RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 ARMC8Q8IUR7 673 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 KIAA0319LQ8IZA0 1049 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 OFCC1Q8IZS5 231 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 OR52K1Q8NGK4 314 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 RNASE11Q8TAA1 199 aaKnown RBP10.75□□□□□ -0.69
ACTN1-216ENST00000556083 RIPOR3Q96MK2 946 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 PGLYRP2Q96PD5 576 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 NUSAP1Q9BXS6 441 aaKnown RBP10.75□□□□□ -0.69
ACTN1-216ENST00000556083 RETREG1Q9H6L5 497 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 ALG9Q9H6U8 611 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 SLC12A4Q9UP95 1085 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 UGT2B11O75310 529 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 IFNA16P05015 189 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 SRPRAP08240 638 aaKnown RBP10.75□□□□□ -0.69
ACTN1-216ENST00000556083 PRPS2P11908 318 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 PRG2P13727 222 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 WEE1P30291 646 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 C21orf59P57076 290 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 RALGPS1Q5JS13 557 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 ATAT1Q5SQI0 421 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 C9orf57Q5W0N0 161 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 MFSD5Q6N075 450 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 ABHD15Q6UXT9 468 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 COMMD2Q86X83 199 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 GATAD2AQ86YP4 633 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 HIPK1Q86Z02 1210 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 PPCDCQ96CD2 204 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 KLRG1Q96E93 195 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 VMP1Q96GC9 406 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 FNDC11Q9BVV2 318 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 ABI3Q9P2A4 366 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 SLC45A1Q9Y2W3 748 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 Q9Y3F1 56 aa10.75□□□□□ -0.69
ACTN1-216ENST00000556083 FAM237BA0A1B0GVD1 139 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 LRRC72A6NJI9 287 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 CLDN4O14493 209 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 MAP2K7O14733 419 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 KLRC4O43908 158 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 TMCC2O75069 709 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 MAP3K6O95382 1288 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 SLC6A2P23975 617 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 FLT3P36888 993 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 BLKP51451 505 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 CACNG1Q06432 222 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 DCTN2Q13561 401 aaKnown RBP10.74□□□□□ -0.69
ACTN1-216ENST00000556083 FAM189A2Q15884 450 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 DRICH1Q6PGQ1 229 aaPredicted RBP10.74□□□□□ -0.69
ACTN1-216ENST00000556083 CXCL17Q6UXB2 119 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 LBX2Q6XYB7 198 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 CHST15Q7LFX5 561 aaPredicted RBP10.74□□□□□ -0.69
ACTN1-216ENST00000556083 RD3Q7Z3Z2 195 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 FBXW8Q8N3Y1 598 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 GLB1L3Q8NCI6 653 aaPredicted RBP10.74□□□□□ -0.69
ACTN1-216ENST00000556083 CYP2W1Q8TAV3 490 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 RTKNQ9BST9 563 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 CHST7Q9NS84 486 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 DNAJC11Q9NVH1 559 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 RAPGEFL1Q9UHV5 662 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 A0A1B0GVM2 712 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 TCAF2A6NFQ2 919 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 SNPHO15079 494 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 DHX15O43143 795 aaKnown RBP10.74□□□□□ -0.69
ACTN1-216ENST00000556083 SUV39H1O43463 412 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 PKMP14618 531 aaKnown RBP10.74□□□□□ -0.69
ACTN1-216ENST00000556083 NDUFS1P28331 727 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 INAVAQ3KP66 663 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 XKR6Q5GH73 641 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 FBXO42Q6P3S6 717 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 ADGRG2Q8IZP9 1017 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 TTLQ8NG68 377 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 ZSCAN18Q8TBC5 510 aaPredicted RBP10.74□□□□□ -0.69
ACTN1-216ENST00000556083 CSPG4P5Q96PW8 444 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 KLHL25Q9H0H3 589 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 IL1RAPQ9NPH3 570 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 GULP1Q9UBP9 304 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 GMPPBQ9Y5P6 360 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 RIMS1Q86UR5 1692 aaKnown RBP10.74□□□□□ -0.69
ACTN1-216ENST00000556083 ADM5C9JUS6 153 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 KERAO60938 352 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 LRIG2O94898 1065 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 CCNYL3P0C7X3 344 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 DDX6P26196 483 aaKnown RBP eCLIP10.74□□□□□ -0.69
ACTN1-216ENST00000556083 SPAM1P38567 509 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 CDK9P50750 372 aaKnown RBP10.74□□□□□ -0.69
ACTN1-216ENST00000556083 WNT3AP56704 352 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 DDR1Q08345 913 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 AUHQ13825 339 aaKnown RBP10.74□□□□□ -0.69
ACTN1-216ENST00000556083 TEAD4Q15561 434 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 OTUD3Q5T2D3 398 aaPredicted RBP10.74□□□□□ -0.69
ACTN1-216ENST00000556083 TPGS2Q68CL5 300 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 ZNF57Q68EA5 555 aaPredicted RBP10.74□□□□□ -0.69
ACTN1-216ENST00000556083 VN1R5Q7Z5H4 357 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 DEFB132Q7Z7B7 95 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 RASGEF1CQ8N431 466 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 EFCAB3Q8N7B9 438 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 ADCY4Q8NFM4 1077 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 ZNF599Q96NL3 588 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 CNPPD1Q9BV87 410 aa10.74□□□□□ -0.69
ACTN1-216ENST00000556083 TDRD1Q9BXT4 1180 aaKnown RBP10.74□□□□□ -0.69
ACTN1-216ENST00000556083 KCNN2Q9H2S1 579 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms