RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 TAF1AQ15573 450 aaPredicted RBP10.23□□□□□ -0.77
SRP54-208ENST00000555557 UGP2Q16851 508 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 ZNF805Q5CZA5 627 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 TTC7BQ86TV6 843 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 KCNMB4Q86W47 210 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 CYP4X1Q8N118 509 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 TXNDC5Q8NBS9 432 aaKnown RBP10.23□□□□□ -0.77
SRP54-208ENST00000555557 OR4K2Q8NGD2 314 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 PIP4K2CQ8TBX8 421 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 PTCD2Q8WV60 388 aaKnown RBP10.23□□□□□ -0.77
SRP54-208ENST00000555557 HDAC10Q969S8 669 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 TBATAQ96M53 351 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 ACBD3Q9H3P7 528 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 MAGEE1Q9HCI5 957 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 IARS2Q9NSE4 1012 aaKnown RBP10.23□□□□□ -0.77
SRP54-208ENST00000555557 VPS18Q9P253 973 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 THEGQ9P2T0 379 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 RPL26L1Q9UNX3 145 aaKnown RBP10.23□□□□□ -0.77
SRP54-208ENST00000555557 FNDC3AQ9Y2H6 1198 aaKnown RBP10.23□□□□□ -0.77
SRP54-208ENST00000555557 ZNF711Q9Y462 761 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 COL4A2P08572 1712 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 C1orf232A0A0U1RR37 186 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 FAM159BA6NKW6 160 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 C2orf81A6NN90 581 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 H3BQF6 201 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 CRTAMO95727 393 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 PRNPP04156 253 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 MYZAPP0CAP1 466 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 GLULP15104 373 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 NTSR1P30989 418 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 MLF2Q15773 248 aaPredicted RBP10.23□□□□□ -0.77
SRP54-208ENST00000555557 CDKN3Q16667 212 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 KLHL38Q2WGJ6 581 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 KCTD16Q68DU8 428 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 CRTC1Q6UUV9 634 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 PARS2Q7L3T8 475 aaKnown RBP10.23□□□□□ -0.77
SRP54-208ENST00000555557 RASSF3Q86WH2 238 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 TTC30BQ8N4P2 665 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 ARRDC3Q96B67 414 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 SCRN2Q96FV2 425 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 LRIG1Q96JA1 1093 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 PAFAH2Q99487 392 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 SH3GL2Q99962 352 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 OSBPL1AQ9BXW6 950 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 GPR63Q9BZJ6 419 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 ROPN1BQ9BZX4 212 aaPredicted RBP10.23□□□□□ -0.77
SRP54-208ENST00000555557 ROPN1Q9HAT0 212 aaPredicted RBP10.23□□□□□ -0.77
SRP54-208ENST00000555557 TMBIM4Q9HC24 238 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 GGT7Q9UJ14 662 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 PSAT1Q9Y617 370 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 MYLKQ15746 1914 aa10.23□□□□□ -0.77
SRP54-208ENST00000555557 MUC22E2RYF6 1773 aaPredicted RBP10.22□□□□□ -0.77
SRP54-208ENST00000555557 TCF20Q9UGU0 1960 aaKnown RBP10.22□□□□□ -0.77
SRP54-208ENST00000555557 CAPN8A6NHC0 703 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 SYNCRIPO60506 623 aaKnown RBP10.22□□□□□ -0.77
SRP54-208ENST00000555557 TCEA3O75764 348 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 PAPSS2O95340 614 aaPredicted RBP10.22□□□□□ -0.77
SRP54-208ENST00000555557 LPOP22079 712 aaPredicted RBP10.22□□□□□ -0.77
SRP54-208ENST00000555557 LHCGRP22888 699 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 MSH2P43246 934 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 PSMD8P48556 350 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 ZNF140P52738 457 aaPredicted RBP10.22□□□□□ -0.77
SRP54-208ENST00000555557 POLR2LP62875 67 aaKnown RBP10.22□□□□□ -0.77
SRP54-208ENST00000555557 MGAT5Q09328 741 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 CCINQ13939 588 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 TTMPQ5BVD1 217 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 TEDDM1Q5T9Z0 273 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 LRRC66Q68CR7 880 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 BRAT1Q6PJG6 821 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 USP45Q70EL2 814 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 CYS1Q717R9 158 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 PTAR1Q7Z6K3 402 aaPredicted RBP10.22□□□□□ -0.77
SRP54-208ENST00000555557 LRRC6Q86X45 466 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 GOLGA6L1Q8N7Z2 621 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 TMIEQ8NEW7 156 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 OR6P1Q8NGX9 317 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 RPLP0P6Q8NHW5 317 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 STYXQ8WUJ0 223 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 DCAKDQ8WVC6 231 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 TMEM109Q9BVC6 243 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 COL25A1Q9BXS0 654 aaPredicted RBP10.22□□□□□ -0.77
SRP54-208ENST00000555557 SLC6A17Q9H1V8 727 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 ZFYVE1Q9HBF4 777 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 PCDH12Q9NPG4 1184 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 ZFATQ9P243 1243 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 B4GALT6Q9UBX8 382 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 SORCS3Q9UPU3 1222 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 ITM2BQ9Y287 266 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 PPIL1Q9Y3C6 166 aa10.22□□□□□ -0.77
SRP54-208ENST00000555557 MTF2Q9Y483 593 aaPredicted RBP10.22□□□□□ -0.77
SRP54-208ENST00000555557 BPTFQ12830 3046 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 A0A1W2PQF6 199 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 KRBA1A5PL33 1030 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 GOLGA6L10A6NI86 522 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 UPK3BL1B0FP48 263 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 UPK3BL2E5RIL1 263 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 STX7O15400 261 aaKnown RBP10.21□□□□□ -0.77
SRP54-208ENST00000555557 OPA1O60313 960 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 IVLP07476 585 aa10.21□□□□□ -0.77
SRP54-208ENST00000555557 PRSS56P0CW18 603 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms