PRPF39-209ENST00000556353 J3KR12 359 aa5.17□□□□□ -1.58
PRPF39-209ENST00000556353 CLGNO14967 610 aa5.17□□□□□ -1.58
PRPF39-209ENST00000556353 DHX16O60231 1041 aaKnown RBP5.17□□□□□ -1.58
PRPF39-209ENST00000556353 PLGP00747 810 aaPredicted RBP5.17□□□□□ -1.58
PRPF39-209ENST00000556353 IGLV2-11P01706 119 aa5.17□□□□□ -1.58
PRPF39-209ENST00000556353 TTKP33981 857 aa5.17□□□□□ -1.58
PRPF39-209ENST00000556353 SLC18A3Q16572 532 aa5.17□□□□□ -1.58
PRPF39-209ENST00000556353 CALCRLQ16602 461 aa5.17□□□□□ -1.58
PRPF39-209ENST00000556353 ADCK5Q3MIX3 580 aa5.17□□□□□ -1.58
PRPF39-209ENST00000556353 OTUD3Q5T2D3 398 aaPredicted RBP5.17□□□□□ -1.58
PRPF39-209ENST00000556353 NAPEPLDQ6IQ20 393 aa5.17□□□□□ -1.58
PRPF39-209ENST00000556353 IL20RBQ6UXL0 311 aa5.17□□□□□ -1.58
PRPF39-209ENST00000556353 CCDC129Q6ZRS4 1044 aa5.17□□□□□ -1.58
PRPF39-209ENST00000556353 EXOC3L1Q86VI1 746 aa5.17□□□□□ -1.58
PRPF39-209ENST00000556353 FOXP4Q8IVH2 680 aaPredicted RBP5.17□□□□□ -1.58
PRPF39-209ENST00000556353 SFTPA2Q8IWL1 248 aa5.17□□□□□ -1.58
PRPF39-209ENST00000556353 MUC20Q8N307 709 aaPredicted RBP5.17□□□□□ -1.58
PRPF39-209ENST00000556353 MYCT1Q8N699 235 aa5.17□□□□□ -1.58
PRPF39-209ENST00000556353 ENAHQ8N8S7 591 aaPredicted RBP5.17□□□□□ -1.58
PRPF39-209ENST00000556353 SH3KBP1Q96B97 665 aa5.17□□□□□ -1.58
PRPF39-209ENST00000556353 SCMH1Q96GD3 660 aa5.17□□□□□ -1.58
PRPF39-209ENST00000556353 OR1F2PQ96R84 312 aa5.17□□□□□ -1.58
PRPF39-209ENST00000556353 DONSONQ9NYP3 566 aa5.17□□□□□ -1.58
PRPF39-209ENST00000556353 GDAQ9Y2T3 454 aa5.17□□□□□ -1.58
PRPF39-209ENST00000556353 RRP7AQ9Y3A4 280 aaKnown RBP5.17□□□□□ -1.58
PRPF39-209ENST00000556353 ALS2Q96Q42 1657 aa5.17□□□□□ -1.58
PRPF39-209ENST00000556353 WDR81Q562E7 1941 aa5.17□□□□□ -1.58
PRPF39-209ENST00000556353 PLEKHH1Q9ULM0 1364 aa5.16□□□□□ -1.58
PRPF39-209ENST00000556353 ADGRB1O14514 1584 aa5.16□□□□□ -1.58
PRPF39-209ENST00000556353 ADGRB2O60241 1585 aa5.16□□□□□ -1.58
PRPF39-209ENST00000556353 GLI3P10071 1580 aa5.16□□□□□ -1.58
PRPF39-209ENST00000556353 CDK12Q9NYV4 1490 aaPredicted RBP5.16□□□□□ -1.58
PRPF39-209ENST00000556353 ANP32CO43423 234 aa5.16□□□□□ -1.58
PRPF39-209ENST00000556353 UMODP07911 640 aa5.16□□□□□ -1.58
PRPF39-209ENST00000556353 CHRM4P08173 479 aa5.16□□□□□ -1.58
PRPF39-209ENST00000556353 IGHV4-30-4P0DP06 118 aa5.16□□□□□ -1.58
PRPF39-209ENST00000556353 ACSM2AQ08AH3 577 aa5.16□□□□□ -1.58
PRPF39-209ENST00000556353 ILF3Q12906 894 aaKnown RBP eCLIP5.16□□□□□ -1.58
PRPF39-209ENST00000556353 KRT72Q14CN4 511 aa5.16□□□□□ -1.58
PRPF39-209ENST00000556353 KIF26BQ2KJY2 2108 aa5.16□□□□□ -1.58
PRPF39-209ENST00000556353 DSTYKQ6XUX3 929 aa5.16□□□□□ -1.58
PRPF39-209ENST00000556353 POC1AQ8NBT0 407 aa5.16□□□□□ -1.58
PRPF39-209ENST00000556353 CEP70Q8NHQ1 597 aa5.16□□□□□ -1.58
PRPF39-209ENST00000556353 ERRFI1Q9UJM3 462 aaPredicted RBP5.16□□□□□ -1.58
PRPF39-209ENST00000556353 DNAJC16Q9Y2G8 782 aa5.16□□□□□ -1.58
PRPF39-209ENST00000556353 NWD2Q9ULI1 1742 aa5.16□□□□□ -1.58
PRPF39-209ENST00000556353 TOPAZ1Q8N9V7 1692 aa5.15□□□□□ -1.58
PRPF39-209ENST00000556353 BMPR1BO00238 502 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 EBAG9O00559 213 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 GAGE7O76087 117 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 GAS8-AS1O95177 125 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 AFPP02771 609 aaKnown RBP5.15□□□□□ -1.59
PRPF39-209ENST00000556353 WEE2P0C1S8 567 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 GAGE12FP0CL80 117 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 GAGE12GP0CL81 117 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 GAGE12IP0CL82 117 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 HDAC4P56524 1084 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 GAGE1Q13065 139 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 GAGE4Q13068 117 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 ANKRD45Q5TZF3 282 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 PRSS45Q7RTY3 260 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 MOGAT3Q86VF5 341 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 LURAP1LQ8IV03 231 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 NAGSQ8N159 534 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 SPATA20Q8TB22 786 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 GDPD5Q8WTR4 605 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 RILPL2Q969X0 211 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 ZNF385AQ96PM9 386 aaKnown RBP5.15□□□□□ -1.59
PRPF39-209ENST00000556353 NODALQ96S42 347 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 NOD2Q9HC29 1040 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 RASSF1Q9NS23 344 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 NDRG3Q9UGV2 375 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 RIPOR2Q9Y4F9 1068 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 ADGRF5Q8IZF2 1346 aa5.15□□□□□ -1.59
PRPF39-209ENST00000556353 hDV102S1A0JD36 115 aa5.14□□□□□ -1.59
PRPF39-209ENST00000556353 TYW5A2RUC4 315 aaKnown RBP5.14□□□□□ -1.59
PRPF39-209ENST00000556353 ATP2C2O75185 946 aa5.14□□□□□ -1.59
PRPF39-209ENST00000556353 SSTR2P30874 369 aa5.14□□□□□ -1.59
PRPF39-209ENST00000556353 EDRF1Q3B7T1 1238 aa5.14□□□□□ -1.59
PRPF39-209ENST00000556353 KRTAP24-1Q3LI83 254 aa5.14□□□□□ -1.59
PRPF39-209ENST00000556353 SETMARQ53H47 684 aaPredicted RBP5.14□□□□□ -1.59
PRPF39-209ENST00000556353 FAM69BQ5VUD6 431 aa5.14□□□□□ -1.59
PRPF39-209ENST00000556353 SHFQ7M4L6 423 aa5.14□□□□□ -1.59
PRPF39-209ENST00000556353 FTSJ3Q8IY81 847 aaKnown RBP5.14□□□□□ -1.59
PRPF39-209ENST00000556353 ARRDC2Q8TBH0 407 aa5.14□□□□□ -1.59
PRPF39-209ENST00000556353 SPPL3Q8TCT6 385 aa5.14□□□□□ -1.59
PRPF39-209ENST00000556353 CNOT9Q92600 299 aaKnown RBP5.14□□□□□ -1.59
PRPF39-209ENST00000556353 EPYCQ99645 322 aa5.14□□□□□ -1.59
PRPF39-209ENST00000556353 FEM1BQ9UK73 627 aa5.14□□□□□ -1.59
PRPF39-209ENST00000556353 ITSN1Q15811 1721 aa5.14□□□□□ -1.59
PRPF39-209ENST00000556353 CCDC144AA2RUR9 1427 aa5.14□□□□□ -1.59
PRPF39-209ENST00000556353 PHRF1Q9P1Y6 1649 aaKnown RBP5.13□□□□□ -1.59
PRPF39-209ENST00000556353 CYSRT1A8MQ03 144 aa5.13□□□□□ -1.59
PRPF39-209ENST00000556353 B9A039 149 aa5.13□□□□□ -1.59
PRPF39-209ENST00000556353 PRAC2D3DTV9 90 aa5.13□□□□□ -1.59
PRPF39-209ENST00000556353 NPIPB11E5RHQ5 1161 aa5.13□□□□□ -1.59
PRPF39-209ENST00000556353 TULP2O00295 520 aa5.13□□□□□ -1.59
PRPF39-209ENST00000556353 SOCS5O75159 536 aa5.13□□□□□ -1.59
PRPF39-209ENST00000556353 TCEA1P23193 301 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms